Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064413
CDS Infomation

pacid=37478228 polypeptide=PGSC0003DMP400043432 locus=PGSC0003DMG400025027 ID=PGSC0003DMT400064413.v4.03 annot-version=v4.03
Sequence

ATGACTAGTCATCATGACCATACATATGGTATTAGTACTGACGATGAAGATGAAGATGAT
GAGGAAGAAGAAGAAGAAGACGAAAACGAGTACTCCCATAATGAGTGCAACAAAATCCAT
GAACCATATAATGGTGGTGGTCGTGATAACAGAAATAATAAAGTTGGATTAAACATGATA
TTCTCAAGAAGTAAATTGATAGACCCTAAAGCACAATGGGTTAAAGAATGGAATAGAGTT
TTCTTGTTAGTATGTGCAATTGGTCTTTTTGTTGATCCACTTTTTTTCTATACAATTTCT
ATAAGTGAAAATTGTATGTGTCTTTTCGTCGATGGGTGGTTTTCCGTCACCGTGACGGTT
TTACGATGTATCAACGATGGTTTACATGTATGCAATATGTGGTTGCAATTCAAGATGGTG
ATAAATAGAAGAACAAATAATATACCATACTTGAAGGCTAACAAAGGTTTCTTATTTGAT
CTCTTTGTTATACTACCTTTACCTCAGCTAGTTATGTGGGTAGGGATCCCAATTCTATTG
GAAAAAGGATTAACAACAACAGTGATGACAGTTTTATTAATTATATTTTTATTTCAATAT
CTTCCCAAAATCTATCACTCAATTTGCCTCTTGAGAAGAATGCAGAATCTGTCTGGCTAC
ATTTTTGGCACTGTTTGGTGGGGAATTGCACTTAACATCATTGCTTATTTTGTCGCATCA
CACGCTGTGGGAGCATGTTGGTACTTGCTAGGTATTCAAAGGGCAGCCAAATGTCTTAAA
GAACAATGCATAGTTACAAAAGGTTGTACCCTAAAAATGTTGGCATGTGAAGAGTCAATA
TATTATGGAACAAGTAATTTGGTGAAGGAAAAAAATAGATTAATGTGGGGAGAGACAATT
AATGCAAGATTAACTTGTCTTAAAAATGGACAAAATTTTGATTATGGAGCTTATAAATGG
ACTGTTCAACTTGTCTCTAATGAAAATCGTATTGAGAAAATATTACTTCCAATATTTTGG
GGCCTCATGACTCTAAGCACATTTGGGAACTTGGAGAGCACAACAGATTGGCTAGAAGTG
ATTTTCATAATCATAGTTCTCACCTCTGGACTAATTTTAGTCACCATGTTCATTGGCAAC
ATCAAGGTGTTTTTGCATGCAACAACATCAAAGAAACAAGCGATGCAACTAAAGATGAGA
AGTATAGAATGGTGGATGAGAAGAAGAAGGTTACCTAGAGAGTTAAAGCAAAGAACTAGA
AATTTTCAAAGGCAAAAATGGGCTGCAATGCGTGGTGTTGATGAATGTGACATGATTAGA
AATCTTCCTGAGGGTCTTAGGAGGGACATCAAGTACCATTTGTGCTTGGACTTGGTTAGA
CAGGTCCCTTTGTTTCAACATATGGATAGTTTGGTTCTAGAGAACATATGTGATCGTGTG
AAGTCCCTGATTTTCACTAAGGGGGAAACAGTATCTAGAGAGGGAGATCCAGTACAAAGA
ATGTTATTTATAGTAAGAGGTCACCTTCAAAGTAGCCAATATTTACGAGATGGTGTCAAA
AGTTATTGCATGTTAGGCCCTGGAAATTTTAGTGGAGATGAACTATTGTCTTGGTGTCTC
CGGCGACCTTTCGTCGAGCGGTTGCCACCATCGTCCTCCACGTTGGTGACCCTCGAGACC
ACCGAGGCCTTCGGCCTCGAGGCCGAAGACGTCAAGTATGTGACACAACATTTCAGATAT
ACATTTGTGAATGAAAAAGTGAAAAGAAGTGCAAGGTATTATTCACCAGGGTGGAGAACT
TGGGGTGCTGTTGCTATTCAATTAGCTTGGAGAAGATATAAACATCGTTTGACACTTTCT
TCTTTGTCTTTTATTAGACCAAGAAGGCCATTGTCTCGTTGTTCTTCACTCGGGGAGGAT
CGGCTAAGACTATATACTGCTTTGTTGACTTCACCAAAACCTAATTTAGATGATTTTGAT
TTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400043432
PEP Infomation

pacid=37478228 transcript=PGSC0003DMT400064413 locus=PGSC0003DMG400025027 ID=PGSC0003DMT400064413.v4.03 annot-version=v4.03
Sequence

MTSHHDHTYGISTDDEDEDDEEEEEEDENEYSHNECNKIHEPYNGGGRDNRNNKVGLNMI
FSRSKLIDPKAQWVKEWNRVFLLVCAIGLFVDPLFFYTISISENCMCLFVDGWFSVTVTV
LRCINDGLHVCNMWLQFKMVINRRTNNIPYLKANKGFLFDLFVILPLPQLVMWVGIPILL
EKGLTTTVMTVLLIIFLFQYLPKIYHSICLLRRMQNLSGYIFGTVWWGIALNIIAYFVAS
HAVGACWYLLGIQRAAKCLKEQCIVTKGCTLKMLACEESIYYGTSNLVKEKNRLMWGETI
NARLTCLKNGQNFDYGAYKWTVQLVSNENRIEKILLPIFWGLMTLSTFGNLESTTDWLEV
IFIIIVLTSGLILVTMFIGNIKVFLHATTSKKQAMQLKMRSIEWWMRRRRLPRELKQRTR
NFQRQKWAAMRGVDECDMIRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDSLVLENICDRV
KSLIFTKGETVSREGDPVQRMLFIVRGHLQSSQYLRDGVKSYCMLGPGNFSGDELLSWCL
RRPFVERLPPSSSTLVTLETTEAFGLEAEDVKYVTQHFRYTFVNEKVKRSARYYSPGWRT
WGAVAIQLAWRRYKHRLTLSSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPNLDDFD
F*

Transcript Sequence

Transcript ID

PGSC0003DMT400064413
Transcript Infomation

pacid=37478228 locus=PGSC0003DMG400025027 ID=PGSC0003DMT400064413.v4.03 annot-version=v4.03
Sequence

ATGACTAGTCATCATGACCATACATATGGTATTAGTACTGACGATGAAGATGAAGATGAT
GAGGAAGAAGAAGAAGAAGACGAAAACGAGTACTCCCATAATGAGTGCAACAAAATCCAT
GAACCATATAATGGTGGTGGTCGTGATAACAGAAATAATAAAGTTGGATTAAACATGATA
TTCTCAAGAAGTAAATTGATAGACCCTAAAGCACAATGGGTTAAAGAATGGAATAGAGTT
TTCTTGTTAGTATGTGCAATTGGTCTTTTTGTTGATCCACTTTTTTTCTATACAATTTCT
ATAAGTGAAAATTGTATGTGTCTTTTCGTCGATGGGTGGTTTTCCGTCACCGTGACGGTT
TTACGATGTATCAACGATGGTTTACATGTATGCAATATGTGGTTGCAATTCAAGATGGTG
ATAAATAGAAGAACAAATAATATACCATACTTGAAGGCTAACAAAGGTTTCTTATTTGAT
CTCTTTGTTATACTACCTTTACCTCAGCTAGTTATGTGGGTAGGGATCCCAATTCTATTG
GAAAAAGGATTAACAACAACAGTGATGACAGTTTTATTAATTATATTTTTATTTCAATAT
CTTCCCAAAATCTATCACTCAATTTGCCTCTTGAGAAGAATGCAGAATCTGTCTGGCTAC
ATTTTTGGCACTGTTTGGTGGGGAATTGCACTTAACATCATTGCTTATTTTGTCGCATCA
CACGCTGTGGGAGCATGTTGGTACTTGCTAGGTATTCAAAGGGCAGCCAAATGTCTTAAA
GAACAATGCATAGTTACAAAAGGTTGTACCCTAAAAATGTTGGCATGTGAAGAGTCAATA
TATTATGGAACAAGTAATTTGGTGAAGGAAAAAAATAGATTAATGTGGGGAGAGACAATT
AATGCAAGATTAACTTGTCTTAAAAATGGACAAAATTTTGATTATGGAGCTTATAAATGG
ACTGTTCAACTTGTCTCTAATGAAAATCGTATTGAGAAAATATTACTTCCAATATTTTGG
GGCCTCATGACTCTAAGCACATTTGGGAACTTGGAGAGCACAACAGATTGGCTAGAAGTG
ATTTTCATAATCATAGTTCTCACCTCTGGACTAATTTTAGTCACCATGTTCATTGGCAAC
ATCAAGGTGTTTTTGCATGCAACAACATCAAAGAAACAAGCGATGCAACTAAAGATGAGA
AGTATAGAATGGTGGATGAGAAGAAGAAGGTTACCTAGAGAGTTAAAGCAAAGAACTAGA
AATTTTCAAAGGCAAAAATGGGCTGCAATGCGTGGTGTTGATGAATGTGACATGATTAGA
AATCTTCCTGAGGGTCTTAGGAGGGACATCAAGTACCATTTGTGCTTGGACTTGGTTAGA
CAGGTCCCTTTGTTTCAACATATGGATAGTTTGGTTCTAGAGAACATATGTGATCGTGTG
AAGTCCCTGATTTTCACTAAGGGGGAAACAGTATCTAGAGAGGGAGATCCAGTACAAAGA
ATGTTATTTATAGTAAGAGGTCACCTTCAAAGTAGCCAATATTTACGAGATGGTGTCAAA
AGTTATTGCATGTTAGGCCCTGGAAATTTTAGTGGAGATGAACTATTGTCTTGGTGTCTC
CGGCGACCTTTCGTCGAGCGGTTGCCACCATCGTCCTCCACGTTGGTGACCCTCGAGACC
ACCGAGGCCTTCGGCCTCGAGGCCGAAGACGTCAAGTATGTGACACAACATTTCAGATAT
ACATTTGTGAATGAAAAAGTGAAAAGAAGTGCAAGGTATTATTCACCAGGGTGGAGAACT
TGGGGTGCTGTTGCTATTCAATTAGCTTGGAGAAGATATAAACATCGTTTGACACTTTCT
TCTTTGTCTTTTATTAGACCAAGAAGGCCATTGTCTCGTTGTTCTTCACTCGGGGAGGAT
CGGCTAAGACTATATACTGCTTTGTTGACTTCACCAAAACCTAATTTAGATGATTTTGAT
TTCTAA