Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064373
CDS Infomation

pacid=37479728 polypeptide=PGSC0003DMP400043405 locus=PGSC0003DMG400025010 ID=PGSC0003DMT400064373.v4.03 annot-version=v4.03
Sequence

ATGAGTATGAGTATGGCAGATGAAGCGGAAGACGCCATATTGGCATATCTCAAAGACAAC
GATGAGATTTCAAATTCTGCTGACTTTGCCCAGGATTTGGGTTTTAGCCATGACGACATC
GTCAATGTCATTCGCAGACTCCATGGCTTTCGACTTGTCGATGCTAAGGACATTAGGAGA
GAGAGATGGGTGCTTACTGAAGAGGGGAAAACTTATGCTGCTGTAGGTTCTCCAGAATTT
CAGCTTTTCTCAGCAGTACCACCGGAGGGAATTGCGCGGGAAGACTTGCAGAAAAAATTG
GATCCTGCAGTTTATAAAATTGGTTGTCAGCAAGCTATAAAGAACAAGTGGGTGGAGATG
GCAAAAACACTTGTGTCAAAGAAGGTCCAACATGCTGATGACAAAGTTAAAAATTTGCTG
TTGCGGATACAAAATGACGAGGCTGTCAATCAGGAAGATATTGATGCTCTAAAGCGAAGA
AAACTAACAATTCAGCAGGTTTGGAAAGGAAATTCCGTAAGAAAAGGTCCCGAATATGCC
CCCAAAAGGAAAAGAGCAGCGACTGATCTCACTCGGGAAAATTTACAGAGGGGTGACTGG
AAGGAATTGGAATTTAAAGAGTACAACTTCAGTGCTAAAGGTCAGCCAGTTGAAGGCGGC
CATCTTCATCCAATCCTCAAGGTTAGGCGGCAGGTACAAACGATTTTTCTTAATATGGGG
TTTGAGGAGATGCCAACAAATAATTATGTCGAAAGCAGTTTTTGGAACTTCGATGCACTT
TTCCAGCCCCAACAGCACCCTGCCCGTGATTCACATGATACTTTCTTTTTGAAAGTGCCT
TCCTCTACAAAGATGCTGCCAGAAGATTATGTTGAGCGGGTAAAAGAAATTCATGAATCT
GGTGGTTACCAATCTAGGGGATATGGGTATGATTGGAAAAGAGAGGAAGCGAACAAGAAT
CTTTTGCGGACACACACTACTGCTGTTTCGACAAGAATGTTGTATGCATTAGCTCAGAAG
CCATTCGCCCCCAAGAAATACTATTCTATTGATCGTGTTTTCAGAAATGAAGCAGTTGAT
CGGACACATCTTGCTGAATTTCATCAGATAGAAGGTTTAATATGTGATCGTGGACTTACT
CTTGGTGACCTGATTGGTGTTCTTCATGACTTCTTTTCTCGTCTAGGAATGTCCAAGCTT
CGGTTCAAACCTGCTTATAATCCTTATACTGAACCCAGCATGGAAATTTTCAGCTACCAT
GAAGGCTTTAAGAAATGGGTGGAAGTTGGAAATTCTGGTATGTTTAGGCCTGAAATGCTT
CTTCCTATGGGTCTGCCAGAAGATGTTCGGGTTATTGCCTGGGGCCTTTCCCTTGAGAGG
CCCACCATGATTCTCTACGGAATTGACAACATCAGAGATCTTTTCGGTCCCAAGGTGGAT
CTAGGTCTCATCAAAAGAAATCCAATATGCCGGCTTGGACTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400043405
PEP Infomation

pacid=37479728 transcript=PGSC0003DMT400064373 locus=PGSC0003DMG400025010 ID=PGSC0003DMT400064373.v4.03 annot-version=v4.03
Sequence

MSMSMADEAEDAILAYLKDNDEISNSADFAQDLGFSHDDIVNVIRRLHGFRLVDAKDIRR
ERWVLTEEGKTYAAVGSPEFQLFSAVPPEGIAREDLQKKLDPAVYKIGCQQAIKNKWVEM
AKTLVSKKVQHADDKVKNLLLRIQNDEAVNQEDIDALKRRKLTIQQVWKGNSVRKGPEYA
PKRKRAATDLTRENLQRGDWKELEFKEYNFSAKGQPVEGGHLHPILKVRRQVQTIFLNMG
FEEMPTNNYVESSFWNFDALFQPQQHPARDSHDTFFLKVPSSTKMLPEDYVERVKEIHES
GGYQSRGYGYDWKREEANKNLLRTHTTAVSTRMLYALAQKPFAPKKYYSIDRVFRNEAVD
RTHLAEFHQIEGLICDRGLTLGDLIGVLHDFFSRLGMSKLRFKPAYNPYTEPSMEIFSYH
EGFKKWVEVGNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYGIDNIRDLFGPKVD
LGLIKRNPICRLGL*

Transcript Sequence

Transcript ID

PGSC0003DMT400064373
Transcript Infomation

pacid=37479728 locus=PGSC0003DMG400025010 ID=PGSC0003DMT400064373.v4.03 annot-version=v4.03
Sequence

ATGAGTATGAGTATGGCAGATGAAGCGGAAGACGCCATATTGGCATATCTCAAAGACAAC
GATGAGATTTCAAATTCTGCTGACTTTGCCCAGGATTTGGGTTTTAGCCATGACGACATC
GTCAATGTCATTCGCAGACTCCATGGCTTTCGACTTGTCGATGCTAAGGACATTAGGAGA
GAGAGATGGGTGCTTACTGAAGAGGGGAAAACTTATGCTGCTGTAGGTTCTCCAGAATTT
CAGCTTTTCTCAGCAGTACCACCGGAGGGAATTGCGCGGGAAGACTTGCAGAAAAAATTG
GATCCTGCAGTTTATAAAATTGGTTGTCAGCAAGCTATAAAGAACAAGTGGGTGGAGATG
GCAAAAACACTTGTGTCAAAGAAGGTCCAACATGCTGATGACAAAGTTAAAAATTTGCTG
TTGCGGATACAAAATGACGAGGCTGTCAATCAGGAAGATATTGATGCTCTAAAGCGAAGA
AAACTAACAATTCAGCAGGTTTGGAAAGGAAATTCCGTAAGAAAAGGTCCCGAATATGCC
CCCAAAAGGAAAAGAGCAGCGACTGATCTCACTCGGGAAAATTTACAGAGGGGTGACTGG
AAGGAATTGGAATTTAAAGAGTACAACTTCAGTGCTAAAGGTCAGCCAGTTGAAGGCGGC
CATCTTCATCCAATCCTCAAGGTTAGGCGGCAGGTACAAACGATTTTTCTTAATATGGGG
TTTGAGGAGATGCCAACAAATAATTATGTCGAAAGCAGTTTTTGGAACTTCGATGCACTT
TTCCAGCCCCAACAGCACCCTGCCCGTGATTCACATGATACTTTCTTTTTGAAAGTGCCT
TCCTCTACAAAGATGCTGCCAGAAGATTATGTTGAGCGGGTAAAAGAAATTCATGAATCT
GGTGGTTACCAATCTAGGGGATATGGGTATGATTGGAAAAGAGAGGAAGCGAACAAGAAT
CTTTTGCGGACACACACTACTGCTGTTTCGACAAGAATGTTGTATGCATTAGCTCAGAAG
CCATTCGCCCCCAAGAAATACTATTCTATTGATCGTGTTTTCAGAAATGAAGCAGTTGAT
CGGACACATCTTGCTGAATTTCATCAGATAGAAGGTTTAATATGTGATCGTGGACTTACT
CTTGGTGACCTGATTGGTGTTCTTCATGACTTCTTTTCTCGTCTAGGAATGTCCAAGCTT
CGGTTCAAACCTGCTTATAATCCTTATACTGAACCCAGCATGGAAATTTTCAGCTACCAT
GAAGGCTTTAAGAAATGGGTGGAAGTTGGAAATTCTGGTATGTTTAGGCCTGAAATGCTT
CTTCCTATGGGTCTGCCAGAAGATGTTCGGGTTATTGCCTGGGGCCTTTCCCTTGAGAGG
CCCACCATGATTCTCTACGGAATTGACAACATCAGAGATCTTTTCGGTCCCAAGGTGGAT
CTAGGTCTCATCAAAAGAAATCCAATATGCCGGCTTGGACTTTAG