Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400065013
CDS Infomation

pacid=37435621 polypeptide=PGSC0003DMP400043832 locus=PGSC0003DMG400025254 ID=PGSC0003DMT400065013.v4.03 annot-version=v4.03
Sequence

ATGGCTCTTGTGAGTAGAATTCCTTCAATTTCATCTTCTTCTGGAGCAATCCAATTGAGA
AAAATCAAATCTTTTGGTGTTAATCCTGTTTGCTGTATCAATTATGCATCACATTCTTCT
TCCCCTTTTACTGAGAAGCATTCAATTGAGAGATACCAAAGGGATAGTTGGATTTACAAG
AATGAATTGGAGCAACAATCTGGTTCTTGCCCAATTTTACCTGATCCTAGCTATGTTAGG
GACTATGACATAGCTTTGCAGCTACCTGAGCTGAAGAAAATGCTTCAGGTTTTGAGGGAG
AAGAGAGAAGGGGAAGGAGGGTGTGATAGAAAAGGGCCTGGGAATGTGTTCTTGGTGGGT
ACTGGACCAGGAGATCCTGAGTTGTTGACTGTTAAGGCTTTGAGAGTTATTCAGAATGCT
GATCTTTTGTTGTATGATAGATTGGTTTCTAATGAAGTCTTGGATTTGGTTGGTCCTGAT
GCTAGACTTCTCTATGTTGGTAAAACTGCTGGTTATCATAGCAGAACTCAGGAAGAAATT
CATGAGTTGCTTCTGAGTTTTGCTGAAGCTGGGGCAAATGTTGTGAGACTAAAAGGAGGT
GATCCGTTGGTATTTGGACGAGGAGGAGAAGAGATGGATTTTCTTCAACAAAAGGGAATT
CAAGTTAAAGTTATTCCAGGTATTACTGCAGCATCTGGGATATCGGCGGAGTTGGGAATT
CCATTAACCCATCGAGGTGTCGCAAATAGTGTTAGATTTCTCACTGGTCACTCGAGAAAA
GGAGGAACAGACCCACTTTTTGTTGCAGAGAATGCAGCTGACCCCGACTCCACATTAGTT
GTTTATATGGGCTTGTCAACTCTTCCTTCCCTGGCTTCAAAGCTCATACATCATGGGTTG
CCAACTGATACACCAGCTGTTGCCATTGAGCGAGGGACGACACCTCAACAACGCATGGTG
TTTGCAGAACTGAAGAATCTTGCTGATGATATCGTATCTCACCAGCTAGAGTCACCAACC
TTGATTATCATTGGGAAGGTGGTAGCTCTTTCACCATTATGGCCGAATTCCACTGAAGAG
ACTCCTATCTTGGTCGAGACAAATTCTTCAACCAACACATTGCAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400043832
PEP Infomation

pacid=37435621 transcript=PGSC0003DMT400065013 locus=PGSC0003DMG400025254 ID=PGSC0003DMT400065013.v4.03 annot-version=v4.03
Sequence

MALVSRIPSISSSSGAIQLRKIKSFGVNPVCCINYASHSSSPFTEKHSIERYQRDSWIYK
NELEQQSGSCPILPDPSYVRDYDIALQLPELKKMLQVLREKREGEGGCDRKGPGNVFLVG
TGPGDPELLTVKALRVIQNADLLLYDRLVSNEVLDLVGPDARLLYVGKTAGYHSRTQEEI
HELLLSFAEAGANVVRLKGGDPLVFGRGGEEMDFLQQKGIQVKVIPGITAASGISAELGI
PLTHRGVANSVRFLTGHSRKGGTDPLFVAENAADPDSTLVVYMGLSTLPSLASKLIHHGL
PTDTPAVAIERGTTPQQRMVFAELKNLADDIVSHQLESPTLIIIGKVVALSPLWPNSTEE
TPILVETNSSTNTLQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400065013
Transcript Infomation

pacid=37435621 locus=PGSC0003DMG400025254 ID=PGSC0003DMT400065013.v4.03 annot-version=v4.03
Sequence

ATGGCTCTTGTGAGTAGAATTCCTTCAATTTCATCTTCTTCTGGAGCAATCCAATTGAGA
AAAATCAAATCTTTTGGTGTTAATCCTGTTTGCTGTATCAATTATGCATCACATTCTTCT
TCCCCTTTTACTGAGAAGCATTCAATTGAGAGATACCAAAGGGATAGTTGGATTTACAAG
AATGAATTGGAGCAACAATCTGGTTCTTGCCCAATTTTACCTGATCCTAGCTATGTTAGG
GACTATGACATAGCTTTGCAGCTACCTGAGCTGAAGAAAATGCTTCAGGTTTTGAGGGAG
AAGAGAGAAGGGGAAGGAGGGTGTGATAGAAAAGGGCCTGGGAATGTGTTCTTGGTGGGT
ACTGGACCAGGAGATCCTGAGTTGTTGACTGTTAAGGCTTTGAGAGTTATTCAGAATGCT
GATCTTTTGTTGTATGATAGATTGGTTTCTAATGAAGTCTTGGATTTGGTTGGTCCTGAT
GCTAGACTTCTCTATGTTGGTAAAACTGCTGGTTATCATAGCAGAACTCAGGAAGAAATT
CATGAGTTGCTTCTGAGTTTTGCTGAAGCTGGGGCAAATGTTGTGAGACTAAAAGGAGGT
GATCCGTTGGTATTTGGACGAGGAGGAGAAGAGATGGATTTTCTTCAACAAAAGGGAATT
CAAGTTAAAGTTATTCCAGGTATTACTGCAGCATCTGGGATATCGGCGGAGTTGGGAATT
CCATTAACCCATCGAGGTGTCGCAAATAGTGTTAGATTTCTCACTGGTCACTCGAGAAAA
GGAGGAACAGACCCACTTTTTGTTGCAGAGAATGCAGCTGACCCCGACTCCACATTAGTT
GTTTATATGGGCTTGTCAACTCTTCCTTCCCTGGCTTCAAAGCTCATACATCATGGGTTG
CCAACTGATACACCAGCTGTTGCCATTGAGCGAGGGACGACACCTCAACAACGCATGGTG
TTTGCAGAACTGAAGAATCTTGCTGATGATATCGTATCTCACCAGCTAGAGTCACCAACC
TTGATTATCATTGGGAAGGTGGTAGCTCTTTCACCATTATGGCCGAATTCCACTGAAGAG
ACTCCTATCTTGGTCGAGACAAATTCTTCAACCAACACATTGCAATAG