Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064730
CDS Infomation

pacid=37428886 polypeptide=PGSC0003DMP400043638 locus=PGSC0003DMG400025145 ID=PGSC0003DMT400064730.v4.03 annot-version=v4.03
Sequence

ATGACGGAGGATAATTGCCCTAGAGTTTCATCTTCTGAAACCGTAGACTCCAATTCTTCA
TCAACGAAGCAAAGGAAACGGAGAAAGTGGGATCAGCCTGCGGAGACATTTGTTCCAGAA
GGGGTAGCAGTATCTGGGATTTTTCCATTGGTAAATACTGGTTCTCTTGCTGGTATCACA
CTACCTGGCGTAATTCCAGTCTTGGGTGCTGCTTTTACGAATCCTCTTACCGCTATTGGT
GCTACTACAGTGCAGCAGCTTCCCGTAATTATTGCCCAAAAATCAGTTCAACCGAAAATT
CAGGATGAGTTGATAGCAAGAGAAATTGTCATTAATGATGCTGATCCGTCTGTTCGCTAC
AGGCTCACAAAGCGCCAAACACAGGAAGAGATTCAGAAGAGCACGGGTGCTGTGGTTATA
ACTAGGGGTAAATACAAGCCTCCAAGCGCACCATCCGATGGTGAAAAACCCCTATACCTT
CATATTTCTGCAGGGGCACATCTAGAAACAACACTTGAGAGGATCAGAGCAGTTGATCGT
GCTGCTGCTGTAGTGGAGGAAATGCTTAAGCAAAGTCCTGTTAACAATGGATTAAAGGTT
AATCATCTGCTGAGTACCTGTGTGTACCTGGGCTTTGAGGCTGATCCATCAGCAAATATT
ACTGTGCGCATTCGTGGACCAAATGATCAGTATATAAATCACATTATGAATGAAACTGGA
GCAACTGTCTTGCTAAGAGGACGTGGTTCGGGATATTCAGATGAAGGAGAGGGAGAAGAT
GTGCACCAACCTCTGCATTTACTCATATCAAGCAATAACAGTGCAAGTCTTGAGCGTGCG
AAGCTTTTGGCAGAAAATCTTTTGGATACTATTTGTGCAGAGTGTGGTGCTTCTAGAGTC
TCTTCTTGTAAGGTTTATGGAGCTGTTCCGCCTCCACTGCAACCGTTAGCCAGCGTTCAG
GTTTCTGGAAGTGAATCAGAAGTCAATAACATACCCACAGCCAATGTAGCTGCACAGATT
TTGAGCTTCTCAACAGCAGCAGCAGTTCCCGTGACTGCAGCTGCAGGTGTGACTGGTGTT
GTTTCTCAGGGTACAGTACCTCAATCTCTAGGCTCACTGAATCCTGTGCCATCTCAACCT
CCCACCAGTTGCTATCCTCATCAATTAGTTGCAAGTAGAACAAGCTATATTGGTTATGAT
GGTATATATCCCCAAGCCACTGCTTTGCAGCAAGTTGCTTTGGCTCTTAGGCAATCTACT
TCTCCAGTCACTACCACAGTTCCTCCAGCAACAACGGGACCAAGCATCACTTCACAGACA
AGTACAGGTACTGAGAAGGACAAGCGCCCTGCACAGAAGCGTAAATTTCAAGAATTGCCG
GCTGGTGGAAAAGGCCAATCAACTGTAAACCAGAATCCACTGCAGGGTACGGAGCTTCTA
ATGCTTCAGGAACGAATGTCAGACAAAGGTGATAGAGACAAAATTGGTACTCCGGCTCCC
AGAAAGTTGGTTCAGCCCTTATCCAGTTCAATGCTGCCGCCGCCACCTCCTAGAATGATG
CCTCCACTGCCACCGCCACCAAAGTTTCAATCATCCTCACAGAAAGTGCATGACAACAAT
GTGGTTAATAAAGCACCATGTAAAATTGTTCCAGATACATTAGTCCAGCTAATGGAATAT
GGGGATGACGACGACGATGATAATGATGAAGCAATTGACGGACCTTTGAAATGTAGCTCA
AGTGCGGTAGCAACTCCAAAGCCATTCTGGGCTGTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400043638
PEP Infomation

pacid=37428886 transcript=PGSC0003DMT400064730 locus=PGSC0003DMG400025145 ID=PGSC0003DMT400064730.v4.03 annot-version=v4.03
Sequence

MTEDNCPRVSSSETVDSNSSSTKQRKRRKWDQPAETFVPEGVAVSGIFPLVNTGSLAGIT
LPGVIPVLGAAFTNPLTAIGATTVQQLPVIIAQKSVQPKIQDELIAREIVINDADPSVRY
RLTKRQTQEEIQKSTGAVVITRGKYKPPSAPSDGEKPLYLHISAGAHLETTLERIRAVDR
AAAVVEEMLKQSPVNNGLKVNHLLSTCVYLGFEADPSANITVRIRGPNDQYINHIMNETG
ATVLLRGRGSGYSDEGEGEDVHQPLHLLISSNNSASLERAKLLAENLLDTICAECGASRV
SSCKVYGAVPPPLQPLASVQVSGSESEVNNIPTANVAAQILSFSTAAAVPVTAAAGVTGV
VSQGTVPQSLGSLNPVPSQPPTSCYPHQLVASRTSYIGYDGIYPQATALQQVALALRQST
SPVTTTVPPATTGPSITSQTSTGTEKDKRPAQKRKFQELPAGGKGQSTVNQNPLQGTELL
MLQERMSDKGDRDKIGTPAPRKLVQPLSSSMLPPPPPRMMPPLPPPPKFQSSSQKVHDNN
VVNKAPCKIVPDTLVQLMEYGDDDDDDNDEAIDGPLKCSSSAVATPKPFWAV*

Transcript Sequence

Transcript ID

PGSC0003DMT400064730
Transcript Infomation

pacid=37428886 locus=PGSC0003DMG400025145 ID=PGSC0003DMT400064730.v4.03 annot-version=v4.03
Sequence

ATGACGGAGGATAATTGCCCTAGAGTTTCATCTTCTGAAACCGTAGACTCCAATTCTTCA
TCAACGAAGCAAAGGAAACGGAGAAAGTGGGATCAGCCTGCGGAGACATTTGTTCCAGAA
GGGGTAGCAGTATCTGGGATTTTTCCATTGGTAAATACTGGTTCTCTTGCTGGTATCACA
CTACCTGGCGTAATTCCAGTCTTGGGTGCTGCTTTTACGAATCCTCTTACCGCTATTGGT
GCTACTACAGTGCAGCAGCTTCCCGTAATTATTGCCCAAAAATCAGTTCAACCGAAAATT
CAGGATGAGTTGATAGCAAGAGAAATTGTCATTAATGATGCTGATCCGTCTGTTCGCTAC
AGGCTCACAAAGCGCCAAACACAGGAAGAGATTCAGAAGAGCACGGGTGCTGTGGTTATA
ACTAGGGGTAAATACAAGCCTCCAAGCGCACCATCCGATGGTGAAAAACCCCTATACCTT
CATATTTCTGCAGGGGCACATCTAGAAACAACACTTGAGAGGATCAGAGCAGTTGATCGT
GCTGCTGCTGTAGTGGAGGAAATGCTTAAGCAAAGTCCTGTTAACAATGGATTAAAGGTT
AATCATCTGCTGAGTACCTGTGTGTACCTGGGCTTTGAGGCTGATCCATCAGCAAATATT
ACTGTGCGCATTCGTGGACCAAATGATCAGTATATAAATCACATTATGAATGAAACTGGA
GCAACTGTCTTGCTAAGAGGACGTGGTTCGGGATATTCAGATGAAGGAGAGGGAGAAGAT
GTGCACCAACCTCTGCATTTACTCATATCAAGCAATAACAGTGCAAGTCTTGAGCGTGCG
AAGCTTTTGGCAGAAAATCTTTTGGATACTATTTGTGCAGAGTGTGGTGCTTCTAGAGTC
TCTTCTTGTAAGGTTTATGGAGCTGTTCCGCCTCCACTGCAACCGTTAGCCAGCGTTCAG
GTTTCTGGAAGTGAATCAGAAGTCAATAACATACCCACAGCCAATGTAGCTGCACAGATT
TTGAGCTTCTCAACAGCAGCAGCAGTTCCCGTGACTGCAGCTGCAGGTGTGACTGGTGTT
GTTTCTCAGGGTACAGTACCTCAATCTCTAGGCTCACTGAATCCTGTGCCATCTCAACCT
CCCACCAGTTGCTATCCTCATCAATTAGTTGCAAGTAGAACAAGCTATATTGGTTATGAT
GGTATATATCCCCAAGCCACTGCTTTGCAGCAAGTTGCTTTGGCTCTTAGGCAATCTACT
TCTCCAGTCACTACCACAGTTCCTCCAGCAACAACGGGACCAAGCATCACTTCACAGACA
AGTACAGGTACTGAGAAGGACAAGCGCCCTGCACAGAAGCGTAAATTTCAAGAATTGCCG
GCTGGTGGAAAAGGCCAATCAACTGTAAACCAGAATCCACTGCAGGGTACGGAGCTTCTA
ATGCTTCAGGAACGAATGTCAGACAAAGGTGATAGAGACAAAATTGGTACTCCGGCTCCC
AGAAAGTTGGTTCAGCCCTTATCCAGTTCAATGCTGCCGCCGCCACCTCCTAGAATGATG
CCTCCACTGCCACCGCCACCAAAGTTTCAATCATCCTCACAGAAAGTGCATGACAACAAT
GTGGTTAATAAAGCACCATGTAAAATTGTTCCAGATACATTAGTCCAGCTAATGGAATAT
GGGGATGACGACGACGATGATAATGATGAAGCAATTGACGGACCTTTGAAATGTAGCTCA
AGTGCGGTAGCAACTCCAAAGCCATTCTGGGCTGTTTAA