Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064888
CDS Infomation

pacid=37468661 polypeptide=PGSC0003DMP400043748 locus=PGSC0003DMG400025198 ID=PGSC0003DMT400064888.v4.03 annot-version=v4.03
Sequence

ATGAATCCTCAGACCTTCATTAGGCTCTCAATAGGGTCACTGGGGTTGAGAGTGCCTGGA
ATAACATTAAATGGTGCAAAATCAGGGAGAAGTGCATTATCTTTTCCTTGTGTGTGCGAG
ATCCGTCTTCGTGGTTTCCCTGTGCAAACAGCAATAATTCCATTGGTATCTTCTCCTGAA
ACTACTCCAGATTCTAACAATATCGCCTCCAGTTTTTATCTTCAAGAATCTGATTTGAAA
GCATTACTGGCACCTGGCTGTTTATTAAAGCATCATGCATGTCTAGAGATAGTTGTTTTC
ACAGGACACAATGAAAGTCACTGCGGTATTAGTATTAAAAGGCAGCATATTGGGACGTTT
AAGCTGGAAGTAGGTCCTGAGTGGGGTAATGGAAGGCCAGTCATTCTGTTCAATGGTTGG
ATACACATTGGCAAGAACAAGTGGCTGGATGGAATAGCTGGAGCAGAGCTTCATTTGAGA
GTGAAGCTAGATCCAGATCCAAGATATATTTTCCAGTTTAAAGATAAGACCAAACTAAGT
CCACAAATAATTCAGCTTCAAGGAACCATCAAGCAGCCTATTTTTAGTTGCAAATTTAGC
CAAGACCGGGTATCTCCACGAGACCCATTGAGTAATTTTTGGTCTAGCTCTTTTGATGGT
TCTGAACTAGACATTGGAAAAAGAGAGAGGAAAGGATGGAATGTGAAGATACATGATCTC
TCTGGCTCGGCTGTTGCAGCAGCCTTCATAACAACTCCTTTTGTGCCGTCAACAGGTTGT
GATTGGGTTGCCAGATCCAACCCAGGAGCTTGGTTGATTGTTCGTTCTGATGTTTGCAGG
CCTGAAAGCTGGCATCCATGGGGAAAGCTTGAAGCATGGCGTGAACGTGGGATCAGAGAC
TCCATTTGCTGTCGGTTTCATCTACTAACAGAGGGTCACGAATTGGGGGATCTTCTTATG
TCTGAGATCTTGATCAGCGCTGAAAAGGGTGGGGAGTTCTACATAGACACGGACAAACAG
GTTAGAGCAGCATCGACTCCAATGCATAGTCCAAGAGGGAGTGGAGACTTTGCGGCAGTA
AGTCTTGCAGCAGAGGGTTTTGTGATGAGCTGTCGGGTGCAAGGGGAAGGGAAATGCAGC
AAGCCCCTTGTGCAGCTTGCGATGCGACATGTGACTTGTGTGGAGGATGTTGGGATTTTC
ATGGCTCTTGCAGCTGCAGTTGATCTGAGCATTGAAGCATGCAGGCCCTTCCGTAGAAGG
CTTAGAAGAAGTGCTAGCCATTCCTGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400043748
PEP Infomation

pacid=37468661 transcript=PGSC0003DMT400064888 locus=PGSC0003DMG400025198 ID=PGSC0003DMT400064888.v4.03 annot-version=v4.03
Sequence

MNPQTFIRLSIGSLGLRVPGITLNGAKSGRSALSFPCVCEIRLRGFPVQTAIIPLVSSPE
TTPDSNNIASSFYLQESDLKALLAPGCLLKHHACLEIVVFTGHNESHCGISIKRQHIGTF
KLEVGPEWGNGRPVILFNGWIHIGKNKWLDGIAGAELHLRVKLDPDPRYIFQFKDKTKLS
PQIIQLQGTIKQPIFSCKFSQDRVSPRDPLSNFWSSSFDGSELDIGKRERKGWNVKIHDL
SGSAVAAAFITTPFVPSTGCDWVARSNPGAWLIVRSDVCRPESWHPWGKLEAWRERGIRD
SICCRFHLLTEGHELGDLLMSEILISAEKGGEFYIDTDKQVRAASTPMHSPRGSGDFAAV
SLAAEGFVMSCRVQGEGKCSKPLVQLAMRHVTCVEDVGIFMALAAAVDLSIEACRPFRRR
LRRSASHSW*

Transcript Sequence

Transcript ID

PGSC0003DMT400064888
Transcript Infomation

pacid=37468661 locus=PGSC0003DMG400025198 ID=PGSC0003DMT400064888.v4.03 annot-version=v4.03
Sequence

ATGAATCCTCAGACCTTCATTAGGCTCTCAATAGGGTCACTGGGGTTGAGAGTGCCTGGA
ATAACATTAAATGGTGCAAAATCAGGGAGAAGTGCATTATCTTTTCCTTGTGTGTGCGAG
ATCCGTCTTCGTGGTTTCCCTGTGCAAACAGCAATAATTCCATTGGTATCTTCTCCTGAA
ACTACTCCAGATTCTAACAATATCGCCTCCAGTTTTTATCTTCAAGAATCTGATTTGAAA
GCATTACTGGCACCTGGCTGTTTATTAAAGCATCATGCATGTCTAGAGATAGTTGTTTTC
ACAGGACACAATGAAAGTCACTGCGGTATTAGTATTAAAAGGCAGCATATTGGGACGTTT
AAGCTGGAAGTAGGTCCTGAGTGGGGTAATGGAAGGCCAGTCATTCTGTTCAATGGTTGG
ATACACATTGGCAAGAACAAGTGGCTGGATGGAATAGCTGGAGCAGAGCTTCATTTGAGA
GTGAAGCTAGATCCAGATCCAAGATATATTTTCCAGTTTAAAGATAAGACCAAACTAAGT
CCACAAATAATTCAGCTTCAAGGAACCATCAAGCAGCCTATTTTTAGTTGCAAATTTAGC
CAAGACCGGGTATCTCCACGAGACCCATTGAGTAATTTTTGGTCTAGCTCTTTTGATGGT
TCTGAACTAGACATTGGAAAAAGAGAGAGGAAAGGATGGAATGTGAAGATACATGATCTC
TCTGGCTCGGCTGTTGCAGCAGCCTTCATAACAACTCCTTTTGTGCCGTCAACAGGTTGT
GATTGGGTTGCCAGATCCAACCCAGGAGCTTGGTTGATTGTTCGTTCTGATGTTTGCAGG
CCTGAAAGCTGGCATCCATGGGGAAAGCTTGAAGCATGGCGTGAACGTGGGATCAGAGAC
TCCATTTGCTGTCGGTTTCATCTACTAACAGAGGGTCACGAATTGGGGGATCTTCTTATG
TCTGAGATCTTGATCAGCGCTGAAAAGGGTGGGGAGTTCTACATAGACACGGACAAACAG
GTTAGAGCAGCATCGACTCCAATGCATAGTCCAAGAGGGAGTGGAGACTTTGCGGCAGTA
AGTCTTGCAGCAGAGGGTTTTGTGATGAGCTGTCGGGTGCAAGGGGAAGGGAAATGCAGC
AAGCCCCTTGTGCAGCTTGCGATGCGACATGTGACTTGTGTGGAGGATGTTGGGATTTTC
ATGGCTCTTGCAGCTGCAGTTGATCTGAGCATTGAAGCATGCAGGCCCTTCCGTAGAAGG
CTTAGAAGAAGTGCTAGCCATTCCTGGTGA