Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064516
CDS Infomation

pacid=37475198 polypeptide=PGSC0003DMP400043496 locus=PGSC0003DMG400025069 ID=PGSC0003DMT400064516.v4.03 annot-version=v4.03
Sequence

ATGGGGTGTGTTCAAGCAAAGCCTTCAATGCATTCGCCGCCTCGGGGACTAGAGAAGTTG
AAATTAGAGAGTGGATATGTTGGTAGAGGAGAACATGTTAGGCCAAGGAGGTCTACTGGA
CAGAGGCCTCATGAACTAAGGGAGAAAAATGCTGCTGGTAGGAGATTAAGTGATGCAAAC
AGAGATACTATCAATGAAAGGATCAATTTGGTGATCACAAATGAGGGAGAAAAAAAGCAT
ACTAATGAGAACAATGATGTTGATAGGAAAGTTACCAAGACAACAAGAACAACTCATGAG
GAGGAAGAGTTAATAGATGGATGGCCAAAATGGTTAGTTGATAATATTCCAAGAGAAGTT
TTGGCTGGTTTAGTCCCAAAAAGTGCTGATTCTTATGAAAAAATTGACAAGGTAGGTTCA
GGGACTTATAGCAACGTATATAGAGCGCGGGACAGGGATACTGGGATGATTGTTGCCTTA
AAGAAAGTTCGTTTTGATACCTCAGAACCAGAGAGTATAAAGTTCATGGCTCGAGAGATT
ATGATCTTGCAGCAATTGGACCATCCAAATATCATAAAGCTTGAAGGATTGGCTACTTCC
AGAATGCATTATAGTCTTTATATAGTTTTCGAATACATGCAGTCTGATCTTACTAGCATA
ATATCTCGGCCTGATATGAGGCTCAGTGAAGCACAGATTAAGTGTTACATGCAGCAGCTG
CTCTCGGGGTTGCAGCATTGCCACGAGAGGGGTATTTTGCACCGAGATATTAAGGGATCC
AATTTGTTGATTGACAAAAATGGGATGCTAAAAATTGCTGATTTTGGACTTGCAAATCAC
TTTAATCCTGAAAAGAAACGTCCTCTTACAAGTCGAGTTGTCACACTTTGGTACAGAGCT
CCAGAACTACTACTAGGTGCTACAGATTATGGAATAGGTATTGATCTTTGGAGTGCAGGC
TGCCTCATGGCTGAAATGTTTGCAGGCAGGCCCATTCTCCCAGGTCGCACCGAGGTGGAA
CAGCTGCACAAGATATTCAAGCTCTGTGGTACACCTACAGAGGATTACTGGAGGAAAACG
AAACTTTCGACTACCTTCAGGCCACCATATACCTACAGGTCTAACAAGAAGGAAGCTTTC
AGGCACTTCCCTGCATCTTCTTGGAGGCTCTTAAGCGTTCTTCTTGCGCTAAATCCTGCA
AATCGCGGTTCTGCAGGTTCAGCTCTCCAAGATGAGTTCTTTAGTACGAGCCCGTTGGCA
TGTGAACTCTCTGAGCTGCCTGTAGTCTATAAGGAGGATCCTGTGGCAGCATTAAACCTT
GAGAAGAGAAGGCACAAGACTCGACAACGCTCTCAATCACAAAAGGAACGAAAAAAGAAA
GTAATAGACGAAGAGGAAACAAAACCAGACGACGTTTGCTCTAATGAGGAGCCAATAAAG
AGTAGACTTTCAACAGTCTTTAGACTACTAGAGCCAGGAAGTAGCAGTACTACTATTACT
ACTACAACTACTACAAGCACATCTTCAAGTACTTCAAAGCCAACTTTAAAATCTCAGAGT
CCTCAGAGTTCTCCGACAAGTACTGAATCTCATCCTAATTCCACTACAAACATCAAGAAT
AAACCTCCGTTGCCAAATGCTAGAAGAAACCGAACTAATAAGTACAACAACAAGGACGCG
ATGAATAGATTGAGTCGAGCCCAAAGGTCTCAATCAAGCAAAGATTTTTCGAGATCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400043496
PEP Infomation

pacid=37475198 transcript=PGSC0003DMT400064516 locus=PGSC0003DMG400025069 ID=PGSC0003DMT400064516.v4.03 annot-version=v4.03
Sequence

MGCVQAKPSMHSPPRGLEKLKLESGYVGRGEHVRPRRSTGQRPHELREKNAAGRRLSDAN
RDTINERINLVITNEGEKKHTNENNDVDRKVTKTTRTTHEEEELIDGWPKWLVDNIPREV
LAGLVPKSADSYEKIDKVGSGTYSNVYRARDRDTGMIVALKKVRFDTSEPESIKFMAREI
MILQQLDHPNIIKLEGLATSRMHYSLYIVFEYMQSDLTSIISRPDMRLSEAQIKCYMQQL
LSGLQHCHERGILHRDIKGSNLLIDKNGMLKIADFGLANHFNPEKKRPLTSRVVTLWYRA
PELLLGATDYGIGIDLWSAGCLMAEMFAGRPILPGRTEVEQLHKIFKLCGTPTEDYWRKT
KLSTTFRPPYTYRSNKKEAFRHFPASSWRLLSVLLALNPANRGSAGSALQDEFFSTSPLA
CELSELPVVYKEDPVAALNLEKRRHKTRQRSQSQKERKKKVIDEEETKPDDVCSNEEPIK
SRLSTVFRLLEPGSSSTTITTTTTTSTSSSTSKPTLKSQSPQSSPTSTESHPNSTTNIKN
KPPLPNARRNRTNKYNNKDAMNRLSRAQRSQSSKDFSRS*

Transcript Sequence

Transcript ID

PGSC0003DMT400064516
Transcript Infomation

pacid=37475198 locus=PGSC0003DMG400025069 ID=PGSC0003DMT400064516.v4.03 annot-version=v4.03
Sequence

ATGGGGTGTGTTCAAGCAAAGCCTTCAATGCATTCGCCGCCTCGGGGACTAGAGAAGTTG
AAATTAGAGAGTGGATATGTTGGTAGAGGAGAACATGTTAGGCCAAGGAGGTCTACTGGA
CAGAGGCCTCATGAACTAAGGGAGAAAAATGCTGCTGGTAGGAGATTAAGTGATGCAAAC
AGAGATACTATCAATGAAAGGATCAATTTGGTGATCACAAATGAGGGAGAAAAAAAGCAT
ACTAATGAGAACAATGATGTTGATAGGAAAGTTACCAAGACAACAAGAACAACTCATGAG
GAGGAAGAGTTAATAGATGGATGGCCAAAATGGTTAGTTGATAATATTCCAAGAGAAGTT
TTGGCTGGTTTAGTCCCAAAAAGTGCTGATTCTTATGAAAAAATTGACAAGGTAGGTTCA
GGGACTTATAGCAACGTATATAGAGCGCGGGACAGGGATACTGGGATGATTGTTGCCTTA
AAGAAAGTTCGTTTTGATACCTCAGAACCAGAGAGTATAAAGTTCATGGCTCGAGAGATT
ATGATCTTGCAGCAATTGGACCATCCAAATATCATAAAGCTTGAAGGATTGGCTACTTCC
AGAATGCATTATAGTCTTTATATAGTTTTCGAATACATGCAGTCTGATCTTACTAGCATA
ATATCTCGGCCTGATATGAGGCTCAGTGAAGCACAGATTAAGTGTTACATGCAGCAGCTG
CTCTCGGGGTTGCAGCATTGCCACGAGAGGGGTATTTTGCACCGAGATATTAAGGGATCC
AATTTGTTGATTGACAAAAATGGGATGCTAAAAATTGCTGATTTTGGACTTGCAAATCAC
TTTAATCCTGAAAAGAAACGTCCTCTTACAAGTCGAGTTGTCACACTTTGGTACAGAGCT
CCAGAACTACTACTAGGTGCTACAGATTATGGAATAGGTATTGATCTTTGGAGTGCAGGC
TGCCTCATGGCTGAAATGTTTGCAGGCAGGCCCATTCTCCCAGGTCGCACCGAGGTGGAA
CAGCTGCACAAGATATTCAAGCTCTGTGGTACACCTACAGAGGATTACTGGAGGAAAACG
AAACTTTCGACTACCTTCAGGCCACCATATACCTACAGGTCTAACAAGAAGGAAGCTTTC
AGGCACTTCCCTGCATCTTCTTGGAGGCTCTTAAGCGTTCTTCTTGCGCTAAATCCTGCA
AATCGCGGTTCTGCAGGTTCAGCTCTCCAAGATGAGTTCTTTAGTACGAGCCCGTTGGCA
TGTGAACTCTCTGAGCTGCCTGTAGTCTATAAGGAGGATCCTGTGGCAGCATTAAACCTT
GAGAAGAGAAGGCACAAGACTCGACAACGCTCTCAATCACAAAAGGAACGAAAAAAGAAA
GTAATAGACGAAGAGGAAACAAAACCAGACGACGTTTGCTCTAATGAGGAGCCAATAAAG
AGTAGACTTTCAACAGTCTTTAGACTACTAGAGCCAGGAAGTAGCAGTACTACTATTACT
ACTACAACTACTACAAGCACATCTTCAAGTACTTCAAAGCCAACTTTAAAATCTCAGAGT
CCTCAGAGTTCTCCGACAAGTACTGAATCTCATCCTAATTCCACTACAAACATCAAGAAT
AAACCTCCGTTGCCAAATGCTAGAAGAAACCGAACTAATAAGTACAACAACAAGGACGCG
ATGAATAGATTGAGTCGAGCCCAAAGGTCTCAATCAAGCAAAGATTTTTCGAGATCTTGA