Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064411
CDS Infomation

pacid=37478630 polypeptide=PGSC0003DMP400043430 locus=PGSC0003DMG400025026 ID=PGSC0003DMT400064411.v4.03 annot-version=v4.03
Sequence

ATGTTCCTTGAGAAATTCTTAGTGTGGAAAGTATTCCCTAGTAATTGCTTGAGATGGATT
CTTCACTTTGCTGTTTTTCAGTGTTCCCCTGAAAATTCCTCATCAGTAAAAGCCTGTAAC
CTCCGTACTCTCTCAGAGACTCTTCAGCGTCTTGTGACGACTTGGTCCAAACGGGATTTT
GTGCAATCAATTTCAATTGAGCAGCAAGCCTATATAACTGCTGCCTTAGGCCTTTGCTTA
GAGAAGATGTCTAAAGAAGATTTAGATGCAACCAAGGATGCAATGCACTGTATTCTTGAA
GGAGTGAGCTGTAGGTTGGAAAGTGCTGACCATTTGATTCGAAAAATGGCAAGCAGTGTT
GCATTAGCGTTTTCCAAAGTAATTGACCCCCTAAATCCTCTCTATCTTGACGATAGTTGC
CGTGAGGAAGCTATTGACTGGGACTTCGGTTTATTAACCCCAGAAAAAAGATTGTTGGCT
AGTCCCACAGACAGAGATGGAAATAAGGGTTGTTCAACCACAGTAGCTGGAAAGGTATTA
AACACTATAGCTGCTGCCAGCACACATGATAACGTGACGACTAAAACGAAGAAATTATTT
GGATTTGAAGCTGTTGATCCAGATGAGATCATTGATCCAGCATCCCTAAATAATGAGGTT
GACTCTAGTAACGATGATGACGATGATGGTGATAATGCAAGTGAAACTTCCGAGTACTCG
AATGACTCGTCTTTGCAGCCATATGACTTGTCAGATGATGGTGCAGATCTAAAAAGAAAT
TTCTCACAGTTAGTGGATGTGATTGGAGCACTAAGGAAATCTGATGATGCTGATGGTGTT
GATCAGGCTATTGATGTTGCTGAGAAGCTTGTACGAGCTTCACCTGATGAGCTCAAGTTT
GTAGCTTCTGATCTAACCAGAAGTCTAATACAACTTCGCTGCTCTGATTCAACTATTGAA
GGGGAGGAAGAGTCTGCTGAAGAGAAGAGACAAAAAGCGATCGTTGCTTTGATTGTCACA
TGTCCTCATGAATCTCTCAGTACACTAAATAAATTACTGTATTCACCAAGTTTAGATGTC
GGCCAGAGGTTAATGATACTTGATGTAATGACGGAGGCTGCACAGGAGCTTGCAAACACA
AGGATTTCAAGACTTAAACAACGGTCGAACGCTCTTGTATCATCCATGGGTGATGAAGCA
TGGTTCATGCCAAAACCTATTGGTCCTCCAGGAGCCGGCCCTTGGAAGGAAATCTCAACA
CCAGGGACTCCTTTTAACTGGTCTCATGGTTATGAGAGAGAACTTCCCTCTAAATCAGGT
CAGATCAAGAGAGGAAAGACACGTCGTTGGAGCCTTCATTCAGCTTTACCAGTAAGCCAG
CTTGAATGGTCCCAGAATAAGTTTCCCCAGTATGCAGCGGCTTTTATGCTTCCAGCCATG
GAAGGATTTGATAAGAAAAGGCATGGTGTAGATTTGCTTGGCAGAGACTTCATTGTTTTG
GGGAAGTTTATCTACATGCTTGGTGTTTGTATGAAGTGTTCAGCCATGCATCCAGAGGCA
TCTATTTTGGCATCTCCTCTTTTGGAATTGTTAAGATCAAGGGAGATATCTCATCATGTG
GAGGCTTATGTTAGGAGATCTGTCCTGTTTACTGCTTCATGCGTACTGATTTCTCTTCAT
CCCTCCTCCGTGGCAGCTGCCTTGGTTGAGGGAAATTCTGAAATTTCAAAAGGACTTGAG
TGGATTCGCAACTGGGCGCTTCATATTGCTGAATCTGACACCGATAGGGAATGCTACACG
CTGGCTATGACTTGCCTCCAACTCCATGCTGAGATGGCTCTACAGACTTCTCGAGTACTT
GAATCACCTGAAAGCTTACACGGATCGAATAAGAGCAGTCTACCATCAAATATAGTGAGG
GGGGCTATCAAAATACCCAATTTAAATGGTGGCATTCTTAGTGCCCCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400043430
PEP Infomation

pacid=37478630 transcript=PGSC0003DMT400064411 locus=PGSC0003DMG400025026 ID=PGSC0003DMT400064411.v4.03 annot-version=v4.03
Sequence

MFLEKFLVWKVFPSNCLRWILHFAVFQCSPENSSSVKACNLRTLSETLQRLVTTWSKRDF
VQSISIEQQAYITAALGLCLEKMSKEDLDATKDAMHCILEGVSCRLESADHLIRKMASSV
ALAFSKVIDPLNPLYLDDSCREEAIDWDFGLLTPEKRLLASPTDRDGNKGCSTTVAGKVL
NTIAAASTHDNVTTKTKKLFGFEAVDPDEIIDPASLNNEVDSSNDDDDDGDNASETSEYS
NDSSLQPYDLSDDGADLKRNFSQLVDVIGALRKSDDADGVDQAIDVAEKLVRASPDELKF
VASDLTRSLIQLRCSDSTIEGEEESAEEKRQKAIVALIVTCPHESLSTLNKLLYSPSLDV
GQRLMILDVMTEAAQELANTRISRLKQRSNALVSSMGDEAWFMPKPIGPPGAGPWKEIST
PGTPFNWSHGYERELPSKSGQIKRGKTRRWSLHSALPVSQLEWSQNKFPQYAAAFMLPAM
EGFDKKRHGVDLLGRDFIVLGKFIYMLGVCMKCSAMHPEASILASPLLELLRSREISHHV
EAYVRRSVLFTASCVLISLHPSSVAAALVEGNSEISKGLEWIRNWALHIAESDTDRECYT
LAMTCLQLHAEMALQTSRVLESPESLHGSNKSSLPSNIVRGAIKIPNLNGGILSAP*

Transcript Sequence

Transcript ID

PGSC0003DMT400064411
Transcript Infomation

pacid=37478630 locus=PGSC0003DMG400025026 ID=PGSC0003DMT400064411.v4.03 annot-version=v4.03
Sequence

ATGTTCCTTGAGAAATTCTTAGTGTGGAAAGTATTCCCTAGTAATTGCTTGAGATGGATT
CTTCACTTTGCTGTTTTTCAGTGTTCCCCTGAAAATTCCTCATCAGTAAAAGCCTGTAAC
CTCCGTACTCTCTCAGAGACTCTTCAGCGTCTTGTGACGACTTGGTCCAAACGGGATTTT
GTGCAATCAATTTCAATTGAGCAGCAAGCCTATATAACTGCTGCCTTAGGCCTTTGCTTA
GAGAAGATGTCTAAAGAAGATTTAGATGCAACCAAGGATGCAATGCACTGTATTCTTGAA
GGAGTGAGCTGTAGGTTGGAAAGTGCTGACCATTTGATTCGAAAAATGGCAAGCAGTGTT
GCATTAGCGTTTTCCAAAGTAATTGACCCCCTAAATCCTCTCTATCTTGACGATAGTTGC
CGTGAGGAAGCTATTGACTGGGACTTCGGTTTATTAACCCCAGAAAAAAGATTGTTGGCT
AGTCCCACAGACAGAGATGGAAATAAGGGTTGTTCAACCACAGTAGCTGGAAAGGTATTA
AACACTATAGCTGCTGCCAGCACACATGATAACGTGACGACTAAAACGAAGAAATTATTT
GGATTTGAAGCTGTTGATCCAGATGAGATCATTGATCCAGCATCCCTAAATAATGAGGTT
GACTCTAGTAACGATGATGACGATGATGGTGATAATGCAAGTGAAACTTCCGAGTACTCG
AATGACTCGTCTTTGCAGCCATATGACTTGTCAGATGATGGTGCAGATCTAAAAAGAAAT
TTCTCACAGTTAGTGGATGTGATTGGAGCACTAAGGAAATCTGATGATGCTGATGGTGTT
GATCAGGCTATTGATGTTGCTGAGAAGCTTGTACGAGCTTCACCTGATGAGCTCAAGTTT
GTAGCTTCTGATCTAACCAGAAGTCTAATACAACTTCGCTGCTCTGATTCAACTATTGAA
GGGGAGGAAGAGTCTGCTGAAGAGAAGAGACAAAAAGCGATCGTTGCTTTGATTGTCACA
TGTCCTCATGAATCTCTCAGTACACTAAATAAATTACTGTATTCACCAAGTTTAGATGTC
GGCCAGAGGTTAATGATACTTGATGTAATGACGGAGGCTGCACAGGAGCTTGCAAACACA
AGGATTTCAAGACTTAAACAACGGTCGAACGCTCTTGTATCATCCATGGGTGATGAAGCA
TGGTTCATGCCAAAACCTATTGGTCCTCCAGGAGCCGGCCCTTGGAAGGAAATCTCAACA
CCAGGGACTCCTTTTAACTGGTCTCATGGTTATGAGAGAGAACTTCCCTCTAAATCAGGT
CAGATCAAGAGAGGAAAGACACGTCGTTGGAGCCTTCATTCAGCTTTACCAGTAAGCCAG
CTTGAATGGTCCCAGAATAAGTTTCCCCAGTATGCAGCGGCTTTTATGCTTCCAGCCATG
GAAGGATTTGATAAGAAAAGGCATGGTGTAGATTTGCTTGGCAGAGACTTCATTGTTTTG
GGGAAGTTTATCTACATGCTTGGTGTTTGTATGAAGTGTTCAGCCATGCATCCAGAGGCA
TCTATTTTGGCATCTCCTCTTTTGGAATTGTTAAGATCAAGGGAGATATCTCATCATGTG
GAGGCTTATGTTAGGAGATCTGTCCTGTTTACTGCTTCATGCGTACTGATTTCTCTTCAT
CCCTCCTCCGTGGCAGCTGCCTTGGTTGAGGGAAATTCTGAAATTTCAAAAGGACTTGAG
TGGATTCGCAACTGGGCGCTTCATATTGCTGAATCTGACACCGATAGGGAATGCTACACG
CTGGCTATGACTTGCCTCCAACTCCATGCTGAGATGGCTCTACAGACTTCTCGAGTACTT
GAATCACCTGAAAGCTTACACGGATCGAATAAGAGCAGTCTACCATCAAATATAGTGAGG
GGGGCTATCAAAATACCCAATTTAAATGGTGGCATTCTTAGTGCCCCTTAG