Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064439
CDS Infomation

pacid=37476525 polypeptide=PGSC0003DMP400043449 locus=PGSC0003DMG400025036 ID=PGSC0003DMT400064439.v4.03 annot-version=v4.03
Sequence

ATGGAAGTTGATGGCATTTTGTACGAAACTCTCCGCCCACTCTCCGCCGCCGGCACCACC
ACCACCGCCACCGACGACTTTCCTCCGTCGTTGTCGTCCTCCGACGAACATGAACCCTAC
GTTGTATTCCGGAACCAGATTTCACTATCAACTATCCAGTGTCCCTCACCGGAAACTGCC
GCGCCTGATTACTTTTCACTCGACCTCGATGGAGACGCCGCCGACCTGAATACCAGCTCT
GTTTCGACACCGGTACCAGCTGCTACTCCTTTGCCGGATAAGGAAGTAGAGAGAGGACTT
GAAGGCAATTGGTTTCGTGCTAATTGTCGGTTTAAGAGTCCCATGCTCCAGCTTCACCAA
GAGATAATAGATTTTTGTGAGTTTTTATCACCTACACTGGAGGAGCAAGCATCTCGTAAT
GAAGCAATAGAATGTGTTTTTAATGTTATTAAATATATCTGGCCCAACTGCAAGCCAGAG
GTTTTCGGATCATTCAAGACAGGGCTTTATCTTCCCACTAGTGATGTTGATCTGGTGATT
TTAGGGTCAGAAATTAGAAGTCCTCAAATTGGGTTACAAGCTCTTTCCAGAGCTCTCTCA
CAGAAAGGAGTTGCGAAGAAGATACAGGTGATTTCAAAGGCTCGTGTGCCAATAATAAAA
TTTGTGGAGAAGAAAAGTGGCATTTCATTTGACATAAGCTTTGATGTGGAAAATGGACCC
AAAGCTGCTGAATTTATTAAGGATGCCATGTCTAGCTGGCCCCCTCTGCGACCATTATGC
TTGATTTTGAAAGTGTTCTTGCAACAGAGAGAGTTAAATGAGGTTTATACTGGTGGGATT
GGATCCTATGCATTGCTTGTAATGCTCATAGCAATGTTGCAGAATCATCGAAATGGTCAA
GCTTCTGCGGAGGAGAATTTGGGAATTCTTTTGGTTAATTTCTTTGATATTTATGGACGC
AAACTAAATACATCAGATGTTGGTGTATCTTGTAATGGTGAAGGTACCTTCTTCCTGAAG
AGTAGGAAAGGGTTCTCAATTAAAGGAAAGCAATCTCTTATCTCCATTGAGGATCCACAG
ACACCAGAAAATGACATAGGCAAGAGCTCCTTCAATTATTTTCAGGTCAGATCTGCTTTT
TCAATGGCTTTCACGACATTGACAAATGCAAAAGCCATATTTGCCCTTGGTTCCAACAAG
AGTATTCTTGGCACAATAATTAGACCAGATGAAGTACTAGTGGAAAGGAAAGGAGGATCT
AATGGGGAAGTGACTTTTAATAACTTGCTCCCAGGCGCTGGGGAGGGACTGCAGCAGTAT
GGTGACCAGCAGGAGATCTACTGTAACTGGCAATTAAATGATGACGAAGAAGCACTCCCC
CGAGGAAATGGGATTGCAGAGGACGGTGATGCTCAATCCTCAGGAAAGAAGAGGAAGTCG
TCAAAGGATAAACAGCCTGCTAAGAAGGTGAAGGAAAACGGGCATAGCAGTAGTGTCAGA
GATGAAGAAAATTCATCGAGGAAAGAGAAGAGTTCGAAGAAGCATTGGAAACATAATAGA
TGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400043449
PEP Infomation

pacid=37476525 transcript=PGSC0003DMT400064439 locus=PGSC0003DMG400025036 ID=PGSC0003DMT400064439.v4.03 annot-version=v4.03
Sequence

MEVDGILYETLRPLSAAGTTTTATDDFPPSLSSSDEHEPYVVFRNQISLSTIQCPSPETA
APDYFSLDLDGDAADLNTSSVSTPVPAATPLPDKEVERGLEGNWFRANCRFKSPMLQLHQ
EIIDFCEFLSPTLEEQASRNEAIECVFNVIKYIWPNCKPEVFGSFKTGLYLPTSDVDLVI
LGSEIRSPQIGLQALSRALSQKGVAKKIQVISKARVPIIKFVEKKSGISFDISFDVENGP
KAAEFIKDAMSSWPPLRPLCLILKVFLQQRELNEVYTGGIGSYALLVMLIAMLQNHRNGQ
ASAEENLGILLVNFFDIYGRKLNTSDVGVSCNGEGTFFLKSRKGFSIKGKQSLISIEDPQ
TPENDIGKSSFNYFQVRSAFSMAFTTLTNAKAIFALGSNKSILGTIIRPDEVLVERKGGS
NGEVTFNNLLPGAGEGLQQYGDQQEIYCNWQLNDDEEALPRGNGIAEDGDAQSSGKKRKS
SKDKQPAKKVKENGHSSSVRDEENSSRKEKSSKKHWKHNRW*

Transcript Sequence

Transcript ID

PGSC0003DMT400064439
Transcript Infomation

pacid=37476525 locus=PGSC0003DMG400025036 ID=PGSC0003DMT400064439.v4.03 annot-version=v4.03
Sequence

ATGGAAGTTGATGGCATTTTGTACGAAACTCTCCGCCCACTCTCCGCCGCCGGCACCACC
ACCACCGCCACCGACGACTTTCCTCCGTCGTTGTCGTCCTCCGACGAACATGAACCCTAC
GTTGTATTCCGGAACCAGATTTCACTATCAACTATCCAGTGTCCCTCACCGGAAACTGCC
GCGCCTGATTACTTTTCACTCGACCTCGATGGAGACGCCGCCGACCTGAATACCAGCTCT
GTTTCGACACCGGTACCAGCTGCTACTCCTTTGCCGGATAAGGAAGTAGAGAGAGGACTT
GAAGGCAATTGGTTTCGTGCTAATTGTCGGTTTAAGAGTCCCATGCTCCAGCTTCACCAA
GAGATAATAGATTTTTGTGAGTTTTTATCACCTACACTGGAGGAGCAAGCATCTCGTAAT
GAAGCAATAGAATGTGTTTTTAATGTTATTAAATATATCTGGCCCAACTGCAAGCCAGAG
GTTTTCGGATCATTCAAGACAGGGCTTTATCTTCCCACTAGTGATGTTGATCTGGTGATT
TTAGGGTCAGAAATTAGAAGTCCTCAAATTGGGTTACAAGCTCTTTCCAGAGCTCTCTCA
CAGAAAGGAGTTGCGAAGAAGATACAGGTGATTTCAAAGGCTCGTGTGCCAATAATAAAA
TTTGTGGAGAAGAAAAGTGGCATTTCATTTGACATAAGCTTTGATGTGGAAAATGGACCC
AAAGCTGCTGAATTTATTAAGGATGCCATGTCTAGCTGGCCCCCTCTGCGACCATTATGC
TTGATTTTGAAAGTGTTCTTGCAACAGAGAGAGTTAAATGAGGTTTATACTGGTGGGATT
GGATCCTATGCATTGCTTGTAATGCTCATAGCAATGTTGCAGAATCATCGAAATGGTCAA
GCTTCTGCGGAGGAGAATTTGGGAATTCTTTTGGTTAATTTCTTTGATATTTATGGACGC
AAACTAAATACATCAGATGTTGGTGTATCTTGTAATGGTGAAGGTACCTTCTTCCTGAAG
AGTAGGAAAGGGTTCTCAATTAAAGGAAAGCAATCTCTTATCTCCATTGAGGATCCACAG
ACACCAGAAAATGACATAGGCAAGAGCTCCTTCAATTATTTTCAGGTCAGATCTGCTTTT
TCAATGGCTTTCACGACATTGACAAATGCAAAAGCCATATTTGCCCTTGGTTCCAACAAG
AGTATTCTTGGCACAATAATTAGACCAGATGAAGTACTAGTGGAAAGGAAAGGAGGATCT
AATGGGGAAGTGACTTTTAATAACTTGCTCCCAGGCGCTGGGGAGGGACTGCAGCAGTAT
GGTGACCAGCAGGAGATCTACTGTAACTGGCAATTAAATGATGACGAAGAAGCACTCCCC
CGAGGAAATGGGATTGCAGAGGACGGTGATGCTCAATCCTCAGGAAAGAAGAGGAAGTCG
TCAAAGGATAAACAGCCTGCTAAGAAGGTGAAGGAAAACGGGCATAGCAGTAGTGTCAGA
GATGAAGAAAATTCATCGAGGAAAGAGAAGAGTTCGAAGAAGCATTGGAAACATAATAGA
TGGTGA