Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064542
CDS Infomation

pacid=37472612 polypeptide=PGSC0003DMP400043513 locus=PGSC0003DMG400025080 ID=PGSC0003DMT400064542.v4.03 annot-version=v4.03
Sequence

ATGGCTTACCAAAACACCAATGGTTGCATTTCTGATTCAATTGAAATTCTCGATCCAAAA
CCTCTTGCAGTAGTAGCTTCTGGTGTTGTTCATCCTCCTATTGTTGCATCTTTCAATGAT
AGAATTCGTCCACTTCTCGACTGCATAGACAAGCTCCGCCATCTTAACATAATGCAAGAA
GGTATCCAGCTCCCAACGATCGTAGTAGTCGGGGATCAATCTTCTGGAAAGTCCAGTGTT
CTTGAATCCCTTGCTGGGATCAGTCTTCCTAGAGGACAAGGCATTTGCACCAGGGTCCCT
CTTGTTATGAGGCTGCAGAATGATCCAAACATCACTGCACCAAATCTTCAGTTGGAGTAC
AATAACAAGTCACTCCCTGTTGATGAAATTGGCATTGCAGATGCTATCATTCTTGCTACT
GATGAAATTGCTGGACATGGTAAAGGTATATCTAACTACCCTTTAACATTAGTAGTTAAA
AAAAACGGTGTCCCTGATTTGACCATGGTGGATTTACCTGGTATTACTAGAGTTGCTGTA
CAAGGACAACCTGAAGACATTTATGAACAAGTTTATGATATTATTATGAAATACATAGTC
CCTGAAGAAAGCATAATCTTGAATGTTTTATCCGCTACTGTTGATTTCCCTACTTGTGAG
TCTATTAGAATGTCTCAGAAAGTGGACAAAACAGGAGAAAGGACTCTGGCTGTTGTGACA
AAAGCTGATAAAACCACGGAAGGGCTGCTTGAAAAGGTTACTGCTGATGAAGTGAATATA
GGGCTTGGCTATGTTTGTGTGAGGAATAGAATTGGGAATGAGTCTTATGAAGAAGCTAGG
AGTGATGAGCAAAGGCTTTTTTCAACTCATCCACTTCTGTCGAAGATTGATAAATCGATG
GTTAGCGTTCCTATTTTGGCACAAAAGCTGGTGCGTATTCAAGCAAGCATCATTTCAAAA
TGCTTGCCTGAAATTGTGAGGAAGATCAATGATAGACTTGCTGCCAATCTTGCTGAACTC
AACAGGCTTCCTCAACATCTAACTTCTGTAGCTGAAGCTCTGACAGCATTTATGCGCATT
CTCAGTTCATCAAAGGATTCATTGAAGAAAATTCTTTTAAGTGGGGAGTTTGATGAGTAT
CCTGATGATAAAGAAATGCACTCTGCAGCTAGAATTGTTGAAATGCTTAATCAATACTCT
AATGAGCTGCATTCCAAGAATTTTGAGAAAGCGGATGAATTCTTGATGGAAGAGATCATG
GTTTTACAGGAAACAAAAGGGATTGGATTGCCAAACTTCCTTCCTCGAGCTGTTTTCCTT
AATGTTTTGCAGAGAAAAGTGAAGGAAATTGCCGCCTCTCCAGAGGATTTTGTGGGGAAA
CTGTGGAATTACTTAGAGCGAGTTGTTATCATAGTTTTAATGTATCATTGTGAGAACTAT
CCACAGCTTCAGTCTTCTACTAGAAGAGCAGCCCAAAACTTGATTGCCAAGAAAAAGAAT
GAATCAGTTGATTGGGTAAGGGAAATCATCGGGATGGAAAAGCTGACTGATTACACTTGT
AATCCTGACTATTTAACTACTTATAGTAAGTTCATGGCTCAACAACACATGTTCATGGAG
ATTATGAATGATCATGGGAAGTGCTCGGTGATAAACCTTGAAGGGGTAGGAGAAATCGAT
GTTGGTCATTTGAGGAAGCATCTTGATGTGGTGCAGCAGGCTTTTGATTTGAAGATGAGA
ATGATGGCCTACTGGAAAATTGTGCTAATGAGGCTGGTGGATTCTATGGCCTTGCACATA
ATGTTCAGCATTCGAAACATGATTAATAAGGAGATGGAAAACGAGATCATTCAGGATCTG
ATGGCACCACATGGTGGTGGAATTGAAAGAATGCTTGACGAGTCGCCTTTGGTTGCTGAA
AAACGCAATAGGCTCAAAAAGAGTGTCAAGCTTCTCAAGGAGTCCAAAGAGGTGGTGGCC
AATATCATGGACAGGATTTCACTTTATGATGATCATGAAAGTGACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400043513
PEP Infomation

pacid=37472612 transcript=PGSC0003DMT400064542 locus=PGSC0003DMG400025080 ID=PGSC0003DMT400064542.v4.03 annot-version=v4.03
Sequence

MAYQNTNGCISDSIEILDPKPLAVVASGVVHPPIVASFNDRIRPLLDCIDKLRHLNIMQE
GIQLPTIVVVGDQSSGKSSVLESLAGISLPRGQGICTRVPLVMRLQNDPNITAPNLQLEY
NNKSLPVDEIGIADAIILATDEIAGHGKGISNYPLTLVVKKNGVPDLTMVDLPGITRVAV
QGQPEDIYEQVYDIIMKYIVPEESIILNVLSATVDFPTCESIRMSQKVDKTGERTLAVVT
KADKTTEGLLEKVTADEVNIGLGYVCVRNRIGNESYEEARSDEQRLFSTHPLLSKIDKSM
VSVPILAQKLVRIQASIISKCLPEIVRKINDRLAANLAELNRLPQHLTSVAEALTAFMRI
LSSSKDSLKKILLSGEFDEYPDDKEMHSAARIVEMLNQYSNELHSKNFEKADEFLMEEIM
VLQETKGIGLPNFLPRAVFLNVLQRKVKEIAASPEDFVGKLWNYLERVVIIVLMYHCENY
PQLQSSTRRAAQNLIAKKKNESVDWVREIIGMEKLTDYTCNPDYLTTYSKFMAQQHMFME
IMNDHGKCSVINLEGVGEIDVGHLRKHLDVVQQAFDLKMRMMAYWKIVLMRLVDSMALHI
MFSIRNMINKEMENEIIQDLMAPHGGGIERMLDESPLVAEKRNRLKKSVKLLKESKEVVA
NIMDRISLYDDHESD*

Transcript Sequence

Transcript ID

PGSC0003DMT400064542
Transcript Infomation

pacid=37472612 locus=PGSC0003DMG400025080 ID=PGSC0003DMT400064542.v4.03 annot-version=v4.03
Sequence

ATGGCTTACCAAAACACCAATGGTTGCATTTCTGATTCAATTGAAATTCTCGATCCAAAA
CCTCTTGCAGTAGTAGCTTCTGGTGTTGTTCATCCTCCTATTGTTGCATCTTTCAATGAT
AGAATTCGTCCACTTCTCGACTGCATAGACAAGCTCCGCCATCTTAACATAATGCAAGAA
GGTATCCAGCTCCCAACGATCGTAGTAGTCGGGGATCAATCTTCTGGAAAGTCCAGTGTT
CTTGAATCCCTTGCTGGGATCAGTCTTCCTAGAGGACAAGGCATTTGCACCAGGGTCCCT
CTTGTTATGAGGCTGCAGAATGATCCAAACATCACTGCACCAAATCTTCAGTTGGAGTAC
AATAACAAGTCACTCCCTGTTGATGAAATTGGCATTGCAGATGCTATCATTCTTGCTACT
GATGAAATTGCTGGACATGGTAAAGGTATATCTAACTACCCTTTAACATTAGTAGTTAAA
AAAAACGGTGTCCCTGATTTGACCATGGTGGATTTACCTGGTATTACTAGAGTTGCTGTA
CAAGGACAACCTGAAGACATTTATGAACAAGTTTATGATATTATTATGAAATACATAGTC
CCTGAAGAAAGCATAATCTTGAATGTTTTATCCGCTACTGTTGATTTCCCTACTTGTGAG
TCTATTAGAATGTCTCAGAAAGTGGACAAAACAGGAGAAAGGACTCTGGCTGTTGTGACA
AAAGCTGATAAAACCACGGAAGGGCTGCTTGAAAAGGTTACTGCTGATGAAGTGAATATA
GGGCTTGGCTATGTTTGTGTGAGGAATAGAATTGGGAATGAGTCTTATGAAGAAGCTAGG
AGTGATGAGCAAAGGCTTTTTTCAACTCATCCACTTCTGTCGAAGATTGATAAATCGATG
GTTAGCGTTCCTATTTTGGCACAAAAGCTGGTGCGTATTCAAGCAAGCATCATTTCAAAA
TGCTTGCCTGAAATTGTGAGGAAGATCAATGATAGACTTGCTGCCAATCTTGCTGAACTC
AACAGGCTTCCTCAACATCTAACTTCTGTAGCTGAAGCTCTGACAGCATTTATGCGCATT
CTCAGTTCATCAAAGGATTCATTGAAGAAAATTCTTTTAAGTGGGGAGTTTGATGAGTAT
CCTGATGATAAAGAAATGCACTCTGCAGCTAGAATTGTTGAAATGCTTAATCAATACTCT
AATGAGCTGCATTCCAAGAATTTTGAGAAAGCGGATGAATTCTTGATGGAAGAGATCATG
GTTTTACAGGAAACAAAAGGGATTGGATTGCCAAACTTCCTTCCTCGAGCTGTTTTCCTT
AATGTTTTGCAGAGAAAAGTGAAGGAAATTGCCGCCTCTCCAGAGGATTTTGTGGGGAAA
CTGTGGAATTACTTAGAGCGAGTTGTTATCATAGTTTTAATGTATCATTGTGAGAACTAT
CCACAGCTTCAGTCTTCTACTAGAAGAGCAGCCCAAAACTTGATTGCCAAGAAAAAGAAT
GAATCAGTTGATTGGGTAAGGGAAATCATCGGGATGGAAAAGCTGACTGATTACACTTGT
AATCCTGACTATTTAACTACTTATAGTAAGTTCATGGCTCAACAACACATGTTCATGGAG
ATTATGAATGATCATGGGAAGTGCTCGGTGATAAACCTTGAAGGGGTAGGAGAAATCGAT
GTTGGTCATTTGAGGAAGCATCTTGATGTGGTGCAGCAGGCTTTTGATTTGAAGATGAGA
ATGATGGCCTACTGGAAAATTGTGCTAATGAGGCTGGTGGATTCTATGGCCTTGCACATA
ATGTTCAGCATTCGAAACATGATTAATAAGGAGATGGAAAACGAGATCATTCAGGATCTG
ATGGCACCACATGGTGGTGGAATTGAAAGAATGCTTGACGAGTCGCCTTTGGTTGCTGAA
AAACGCAATAGGCTCAAAAAGAGTGTCAAGCTTCTCAAGGAGTCCAAAGAGGTGGTGGCC
AATATCATGGACAGGATTTCACTTTATGATGATCATGAAAGTGACTGA