Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064875
CDS Infomation

pacid=37441581 polypeptide=PGSC0003DMP400043738 locus=PGSC0003DMG400025190 ID=PGSC0003DMT400064875.v4.03 annot-version=v4.03
Sequence

ATGAGTTCGCCGGAAAATGAAACCCCTCGTGGCGTCCAATCGGGTTTCTGCAAAGAGGAT
CAAGCTAGAAAGTGTACAGTACAGCCAGTAGTCATTGGGGGTATGGTGTTGGATGTAAAT
GCAACATCTTCCATGCATGCTAATCCAAGGACCACCACTCCCGGAAAGGTTATCTTTTCA
TTAGGTGGTGTGGCAAGGAACGTTGCTGACTGCATCTCGAAGCTTGAATCGAGACCATTT
ATGATAAGTGCTGTTGGATTTGACATGGCAGGAAATATGCTACTGGAACACTGGGAATCT
GCTGGATTATCTATAGAAGGTATCCAGAGACATCAGAATATTGAAACTGCTGTTGTTTGT
CATATCTTTGATGAGAAAGGTGAAGTGGCAGCTGGTGTAGCTCATGTAGAGTCAATTGAA
CAGTTTCTCACTCCAAGGTGGATAGAAAAGTTCAAGTGCAAAATAAGCTGCAGTCCAATA
TTGATGGTTGATGCAAACTTGACCTCTTCTTCTCTTGAAGCATCTTGTCAACTGGCTGCT
CAGTTTAATACTCCAGTATGGTTTGAGCCTGTATCAGTTGCCAAATCTAGAAGAGTTGCT
TCAGTTGTTCAGTATGTAACTTTTGCATCACCTAATGAAGATGAACTTGTAGCCATGGCA
AATGCAGTATCTGGCAAAGAGATATTTCAACCAATTCGGAGAGATGATAGTAGTACTAAG
CTGTCCAAGGAATATTTCTTCCAAACGCTTAAACCTGCTATTTGGGTTTTGCTAGACAAA
GGTGTTAAGGTACTTGTTGTAACACTTGGATCAGAAGGGGTACTCGTATGCTCCAAAGCA
AAGTTCAATCTTCAGAGACTTGCTTTCAAAGGAAACCAATCCCCCTACTTCAGTAAGCAG
TTGTATGAAGCTGTTAGTACAGTTTGCCCAAAGGACAAAATTTTTGGTGCTTCAATGTGC
ATGCCGATGTCAGATCTTTTTGCTGTCCATTTTCCTGCACTTCCTGCTTCAGTAGTGAGG
CTTACAGGTGCTGGAGATTGTTTAGTTGGTGGAACGATAGCTTCTTTGTGTGCTGGTTTA
GATGTCATGCAAAGTATAGCAGTTGGGATTGCGGCTGCTAAAGTAGTTGTTGAAGTAGAA
AGCAATGTCCCTGATGAATATTGTTTGGCCAAACTAGCAGATGATGCAAGGTCTGTCTAC
TCCGGTGCCACCATGCTTCTGTGTCAATCCAAGTTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400043738
PEP Infomation

pacid=37441581 transcript=PGSC0003DMT400064875 locus=PGSC0003DMG400025190 ID=PGSC0003DMT400064875.v4.03 annot-version=v4.03
Sequence

MSSPENETPRGVQSGFCKEDQARKCTVQPVVIGGMVLDVNATSSMHANPRTTTPGKVIFS
LGGVARNVADCISKLESRPFMISAVGFDMAGNMLLEHWESAGLSIEGIQRHQNIETAVVC
HIFDEKGEVAAGVAHVESIEQFLTPRWIEKFKCKISCSPILMVDANLTSSSLEASCQLAA
QFNTPVWFEPVSVAKSRRVASVVQYVTFASPNEDELVAMANAVSGKEIFQPIRRDDSSTK
LSKEYFFQTLKPAIWVLLDKGVKVLVVTLGSEGVLVCSKAKFNLQRLAFKGNQSPYFSKQ
LYEAVSTVCPKDKIFGASMCMPMSDLFAVHFPALPASVVRLTGAGDCLVGGTIASLCAGL
DVMQSIAVGIAAAKVVVEVESNVPDEYCLAKLADDARSVYSGATMLLCQSKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400064875
Transcript Infomation

pacid=37441581 locus=PGSC0003DMG400025190 ID=PGSC0003DMT400064875.v4.03 annot-version=v4.03
Sequence

ATGAGTTCGCCGGAAAATGAAACCCCTCGTGGCGTCCAATCGGGTTTCTGCAAAGAGGAT
CAAGCTAGAAAGTGTACAGTACAGCCAGTAGTCATTGGGGGTATGGTGTTGGATGTAAAT
GCAACATCTTCCATGCATGCTAATCCAAGGACCACCACTCCCGGAAAGGTTATCTTTTCA
TTAGGTGGTGTGGCAAGGAACGTTGCTGACTGCATCTCGAAGCTTGAATCGAGACCATTT
ATGATAAGTGCTGTTGGATTTGACATGGCAGGAAATATGCTACTGGAACACTGGGAATCT
GCTGGATTATCTATAGAAGGTATCCAGAGACATCAGAATATTGAAACTGCTGTTGTTTGT
CATATCTTTGATGAGAAAGGTGAAGTGGCAGCTGGTGTAGCTCATGTAGAGTCAATTGAA
CAGTTTCTCACTCCAAGGTGGATAGAAAAGTTCAAGTGCAAAATAAGCTGCAGTCCAATA
TTGATGGTTGATGCAAACTTGACCTCTTCTTCTCTTGAAGCATCTTGTCAACTGGCTGCT
CAGTTTAATACTCCAGTATGGTTTGAGCCTGTATCAGTTGCCAAATCTAGAAGAGTTGCT
TCAGTTGTTCAGTATGTAACTTTTGCATCACCTAATGAAGATGAACTTGTAGCCATGGCA
AATGCAGTATCTGGCAAAGAGATATTTCAACCAATTCGGAGAGATGATAGTAGTACTAAG
CTGTCCAAGGAATATTTCTTCCAAACGCTTAAACCTGCTATTTGGGTTTTGCTAGACAAA
GGTGTTAAGGTACTTGTTGTAACACTTGGATCAGAAGGGGTACTCGTATGCTCCAAAGCA
AAGTTCAATCTTCAGAGACTTGCTTTCAAAGGAAACCAATCCCCCTACTTCAGTAAGCAG
TTGTATGAAGCTGTTAGTACAGTTTGCCCAAAGGACAAAATTTTTGGTGCTTCAATGTGC
ATGCCGATGTCAGATCTTTTTGCTGTCCATTTTCCTGCACTTCCTGCTTCAGTAGTGAGG
CTTACAGGTGCTGGAGATTGTTTAGTTGGTGGAACGATAGCTTCTTTGTGTGCTGGTTTA
GATGTCATGCAAAGTATAGCAGTTGGGATTGCGGCTGCTAAAGTAGTTGTTGAAGTAGAA
AGCAATGTCCCTGATGAATATTGTTTGGCCAAACTAGCAGATGATGCAAGGTCTGTCTAC
TCCGGTGCCACCATGCTTCTGTGTCAATCCAAGTTGTAG