Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064399
CDS Infomation

pacid=37477227 polypeptide=PGSC0003DMP400043421 locus=PGSC0003DMG400025020 ID=PGSC0003DMT400064399.v4.03 annot-version=v4.03
Sequence

ATGGCCGAAGAATTTCAACTAGGGGGAGGGAATTGGTGGGAAAATAATACGTCCACGTCA
TCAAGGAATAGGTTCGATAGTAGTGGTTCATCCATTACACCTACAACTTCCACATCGGCC
ACTACTATTAACTATAGTAGTAATTGGCCGATAGAAACTGATCATGTGGACATCAAACCT
AGGGCTTTCTTGGATTCTGTGTCGGTGTCTCAATCTTCTGCTCATGATGATAGGGGTGGA
GGAGGAGGAGGTGGCGGCGGCGTTTTATCTTCTCAAGATTCAAATTTCCAAATTATGGGT
TTAGGCCTTACTTCTCAACCACATGATTGGAACCACCAATCTTTATTGAATTATGAGGAT
TCTTCATCACAAATGAATATTAGGGGTTTTTCATTAGATCAAAATAATTCAATATTTAGT
CATTCATCAAATTACGAAGTGGTTGATAATCATCAAGTGTTGCATTCGTCTACGACGAAT
TCTTGGTCTAAATTTCCTCAATTTCTCCGAACATCGCCTTCGTCGGAACAACCTCCACTT
CCACCACCGGCACCGCCGTTGCCGCCACCTCACAGCCAGCTACATTTCTCAAATAATACT
CCATTTTGGAATGCAAGTGCAGCTTCCATGACTGATGTTCCATCAAGTTTATTTCCTTCT
AATTTGAATAATATTCCACAACTTCCCAATAACACAACAATTGATGAGAAAGCAAAGAAT
ATGGGAGAGGTTAGAGATATAAATAAAATTATATCAAAGAAAACCACCGGTACTGAAACA
TCAAATAAAAGACCAAGGAATGAAACTGCAACTCCTTCCCCAGCTTTTAAGGTGAGAAAA
GAGAAAATGGGAGACAGAATCACTACACTACAACAATTAGTCTCACCTTTTGGAAAGACA
GATACAGCTTCTGTATTATCAGAAGCAATTGAGTATATAAAGTTCCTCCATGATCAAATT
GGTGTATTAAGCGCCCCATATATGGAAAGTGGAGCATCCATGCAACATCTTCAGAGTGAT
ATTAAATCCGAAGATGTTAGAGAAGGAAGAAATAAAGATTTGAGAAGTCGAGGATTATGT
TTGGTACCAATTTCAAGTACTTTTCCAGTAACTCATGAGACCAATGTTGATTTATGGACA
CCTACTTTTGGATCAACTTTTAGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400043421
PEP Infomation

pacid=37477227 transcript=PGSC0003DMT400064399 locus=PGSC0003DMG400025020 ID=PGSC0003DMT400064399.v4.03 annot-version=v4.03
Sequence

MAEEFQLGGGNWWENNTSTSSRNRFDSSGSSITPTTSTSATTINYSSNWPIETDHVDIKP
RAFLDSVSVSQSSAHDDRGGGGGGGGGVLSSQDSNFQIMGLGLTSQPHDWNHQSLLNYED
SSSQMNIRGFSLDQNNSIFSHSSNYEVVDNHQVLHSSTTNSWSKFPQFLRTSPSSEQPPL
PPPAPPLPPPHSQLHFSNNTPFWNASAASMTDVPSSLFPSNLNNIPQLPNNTTIDEKAKN
MGEVRDINKIISKKTTGTETSNKRPRNETATPSPAFKVRKEKMGDRITTLQQLVSPFGKT
DTASVLSEAIEYIKFLHDQIGVLSAPYMESGASMQHLQSDIKSEDVREGRNKDLRSRGLC
LVPISSTFPVTHETNVDLWTPTFGSTFR*

Transcript Sequence

Transcript ID

PGSC0003DMT400064399
Transcript Infomation

pacid=37477227 locus=PGSC0003DMG400025020 ID=PGSC0003DMT400064399.v4.03 annot-version=v4.03
Sequence

ATGGCCGAAGAATTTCAACTAGGGGGAGGGAATTGGTGGGAAAATAATACGTCCACGTCA
TCAAGGAATAGGTTCGATAGTAGTGGTTCATCCATTACACCTACAACTTCCACATCGGCC
ACTACTATTAACTATAGTAGTAATTGGCCGATAGAAACTGATCATGTGGACATCAAACCT
AGGGCTTTCTTGGATTCTGTGTCGGTGTCTCAATCTTCTGCTCATGATGATAGGGGTGGA
GGAGGAGGAGGTGGCGGCGGCGTTTTATCTTCTCAAGATTCAAATTTCCAAATTATGGGT
TTAGGCCTTACTTCTCAACCACATGATTGGAACCACCAATCTTTATTGAATTATGAGGAT
TCTTCATCACAAATGAATATTAGGGGTTTTTCATTAGATCAAAATAATTCAATATTTAGT
CATTCATCAAATTACGAAGTGGTTGATAATCATCAAGTGTTGCATTCGTCTACGACGAAT
TCTTGGTCTAAATTTCCTCAATTTCTCCGAACATCGCCTTCGTCGGAACAACCTCCACTT
CCACCACCGGCACCGCCGTTGCCGCCACCTCACAGCCAGCTACATTTCTCAAATAATACT
CCATTTTGGAATGCAAGTGCAGCTTCCATGACTGATGTTCCATCAAGTTTATTTCCTTCT
AATTTGAATAATATTCCACAACTTCCCAATAACACAACAATTGATGAGAAAGCAAAGAAT
ATGGGAGAGGTTAGAGATATAAATAAAATTATATCAAAGAAAACCACCGGTACTGAAACA
TCAAATAAAAGACCAAGGAATGAAACTGCAACTCCTTCCCCAGCTTTTAAGGTGAGAAAA
GAGAAAATGGGAGACAGAATCACTACACTACAACAATTAGTCTCACCTTTTGGAAAGACA
GATACAGCTTCTGTATTATCAGAAGCAATTGAGTATATAAAGTTCCTCCATGATCAAATT
GGTGTATTAAGCGCCCCATATATGGAAAGTGGAGCATCCATGCAACATCTTCAGAGTGAT
ATTAAATCCGAAGATGTTAGAGAAGGAAGAAATAAAGATTTGAGAAGTCGAGGATTATGT
TTGGTACCAATTTCAAGTACTTTTCCAGTAACTCATGAGACCAATGTTGATTTATGGACA
CCTACTTTTGGATCAACTTTTAGATAA