Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064691
CDS Infomation

pacid=37444557 polypeptide=PGSC0003DMP400043610 locus=PGSC0003DMG400025127 ID=PGSC0003DMT400064691.v4.03 annot-version=v4.03
Sequence

ATGGAGATTCTTATTGAGCTCAAAGATGCATTGATCAAACAACAATATGATAAAGGAACT
TCTTCAGGCCAAAATATCAAAGATGATGAGTTAATCTCAGCCACCATTTCTTGTGATGAA
GAGTCCAACAAAGACAGAACAGAACAAGAACAGGACATTGAGAACTCAATAGATCAAGTG
ATACTAGACTCTCCAAGATCAAGTGAGCTAGGCAATCCAACTAACATCAATACAGAAGAC
AATAAATCGAAGAGTTCATCTGAACGAGCGATCAATAACCAGGGAAAAAGCTTAAAGATT
CACATTCCTCTAACGAATCCAACACGAACATTCTCAGCTATAACTTATTTGCTTAGGGAT
GATATGATCAATCAATCCTCCAAGAAATGTGGTCCTAACGGACGACAAAAGTTGCACATC
AATAGAACAAAGCTAAAACACGCGGAGAAGATGATTAGAGGAGCCTTCATTGAGCTCTAC
AAGGGACTAGAATACCTTAAAATTTATCGGAACTTGAACATGCTTGCTTTTGTAAAGATC
TTGAAGAAATTTGACAAAGTTACAAACAAACAAGTTCTTCCTATTTATCTAAGAGTTGTG
GAGAGCTCTTACTTCAACAGCTCAGACAAGGCTTTGAAGTTGGCTGATGAAGTTGAGGAG
ATTTTCATCAAACACTTTGCTGAAGATGATAAAAAGAAGGCTATGAAGTACTTAAAGCCA
ACTCAGAAAAAAGAATCTCATGCTGTTACCTTTTTCATCGCTCAAACTAAGGAACTCAAG
TACAGAGATGTGTTCCTTATATGTACTACATCGATGACTGCTGTTATCGGAGTCCTGTTT
CTCCATCTAACGCTTGTAGCAAAAGGGTATTCCTATAATCAAATTCAAGCAATTCCTGCC
CTCCTATTATTGGTCTTTATTTTGCTGCTGGTGTGCCCATTCAACATCATATACAAATCT
AGCCGTTATCGATTCATTCGTGTTATAAGGAACATCATGTTTTCACCTTTGTATAAGGTT
GTCATGTTGGACTTCTTCATGGCTGATCAACTTTGTAGCCAGGTTCCAATGCTAAGAAAC
CTTGAATATGTAGCATGCTATTACATAACTGGAAGTTACAAAACTCAAGATTATGGATAC
TGTATGAGGACAAAATATTATAGAGACCTTGCTTATGCAGTTTCTTTCTTGCCATATTAC
TGGAGAGCTATGCAGTGTGCACGAAGATGGTTCGATGAAGGACACAAAAGCCACCTAGTC
AACTTAGGAAAATATGTGTCTGCAATGTTGGCTGCTGGTGCAAAAGTTGCATATGAAAAA
GAAAAGAATATGGGATGGCTTTGTTTAGTTATAGTCATGTCAAGTGTTGCAACTGTATAC
CAATTATACTGGGATTTTGTTAAAGATTGGGGCTTGCTTCAATGTCATTCCAAGAATCCT
TGGTTAAGGAATGAATTGATGCTACGACGAAAATTTATCTACTACTTCTCCATGGGATTG
AACCTTGTGTTGAGACTAGCATGGTTACAAACAGTACTTCATTACAATTTTGGAACTGTA
GACTACAGGGTAACAGGGCTATTTTTAGCAGCCCTTGAAGTCATTAGAAGAGGACATTGG
AATTATTACAGGTCAAGTACTATTTATGGGAAGAGGAGAGCATCAGAACATTTGTCCCAG
CTTCCAATTATTTCTTGTGTAGTGGAAGATAGTTCTGAAACACAACCAGAATCTGTGAAT
TCATCTGCTTCAAGTGATTCTTCAAAGGAAGCAGTTTTTGACATGAAATTACCAAGAAGA
AGTCTGTTAGCAACATTCACATGTAATGCTTGTGGTGCTCGATCGCAAAGACTCATAAAC
AGATTAGCATATGAAAGAGGGACTGTGTTTATACAGTGTTCAGGCTGCTCTCAGTATCAC
AAATTAGTTGACAACCTTGGACTTGTGGTTGAGTACAACTTCAAGGATGAAATTAGTATG
GATCCAGATGCTGATCAAGATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400043610
PEP Infomation

pacid=37444557 transcript=PGSC0003DMT400064691 locus=PGSC0003DMG400025127 ID=PGSC0003DMT400064691.v4.03 annot-version=v4.03
Sequence

MEILIELKDALIKQQYDKGTSSGQNIKDDELISATISCDEESNKDRTEQEQDIENSIDQV
ILDSPRSSELGNPTNINTEDNKSKSSSERAINNQGKSLKIHIPLTNPTRTFSAITYLLRD
DMINQSSKKCGPNGRQKLHINRTKLKHAEKMIRGAFIELYKGLEYLKIYRNLNMLAFVKI
LKKFDKVTNKQVLPIYLRVVESSYFNSSDKALKLADEVEEIFIKHFAEDDKKKAMKYLKP
TQKKESHAVTFFIAQTKELKYRDVFLICTTSMTAVIGVLFLHLTLVAKGYSYNQIQAIPA
LLLLVFILLLVCPFNIIYKSSRYRFIRVIRNIMFSPLYKVVMLDFFMADQLCSQVPMLRN
LEYVACYYITGSYKTQDYGYCMRTKYYRDLAYAVSFLPYYWRAMQCARRWFDEGHKSHLV
NLGKYVSAMLAAGAKVAYEKEKNMGWLCLVIVMSSVATVYQLYWDFVKDWGLLQCHSKNP
WLRNELMLRRKFIYYFSMGLNLVLRLAWLQTVLHYNFGTVDYRVTGLFLAALEVIRRGHW
NYYRSSTIYGKRRASEHLSQLPIISCVVEDSSETQPESVNSSASSDSSKEAVFDMKLPRR
SLLATFTCNACGARSQRLINRLAYERGTVFIQCSGCSQYHKLVDNLGLVVEYNFKDEISM
DPDADQD*

Transcript Sequence

Transcript ID

PGSC0003DMT400064691
Transcript Infomation

pacid=37444557 locus=PGSC0003DMG400025127 ID=PGSC0003DMT400064691.v4.03 annot-version=v4.03
Sequence

ATGGAGATTCTTATTGAGCTCAAAGATGCATTGATCAAACAACAATATGATAAAGGAACT
TCTTCAGGCCAAAATATCAAAGATGATGAGTTAATCTCAGCCACCATTTCTTGTGATGAA
GAGTCCAACAAAGACAGAACAGAACAAGAACAGGACATTGAGAACTCAATAGATCAAGTG
ATACTAGACTCTCCAAGATCAAGTGAGCTAGGCAATCCAACTAACATCAATACAGAAGAC
AATAAATCGAAGAGTTCATCTGAACGAGCGATCAATAACCAGGGAAAAAGCTTAAAGATT
CACATTCCTCTAACGAATCCAACACGAACATTCTCAGCTATAACTTATTTGCTTAGGGAT
GATATGATCAATCAATCCTCCAAGAAATGTGGTCCTAACGGACGACAAAAGTTGCACATC
AATAGAACAAAGCTAAAACACGCGGAGAAGATGATTAGAGGAGCCTTCATTGAGCTCTAC
AAGGGACTAGAATACCTTAAAATTTATCGGAACTTGAACATGCTTGCTTTTGTAAAGATC
TTGAAGAAATTTGACAAAGTTACAAACAAACAAGTTCTTCCTATTTATCTAAGAGTTGTG
GAGAGCTCTTACTTCAACAGCTCAGACAAGGCTTTGAAGTTGGCTGATGAAGTTGAGGAG
ATTTTCATCAAACACTTTGCTGAAGATGATAAAAAGAAGGCTATGAAGTACTTAAAGCCA
ACTCAGAAAAAAGAATCTCATGCTGTTACCTTTTTCATCGCTCAAACTAAGGAACTCAAG
TACAGAGATGTGTTCCTTATATGTACTACATCGATGACTGCTGTTATCGGAGTCCTGTTT
CTCCATCTAACGCTTGTAGCAAAAGGGTATTCCTATAATCAAATTCAAGCAATTCCTGCC
CTCCTATTATTGGTCTTTATTTTGCTGCTGGTGTGCCCATTCAACATCATATACAAATCT
AGCCGTTATCGATTCATTCGTGTTATAAGGAACATCATGTTTTCACCTTTGTATAAGGTT
GTCATGTTGGACTTCTTCATGGCTGATCAACTTTGTAGCCAGGTTCCAATGCTAAGAAAC
CTTGAATATGTAGCATGCTATTACATAACTGGAAGTTACAAAACTCAAGATTATGGATAC
TGTATGAGGACAAAATATTATAGAGACCTTGCTTATGCAGTTTCTTTCTTGCCATATTAC
TGGAGAGCTATGCAGTGTGCACGAAGATGGTTCGATGAAGGACACAAAAGCCACCTAGTC
AACTTAGGAAAATATGTGTCTGCAATGTTGGCTGCTGGTGCAAAAGTTGCATATGAAAAA
GAAAAGAATATGGGATGGCTTTGTTTAGTTATAGTCATGTCAAGTGTTGCAACTGTATAC
CAATTATACTGGGATTTTGTTAAAGATTGGGGCTTGCTTCAATGTCATTCCAAGAATCCT
TGGTTAAGGAATGAATTGATGCTACGACGAAAATTTATCTACTACTTCTCCATGGGATTG
AACCTTGTGTTGAGACTAGCATGGTTACAAACAGTACTTCATTACAATTTTGGAACTGTA
GACTACAGGGTAACAGGGCTATTTTTAGCAGCCCTTGAAGTCATTAGAAGAGGACATTGG
AATTATTACAGGTCAAGTACTATTTATGGGAAGAGGAGAGCATCAGAACATTTGTCCCAG
CTTCCAATTATTTCTTGTGTAGTGGAAGATAGTTCTGAAACACAACCAGAATCTGTGAAT
TCATCTGCTTCAAGTGATTCTTCAAAGGAAGCAGTTTTTGACATGAAATTACCAAGAAGA
AGTCTGTTAGCAACATTCACATGTAATGCTTGTGGTGCTCGATCGCAAAGACTCATAAAC
AGATTAGCATATGAAAGAGGGACTGTGTTTATACAGTGTTCAGGCTGCTCTCAGTATCAC
AAATTAGTTGACAACCTTGGACTTGTGGTTGAGTACAACTTCAAGGATGAAATTAGTATG
GATCCAGATGCTGATCAAGATTGA