Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064979
CDS Infomation

pacid=37435481 polypeptide=PGSC0003DMP400043812 locus=PGSC0003DMG400025240 ID=PGSC0003DMT400064979.v4.03 annot-version=v4.03
Sequence

ATGGCAGTGTCAAAAACCAACAAGAAGAAGCAGCAATGTTACATAGCAGTACCATCTCAA
ATAATAAATTCAATTTCTTCTTCAGGGCTTCAGTCTCTGTTACTGTCTCCAAAGAAAAAA
AACCCATCTTTTTCTGTAAAGTTCAAACTTTTACTTAATAATCCAAGATTCTGGGTTTTG
TTTCTTTTTGTTTTTGGGTTTGTTGGTATGTTGAAGTTGTGGTTCAATTTTGAAACTTTA
GTTCCTTTTGCACCAAACCCATGTGGGATTTTTCAAGAAAAGACTTCATTTTTAAATGAC
CATGAAGTTTCTCAGCTCAGTATTGGAGCTCTGAATCTTGGAAATGAAGAAAAAGAAGAA
GGGGATGAAAAGAGTGAATTTTGGAAACAACCTGATGGGTTGGGTTATAAGCCTTGTTTG
GATTTCAGTTCAGAGTATAGAAAAACAAGTTTGGATATTGTTAAAGGAAGGACTAGGTAC
TTGATGGTTGTGGTTTCTGGTGGAATGAATCAGCAGAGAAATCAGATTGTTGATGCTGTG
GTGATTGCAAGGATTCTTGGTGCTGCTCTTGTTGTTCCTATTTTGCAAGTTAATGTCATC
TGGGGTGATGAAAGTGAGTTCTCTGATATATTTGACTTGGATCACTTTAAGGAAGTATTA
GCAAATGATGTAAGAATAGTTTCATCACTTCCATCAACGCACGTAATGACTAGACCTGTG
GAGGAGAAAAGGACTCCTCTCCATGCCTCCCCCGAATGGATTCGTTCACATTATACCAGA
AAGCTTAGGAGGGATGGTGTTCTACTTTTGCGAAGCCTTGACTCGAGGCTGTCTAAGGAT
CTTCCTTCTGATCTTCAAAAACTTCGTTGCAAGGTGGCATTTCATGCTTTGCGGTTTTCG
CCATCAATCTTAGGACTTGGTAACAAACTTACTGAGAGGATGAGGAGCAAGGGACCATAT
GTTGCTCTTCATTTGAGAATGGAGAAGGATGTGTGGGTGAGAACAGGATGTCTTCCTGGT
TTAAGCCATGAGATTGATGAGATGATAAATAATGAGAGGAAGCGAAGGCCCGAGCTCTTA
ACTTCGCGTTCAAACATGACCTACCATGACAGAAAGCTTGCTGGTCTCTGCCCTTTGAAT
GCTTTGGAGGTTACAAGGTTGCTCAAAGCATTGGGAGCACCAAAGAGTGCAAGAATCTAT
TGGGCTGGAGGAATTCCTTTGGGTGGAAAAGAAGCATTGCAACCATTGACAAGTGAATTC
CCTCACTTCTTTAACAAAGAGGATCTTGCGTTGCCTGGGGAACTTGAGCCATTTGCCAAG
AAAGCATCCCTTATGGCTGCTCTTGACTACATAGTAACCGAGAATAGCAATGTTTTCATG
CCATCTCATGGTGGAAACATGGGACATGCTCTCCAGGGACAAAGGGCCTATGCAGGGCAC
AGAAAGACTATCACTCCCAACAAAAGACAGATGCTTCAACATTTTCTGAACTCATCACTT
TCTGAGACAGAATTCAACAGAATTATACTAGACTTGCATAGAGATTCCTTAGGTCAGCCA
GAATTGAGGAAAGCAGGAAGGGATGTGACAAAGTACCCTGTCCCAGAGTGCATGTGCAAT
GGTACTATGAACCATTCATCGACATAA

Peptide Sequence

PEP ID

PGSC0003DMP400043812
PEP Infomation

pacid=37435481 transcript=PGSC0003DMT400064979 locus=PGSC0003DMG400025240 ID=PGSC0003DMT400064979.v4.03 annot-version=v4.03
Sequence

MAVSKTNKKKQQCYIAVPSQIINSISSSGLQSLLLSPKKKNPSFSVKFKLLLNNPRFWVL
FLFVFGFVGMLKLWFNFETLVPFAPNPCGIFQEKTSFLNDHEVSQLSIGALNLGNEEKEE
GDEKSEFWKQPDGLGYKPCLDFSSEYRKTSLDIVKGRTRYLMVVVSGGMNQQRNQIVDAV
VIARILGAALVVPILQVNVIWGDESEFSDIFDLDHFKEVLANDVRIVSSLPSTHVMTRPV
EEKRTPLHASPEWIRSHYTRKLRRDGVLLLRSLDSRLSKDLPSDLQKLRCKVAFHALRFS
PSILGLGNKLTERMRSKGPYVALHLRMEKDVWVRTGCLPGLSHEIDEMINNERKRRPELL
TSRSNMTYHDRKLAGLCPLNALEVTRLLKALGAPKSARIYWAGGIPLGGKEALQPLTSEF
PHFFNKEDLALPGELEPFAKKASLMAALDYIVTENSNVFMPSHGGNMGHALQGQRAYAGH
RKTITPNKRQMLQHFLNSSLSETEFNRIILDLHRDSLGQPELRKAGRDVTKYPVPECMCN
GTMNHSST*

Transcript Sequence

Transcript ID

PGSC0003DMT400064979
Transcript Infomation

pacid=37435481 locus=PGSC0003DMG400025240 ID=PGSC0003DMT400064979.v4.03 annot-version=v4.03
Sequence

ATGGCAGTGTCAAAAACCAACAAGAAGAAGCAGCAATGTTACATAGCAGTACCATCTCAA
ATAATAAATTCAATTTCTTCTTCAGGGCTTCAGTCTCTGTTACTGTCTCCAAAGAAAAAA
AACCCATCTTTTTCTGTAAAGTTCAAACTTTTACTTAATAATCCAAGATTCTGGGTTTTG
TTTCTTTTTGTTTTTGGGTTTGTTGGTATGTTGAAGTTGTGGTTCAATTTTGAAACTTTA
GTTCCTTTTGCACCAAACCCATGTGGGATTTTTCAAGAAAAGACTTCATTTTTAAATGAC
CATGAAGTTTCTCAGCTCAGTATTGGAGCTCTGAATCTTGGAAATGAAGAAAAAGAAGAA
GGGGATGAAAAGAGTGAATTTTGGAAACAACCTGATGGGTTGGGTTATAAGCCTTGTTTG
GATTTCAGTTCAGAGTATAGAAAAACAAGTTTGGATATTGTTAAAGGAAGGACTAGGTAC
TTGATGGTTGTGGTTTCTGGTGGAATGAATCAGCAGAGAAATCAGATTGTTGATGCTGTG
GTGATTGCAAGGATTCTTGGTGCTGCTCTTGTTGTTCCTATTTTGCAAGTTAATGTCATC
TGGGGTGATGAAAGTGAGTTCTCTGATATATTTGACTTGGATCACTTTAAGGAAGTATTA
GCAAATGATGTAAGAATAGTTTCATCACTTCCATCAACGCACGTAATGACTAGACCTGTG
GAGGAGAAAAGGACTCCTCTCCATGCCTCCCCCGAATGGATTCGTTCACATTATACCAGA
AAGCTTAGGAGGGATGGTGTTCTACTTTTGCGAAGCCTTGACTCGAGGCTGTCTAAGGAT
CTTCCTTCTGATCTTCAAAAACTTCGTTGCAAGGTGGCATTTCATGCTTTGCGGTTTTCG
CCATCAATCTTAGGACTTGGTAACAAACTTACTGAGAGGATGAGGAGCAAGGGACCATAT
GTTGCTCTTCATTTGAGAATGGAGAAGGATGTGTGGGTGAGAACAGGATGTCTTCCTGGT
TTAAGCCATGAGATTGATGAGATGATAAATAATGAGAGGAAGCGAAGGCCCGAGCTCTTA
ACTTCGCGTTCAAACATGACCTACCATGACAGAAAGCTTGCTGGTCTCTGCCCTTTGAAT
GCTTTGGAGGTTACAAGGTTGCTCAAAGCATTGGGAGCACCAAAGAGTGCAAGAATCTAT
TGGGCTGGAGGAATTCCTTTGGGTGGAAAAGAAGCATTGCAACCATTGACAAGTGAATTC
CCTCACTTCTTTAACAAAGAGGATCTTGCGTTGCCTGGGGAACTTGAGCCATTTGCCAAG
AAAGCATCCCTTATGGCTGCTCTTGACTACATAGTAACCGAGAATAGCAATGTTTTCATG
CCATCTCATGGTGGAAACATGGGACATGCTCTCCAGGGACAAAGGGCCTATGCAGGGCAC
AGAAAGACTATCACTCCCAACAAAAGACAGATGCTTCAACATTTTCTGAACTCATCACTT
TCTGAGACAGAATTCAACAGAATTATACTAGACTTGCATAGAGATTCCTTAGGTCAGCCA
GAATTGAGGAAAGCAGGAAGGGATGTGACAAAGTACCCTGTCCCAGAGTGCATGTGCAAT
GGTACTATGAACCATTCATCGACATAA