Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064485
CDS Infomation

pacid=37473745 polypeptide=PGSC0003DMP400043474 locus=PGSC0003DMG401025057 ID=PGSC0003DMT400064485.v4.03 annot-version=v4.03
Sequence

ATGAACAGATTTCAGGAAGTTATACCTTTAAATGCTGGCAACATATTTGGTGCTGAAGAT
AACCGCCCAATTTCAGTTTGGGAGGACATCATTCGCGAAAGTTTGAATAAAGTCTCACCA
GTGAATAAGTTTAAATCCTTTAGTGATCCTCCTTCTCCATCAAGGTTTAGGCCATCTGAA
GATGCCCCTGATATAGAAGAAGAAATCGCTTTTGAATCTGACAGTGGCAGTGAGGAGGAA
ATTGTCCCAATAAATGAAGAGTGCAGTGACTTTGTTGAAATCAAGGATGGATGTGTGATG
GAGGATCATACTATTGTGAAAAATGATGTAGCTGTTTCGAACCATACTTGGGGTTTGGAG
CCAATCAATGAGGAGTTTCAAAAGCAATTTCCTTCTTCAAAGAAATTAGACAGGCTGAAT
TGCTTTAGACCAGACGAGGAGGAAGAAGAAACAGGAGAATCAAATTTGCAGTTTGCCAAA
AAATTGACAAAAACGCTTAGTGGGACAGAAAGAATTGGTCTTTGCTGGCCAGAGAAACCA
TTGGATCTTCTGGGCCGACATGTTTCAGAAAGACCTGGTTCCTTCAAATCAATGAAATCA
TTCAAAGCTTCTAAATCTTTTAACACTTACAGTTCTTTTAAGTTGACTGTTAATGGTCAG
AATAGAACACAATCAGATGCAAGTCTGCTTGCAGGACTAGACCTTGAAGCTTTGATAAAT
AGGAAAAGGAAACCATCTTATGTGAGGATTGTGAGCAAGCAAATGGTTGGAGTTTTTCTT
AGCGTATGGGTTCGTAGGGGCCTAAGAAAGCATATACAGAATTTGAATGTATCTACAGTT
GGTGTTGGTGTAATGGGCTACATAGGTAACAAGGGATCAGTATCTGTGAGCATGTCAATA
TATCAGACTTTCTTTTGCTTTGTCTGTACTCACCTTACATCGGGTGAGAAGGAGGCAGAT
GCAGTCAAAAGAAACACTGACGTCCATGAAATTCATCGGAGAACACATTTCAATGCATTT
TCTTTAATTGGACTTCCTAAGAGCATCCATGATCATGAGCGAATAATCTGGCTGGGAGAT
CTTAACTATCGTATAAATTTGCCATATGATAGAACACGGGAGCTGATATCAAAAAAGGAC
TGGTGTAAGTTGATTGAATATGATCAGCTCAGCAAAGAGTTCAAGAAAGGTCGTGCATTT
GATGGGTGGTCCGAAGGTACTTTAAACTTTCCGCCAACTTATAAATATGAAGTAAACTCA
GAAAAGTATTGTGGAGAGGATCCAAAGGCCGGGAGACGTAATCCAGCATGGTGTGATCGA
ATCCTATCATTCGGGAAGGGAATAAGGCAGTTGCATTACGGGAGATCTGAACTCAAGTTT
TCAGATCATCGACCTGTCTCTGCCACATATATGGTAGAGGTTGAGGTATTTAGCCCAAGG
AAGTTGCAACGGGCCCTCACTTTTACTGATGCGGAAATTGCGAAGGAGGAAATTGTCACA
AATATGGGATTGGAGAATGGAATGAGCCGATTCATATCAGACCAGGGTGAATCTTACTGG
ATGCGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400043474
PEP Infomation

pacid=37473745 transcript=PGSC0003DMT400064485 locus=PGSC0003DMG401025057 ID=PGSC0003DMT400064485.v4.03 annot-version=v4.03
Sequence

MNRFQEVIPLNAGNIFGAEDNRPISVWEDIIRESLNKVSPVNKFKSFSDPPSPSRFRPSE
DAPDIEEEIAFESDSGSEEEIVPINEECSDFVEIKDGCVMEDHTIVKNDVAVSNHTWGLE
PINEEFQKQFPSSKKLDRLNCFRPDEEEEETGESNLQFAKKLTKTLSGTERIGLCWPEKP
LDLLGRHVSERPGSFKSMKSFKASKSFNTYSSFKLTVNGQNRTQSDASLLAGLDLEALIN
RKRKPSYVRIVSKQMVGVFLSVWVRRGLRKHIQNLNVSTVGVGVMGYIGNKGSVSVSMSI
YQTFFCFVCTHLTSGEKEADAVKRNTDVHEIHRRTHFNAFSLIGLPKSIHDHERIIWLGD
LNYRINLPYDRTRELISKKDWCKLIEYDQLSKEFKKGRAFDGWSEGTLNFPPTYKYEVNS
EKYCGEDPKAGRRNPAWCDRILSFGKGIRQLHYGRSELKFSDHRPVSATYMVEVEVFSPR
KLQRALTFTDAEIAKEEIVTNMGLENGMSRFISDQGESYWMR*

Transcript Sequence

Transcript ID

PGSC0003DMT400064485
Transcript Infomation

pacid=37473745 locus=PGSC0003DMG401025057 ID=PGSC0003DMT400064485.v4.03 annot-version=v4.03
Sequence

ATGAACAGATTTCAGGAAGTTATACCTTTAAATGCTGGCAACATATTTGGTGCTGAAGAT
AACCGCCCAATTTCAGTTTGGGAGGACATCATTCGCGAAAGTTTGAATAAAGTCTCACCA
GTGAATAAGTTTAAATCCTTTAGTGATCCTCCTTCTCCATCAAGGTTTAGGCCATCTGAA
GATGCCCCTGATATAGAAGAAGAAATCGCTTTTGAATCTGACAGTGGCAGTGAGGAGGAA
ATTGTCCCAATAAATGAAGAGTGCAGTGACTTTGTTGAAATCAAGGATGGATGTGTGATG
GAGGATCATACTATTGTGAAAAATGATGTAGCTGTTTCGAACCATACTTGGGGTTTGGAG
CCAATCAATGAGGAGTTTCAAAAGCAATTTCCTTCTTCAAAGAAATTAGACAGGCTGAAT
TGCTTTAGACCAGACGAGGAGGAAGAAGAAACAGGAGAATCAAATTTGCAGTTTGCCAAA
AAATTGACAAAAACGCTTAGTGGGACAGAAAGAATTGGTCTTTGCTGGCCAGAGAAACCA
TTGGATCTTCTGGGCCGACATGTTTCAGAAAGACCTGGTTCCTTCAAATCAATGAAATCA
TTCAAAGCTTCTAAATCTTTTAACACTTACAGTTCTTTTAAGTTGACTGTTAATGGTCAG
AATAGAACACAATCAGATGCAAGTCTGCTTGCAGGACTAGACCTTGAAGCTTTGATAAAT
AGGAAAAGGAAACCATCTTATGTGAGGATTGTGAGCAAGCAAATGGTTGGAGTTTTTCTT
AGCGTATGGGTTCGTAGGGGCCTAAGAAAGCATATACAGAATTTGAATGTATCTACAGTT
GGTGTTGGTGTAATGGGCTACATAGGTAACAAGGGATCAGTATCTGTGAGCATGTCAATA
TATCAGACTTTCTTTTGCTTTGTCTGTACTCACCTTACATCGGGTGAGAAGGAGGCAGAT
GCAGTCAAAAGAAACACTGACGTCCATGAAATTCATCGGAGAACACATTTCAATGCATTT
TCTTTAATTGGACTTCCTAAGAGCATCCATGATCATGAGCGAATAATCTGGCTGGGAGAT
CTTAACTATCGTATAAATTTGCCATATGATAGAACACGGGAGCTGATATCAAAAAAGGAC
TGGTGTAAGTTGATTGAATATGATCAGCTCAGCAAAGAGTTCAAGAAAGGTCGTGCATTT
GATGGGTGGTCCGAAGGTACTTTAAACTTTCCGCCAACTTATAAATATGAAGTAAACTCA
GAAAAGTATTGTGGAGAGGATCCAAAGGCCGGGAGACGTAATCCAGCATGGTGTGATCGA
ATCCTATCATTCGGGAAGGGAATAAGGCAGTTGCATTACGGGAGATCTGAACTCAAGTTT
TCAGATCATCGACCTGTCTCTGCCACATATATGGTAGAGGTTGAGGTATTTAGCCCAAGG
AAGTTGCAACGGGCCCTCACTTTTACTGATGCGGAAATTGCGAAGGAGGAAATTGTCACA
AATATGGGATTGGAGAATGGAATGAGCCGATTCATATCAGACCAGGGTGAATCTTACTGG
ATGCGGTAA