Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064444
CDS Infomation

pacid=37477467 polypeptide=PGSC0003DMP400043452 locus=PGSC0003DMG400025037 ID=PGSC0003DMT400064444.v4.03 annot-version=v4.03
Sequence

ATGGAGACTCATAAACAAGTAGCAACATACGTTTCTGAGAATTCCAAGAAAAGAATGTTT
CCAGGTGGAAGTGCAATTGATGTTGAGGTAGTGGAAATTTCGCGACCTACCAATTGGAGT
TCGAAATCAAAAACTCCTAAGCAAAAGGAGGATATTTTGGTTGGAAATGGTAGCTCGGGT
AATAGTGGACCAGTAGATGGGGTTCAGTCTTCAAATACGAAATGCCTTTCGTCATCAAAA
AAGAAGAAGAATTGCCTTTCAGTATCTAATAGTCCAATTATTATAGACGAGTTTGGTTCT
GATGTACTATTCGGTGCTGATGAGAACATGGACATGTATTATGATGATTTAGTGTATTCC
GACTATGCTGTTTTACAAGCACATTTTGATAGCATGGATATCCCCCCTGGAGTTGAGGCT
CCAATCCCATGGATGCCTGGTCCCATGAAAGAACAAATGGTGTCAACCACTACAAGTACT
TCAGGAAGAGATGTCTCTGGGGTAGTAAGGGACCAGTCCACTTCATTTAGCAGCTCTACT
CTCGTTGGCCAGCCTACACAGTTTGGGTCATCTTGGTCATCCCCAGGACCTGCTTTAGGC
AAGGAGGGACAATTAGTTATTGGAAATTCGAATGAGAAGAGTTCTAAGGGAGCAAGTAAT
TCAAAGATCCTCTCATCTGGGGCAGAAAAAAAGTTTTCCAATATTAGAAAGAAAATCCAT
TCATCCGGTGCTACAGCCTCTTTTGATTGGAATAACCCATATAAATTGTATGAAGAGTCA
TTATCTCATTATGGAAAGAAATTAGGTTCATCCGGTGCTACAACCTCTTATGGTTCGGGC
AACCAATCTACTCCTATTGGGCCTTATTTTCCAAATCCCGTGGGATCTCCAGTGTCTGAT
ATGAAGAATTTATTTCTTAATCAAACCACTCCAATTTCAGCAGGAATTGCTCATGCATCA
GCTGCTATGATGAACTATTCCCCCCTGAGTTTGCATAAAAGGGCAACAACTGCAGGATGT
CCTTCAATTCCTTCAGGACCGGCTTGTAATGGAGAGCAACATAGAAATTTAGCTGAAATT
CTGAAGAAATTCCAAGTTTTCAAAAAATTTGATACTGTTGAGGATCATTCAGACCATTTC
TATTCTCGACAGGCTTCTTCAGGGAACCTGCCTTCTAAGAATTGGGCCAAGAAAATACAG
GAGGAATGGAAGATACTGGAGAACGATCTGCCTGATACAATATTTGTCAGGGTGTACGAA
TCAAGAATGGATCTGTTAAGAGCAGTTATCATGGGTGCTGATGGAACTCCATATCATGAT
GGCCTTTACTTCTTTGATGTTTTCTTTCCAAGCAACTATCCCAGTGTCCCCCCGCTTGTG
CACTACCATTCCTTTGGCCTTCGAATCAATCCTAATTTGTATAACTGTGGAAAAGTCTGC
CTGAGTTTACTTAACACTTGGACTGGCCAAGGGAAGGAGAAATGGATCCCTCGTGCATCT
ACTATGTTACAAGTCTTGGTGTCTATACAGGGGCTAATTTTAAATGCAAAACCCTATTTC
AATGAGCCCGGTTATGCAAACACAGGCGGGACAACCAGAGGAGATGCAAGCTCACTGCAG
TATAATGAGAACACTTACATTTTAAATCTGAAAACGATGGTCTTCTCCATGAGGCGTCCA
CCAAAGTATTTTGAAGATTTTGTATTAGGGCATTTCTTTCGAAGTGCTCAAGATATTCTT
GTGGCATGTAAAGCATACACAGATGGTGCTCAAGTAGGTAGCCTTGTCCGGGGTGGTGTT
CAGGATGTTGATGAGGGCGACAAAAGCTGCTCACCAACTTTCAAGGCTTCTTTGGCCGGA
TTCATCAAGACAGTTATAGATGCATTTAAGGAGATTGGCGTAAAGGATTGCGACAAATTT
CTTTACTTGGCACAGAGAGGGACTGGAGTAGCGCCTGTTGTTCCTGCAAACACCGCGAAT
TATTTCTTCAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400043452
PEP Infomation

pacid=37477467 transcript=PGSC0003DMT400064444 locus=PGSC0003DMG400025037 ID=PGSC0003DMT400064444.v4.03 annot-version=v4.03
Sequence

METHKQVATYVSENSKKRMFPGGSAIDVEVVEISRPTNWSSKSKTPKQKEDILVGNGSSG
NSGPVDGVQSSNTKCLSSSKKKKNCLSVSNSPIIIDEFGSDVLFGADENMDMYYDDLVYS
DYAVLQAHFDSMDIPPGVEAPIPWMPGPMKEQMVSTTTSTSGRDVSGVVRDQSTSFSSST
LVGQPTQFGSSWSSPGPALGKEGQLVIGNSNEKSSKGASNSKILSSGAEKKFSNIRKKIH
SSGATASFDWNNPYKLYEESLSHYGKKLGSSGATTSYGSGNQSTPIGPYFPNPVGSPVSD
MKNLFLNQTTPISAGIAHASAAMMNYSPLSLHKRATTAGCPSIPSGPACNGEQHRNLAEI
LKKFQVFKKFDTVEDHSDHFYSRQASSGNLPSKNWAKKIQEEWKILENDLPDTIFVRVYE
SRMDLLRAVIMGADGTPYHDGLYFFDVFFPSNYPSVPPLVHYHSFGLRINPNLYNCGKVC
LSLLNTWTGQGKEKWIPRASTMLQVLVSIQGLILNAKPYFNEPGYANTGGTTRGDASSLQ
YNENTYILNLKTMVFSMRRPPKYFEDFVLGHFFRSAQDILVACKAYTDGAQVGSLVRGGV
QDVDEGDKSCSPTFKASLAGFIKTVIDAFKEIGVKDCDKFLYLAQRGTGVAPVVPANTAN
YFFS*

Transcript Sequence

Transcript ID

PGSC0003DMT400064444
Transcript Infomation

pacid=37477467 locus=PGSC0003DMG400025037 ID=PGSC0003DMT400064444.v4.03 annot-version=v4.03
Sequence

ATGGAGACTCATAAACAAGTAGCAACATACGTTTCTGAGAATTCCAAGAAAAGAATGTTT
CCAGGTGGAAGTGCAATTGATGTTGAGGTAGTGGAAATTTCGCGACCTACCAATTGGAGT
TCGAAATCAAAAACTCCTAAGCAAAAGGAGGATATTTTGGTTGGAAATGGTAGCTCGGGT
AATAGTGGACCAGTAGATGGGGTTCAGTCTTCAAATACGAAATGCCTTTCGTCATCAAAA
AAGAAGAAGAATTGCCTTTCAGTATCTAATAGTCCAATTATTATAGACGAGTTTGGTTCT
GATGTACTATTCGGTGCTGATGAGAACATGGACATGTATTATGATGATTTAGTGTATTCC
GACTATGCTGTTTTACAAGCACATTTTGATAGCATGGATATCCCCCCTGGAGTTGAGGCT
CCAATCCCATGGATGCCTGGTCCCATGAAAGAACAAATGGTGTCAACCACTACAAGTACT
TCAGGAAGAGATGTCTCTGGGGTAGTAAGGGACCAGTCCACTTCATTTAGCAGCTCTACT
CTCGTTGGCCAGCCTACACAGTTTGGGTCATCTTGGTCATCCCCAGGACCTGCTTTAGGC
AAGGAGGGACAATTAGTTATTGGAAATTCGAATGAGAAGAGTTCTAAGGGAGCAAGTAAT
TCAAAGATCCTCTCATCTGGGGCAGAAAAAAAGTTTTCCAATATTAGAAAGAAAATCCAT
TCATCCGGTGCTACAGCCTCTTTTGATTGGAATAACCCATATAAATTGTATGAAGAGTCA
TTATCTCATTATGGAAAGAAATTAGGTTCATCCGGTGCTACAACCTCTTATGGTTCGGGC
AACCAATCTACTCCTATTGGGCCTTATTTTCCAAATCCCGTGGGATCTCCAGTGTCTGAT
ATGAAGAATTTATTTCTTAATCAAACCACTCCAATTTCAGCAGGAATTGCTCATGCATCA
GCTGCTATGATGAACTATTCCCCCCTGAGTTTGCATAAAAGGGCAACAACTGCAGGATGT
CCTTCAATTCCTTCAGGACCGGCTTGTAATGGAGAGCAACATAGAAATTTAGCTGAAATT
CTGAAGAAATTCCAAGTTTTCAAAAAATTTGATACTGTTGAGGATCATTCAGACCATTTC
TATTCTCGACAGGCTTCTTCAGGGAACCTGCCTTCTAAGAATTGGGCCAAGAAAATACAG
GAGGAATGGAAGATACTGGAGAACGATCTGCCTGATACAATATTTGTCAGGGTGTACGAA
TCAAGAATGGATCTGTTAAGAGCAGTTATCATGGGTGCTGATGGAACTCCATATCATGAT
GGCCTTTACTTCTTTGATGTTTTCTTTCCAAGCAACTATCCCAGTGTCCCCCCGCTTGTG
CACTACCATTCCTTTGGCCTTCGAATCAATCCTAATTTGTATAACTGTGGAAAAGTCTGC
CTGAGTTTACTTAACACTTGGACTGGCCAAGGGAAGGAGAAATGGATCCCTCGTGCATCT
ACTATGTTACAAGTCTTGGTGTCTATACAGGGGCTAATTTTAAATGCAAAACCCTATTTC
AATGAGCCCGGTTATGCAAACACAGGCGGGACAACCAGAGGAGATGCAAGCTCACTGCAG
TATAATGAGAACACTTACATTTTAAATCTGAAAACGATGGTCTTCTCCATGAGGCGTCCA
CCAAAGTATTTTGAAGATTTTGTATTAGGGCATTTCTTTCGAAGTGCTCAAGATATTCTT
GTGGCATGTAAAGCATACACAGATGGTGCTCAAGTAGGTAGCCTTGTCCGGGGTGGTGTT
CAGGATGTTGATGAGGGCGACAAAAGCTGCTCACCAACTTTCAAGGCTTCTTTGGCCGGA
TTCATCAAGACAGTTATAGATGCATTTAAGGAGATTGGCGTAAAGGATTGCGACAAATTT
CTTTACTTGGCACAGAGAGGGACTGGAGTAGCGCCTGTTGTTCCTGCAAACACCGCGAAT
TATTTCTTCAGTTGA