Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064366
CDS Infomation

pacid=37480349 polypeptide=PGSC0003DMP400043398 locus=PGSC0003DMG400025006 ID=PGSC0003DMT400064366.v4.03 annot-version=v4.03
Sequence

ATGAGCAAAGCAAGAGAAGGAGAAGGCAAGAACGAGTGCTTTCACGATTCTCTTGATCGT
TTGCTTTCTTCTGCAAACACTTCGTGTTCCTCTTCTTCTTCGCCTTCTGAAGACGAAGGA
GAGGAAGGTAGAGATTGTATTTCAAATTGGGGTTTCCCCAATTATGCAATGGGAGTTTCG
AATAACTATGATGTGTGGATCTCTGAACCTTCCTCTATTGAAGAACGCCGACTCCGGCTT
TTTCGTCAAATGGGTCTCAGCCGTGGTGCTGGCAGATCGGTTTCATCAGTTCATTTGAAG
TGTCAAGCTGTTAGTGCTGAAGGTATACCTAATTGTAGTAGTTCCCAAGCTAGTAGTGCT
AAGTGTAGTGTTTCTGGGAGCGTTCCATCAAAATTGAATGGCGATTCCAATTGCAATAGT
TCTTCAGTTCATAAAAGTAGTGATATTCTTTGTGTTAATTCTATTTCCTCGTCATCAGTA
TCTGTCAATGTAGCCAATGGTGGTGAATGTATAGTTGTAAATAATGATGGAAACTCAGGT
CAAAGTCGCGGTGATGATCAATTACATGAGGACAATGGATCTGCATTGACGATTGGAGCT
GTTTCCAGGGACAATGAGAGCTGTAATTTGATGCCGGTAGTGGAGAATGGTGAGGTTGAG
GATGATTCAGAATCAAATAGAGATGTTGAAATTGAGGAGAGTGCGTGCACAATAAAGAAT
CTCGATAATGGAAAGGAATTTGTGGTTAATGAAGTGAGGGAGGATGGGATGTGGAACAAG
CTTAAGGAAGTCAGTACAGGAAAGCAGTTGACTATCGAAGAATTTGATGTGTGTGTTGGA
ACTTCACCAATTGTTCAGGAATTGATGAGAAGACAGAATGTGGAAGATGGGAATAATAAT
AATTTGGATTGTAATACAAACGGGATTGGTGGGACTGGTCCTAAGAATAAAAAGAGGGGA
AGCTGGCTGAAGAGCATTAGAAATGTGGCTAGCTCGGTGACAGGTCATAAGGAACGTCGG
AGTAGTGATGAGAGGGATACGTCTTCTGAAAAGGGTGGTCGAAGGTCAAGCTCTGCCACA
GATGATAGTCAGGATGCTTCCCCTCATGGACCTGAAAGAGTTAGGGTGAGGCAGTATGGT
AAGTCCAGCAAAGAACTTACAGCTCTTTATAAGAGCCTAGAGATTCAGGCACACACTGGG
TCTATTTGGACCATACAATTTAGTTTGGATGGAAAATATCTTGCTAGTGCCGGTGAGGAC
CGCGTCATACATGTTAGGGAGGTTACATCATCAGAGAGAAAGGGTGATCTATTGCTGGAT
AAACCAGAAGATGGGAATTTGAATCTATTGCTTTCGGCAAATGCTTCTCCCGAGCCAACT
ACTATGTCACCAAATTTTGATGTCCACTTGGAGAAGAAACGAAGAGGAAGGTCATCTGTT
AGTCAAAAATCAATGGGCTTTGACCATATTTTGGTGCCTGAGACAGTTTTTGCTCTTTCA
GAAAAGCCCATCTGTTCATTTGAGGGCCATTTGGATGATGTGCTTGACCTCTCGTGGTCC
AAGTCTCAGCAATTGCTCTCATCATCAATGGACAAAACAGTGCGGCTTTGGGATTTGTCT
AGCAAAACTTGTTTGAAGATCTTCTCACACAGTGACTATGTAACCTGCATCCAGTTTAAC
CCTGTTGATGATAGATACTTCATCAGTGGCTCCCTAGATGCTAAGGTTCGCATATGGAGC
ATTCCTGAGCGGCAAGTTGTTGATTGGAATGATCTGCATGAGATGGTCACTGCTGCTTGC
TACACACCAGATGGTCAGGGGGCACTTGTTGGGTCATACAAGGGGAGCTGTCATTTGTAC
AACATATTAGATAACAAATTGCAGCAAAAAGCTCAAATCAATCTGCAGAATAAGAAGAAG
AGGACTCACCAAAGGAAAATTACTGGTTTCCAGTTTGTGCCAGGAAGTATGTCACAAGTG
CTTATAACATCTGCAGACTCAAGAATTCGGGTTGTTGATGATGCTGATCTTTTTCACAAG
TTCAAAGGTTTCCGCAATACGAGTAGGCAAATCTCAGCATCTATGACAGCGGATGGTAGA
TATGTGGTCTGTGCTAGTGAGGATTCACATGTCTATATCTGGAAACACGAAAGTCACTCT
CGACCAAGCAGAAATAAAGGTGTTACTGTTACACAGTCTTATGAGCATTTTCATTCTCAA
GATGTTTCAGTGGCCATTCCTTGGCCTGGTATGTTGGATACTTGGAGATATCATACTTCA
TCTTCCGGGGAACAAAGTGGTCATGATGGTCTTGACGAAGTCTCCACTGCTAACCATCCA
CCTTCACCTGTTGAAGAGATTGACAACGAGTGCTCGCCATTGACTTCTGGCTGTGGTAAC
AGTCCTCTTCATGGAACCATATCTAGTGCCACAAACAACTACTTTTTTGATAGAATCTCA
GCAACATGGCCCGAGGAAAAACTTCTCTTAGCTTCTAAATATCGTAGTCCTCGAGTGAGT
ACAGATGCTAGTATCGACTTCTCCAATGGCTTAACTCAAACAAAGTTCTGCTGGGGTTTG
GTCATTGTAACTGCAAGCCACCGAGGGGAGATCAGGACTTTCCAGAATTTTGGCTTACCA
ATTCGGATTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400043398
PEP Infomation

pacid=37480349 transcript=PGSC0003DMT400064366 locus=PGSC0003DMG400025006 ID=PGSC0003DMT400064366.v4.03 annot-version=v4.03
Sequence

MSKAREGEGKNECFHDSLDRLLSSANTSCSSSSSPSEDEGEEGRDCISNWGFPNYAMGVS
NNYDVWISEPSSIEERRLRLFRQMGLSRGAGRSVSSVHLKCQAVSAEGIPNCSSSQASSA
KCSVSGSVPSKLNGDSNCNSSSVHKSSDILCVNSISSSSVSVNVANGGECIVVNNDGNSG
QSRGDDQLHEDNGSALTIGAVSRDNESCNLMPVVENGEVEDDSESNRDVEIEESACTIKN
LDNGKEFVVNEVREDGMWNKLKEVSTGKQLTIEEFDVCVGTSPIVQELMRRQNVEDGNNN
NLDCNTNGIGGTGPKNKKRGSWLKSIRNVASSVTGHKERRSSDERDTSSEKGGRRSSSAT
DDSQDASPHGPERVRVRQYGKSSKELTALYKSLEIQAHTGSIWTIQFSLDGKYLASAGED
RVIHVREVTSSERKGDLLLDKPEDGNLNLLLSANASPEPTTMSPNFDVHLEKKRRGRSSV
SQKSMGFDHILVPETVFALSEKPICSFEGHLDDVLDLSWSKSQQLLSSSMDKTVRLWDLS
SKTCLKIFSHSDYVTCIQFNPVDDRYFISGSLDAKVRIWSIPERQVVDWNDLHEMVTAAC
YTPDGQGALVGSYKGSCHLYNILDNKLQQKAQINLQNKKKRTHQRKITGFQFVPGSMSQV
LITSADSRIRVVDDADLFHKFKGFRNTSRQISASMTADGRYVVCASEDSHVYIWKHESHS
RPSRNKGVTVTQSYEHFHSQDVSVAIPWPGMLDTWRYHTSSSGEQSGHDGLDEVSTANHP
PSPVEEIDNECSPLTSGCGNSPLHGTISSATNNYFFDRISATWPEEKLLLASKYRSPRVS
TDASIDFSNGLTQTKFCWGLVIVTASHRGEIRTFQNFGLPIRI*

Transcript Sequence

Transcript ID

PGSC0003DMT400064366
Transcript Infomation

pacid=37480349 locus=PGSC0003DMG400025006 ID=PGSC0003DMT400064366.v4.03 annot-version=v4.03
Sequence

ATGAGCAAAGCAAGAGAAGGAGAAGGCAAGAACGAGTGCTTTCACGATTCTCTTGATCGT
TTGCTTTCTTCTGCAAACACTTCGTGTTCCTCTTCTTCTTCGCCTTCTGAAGACGAAGGA
GAGGAAGGTAGAGATTGTATTTCAAATTGGGGTTTCCCCAATTATGCAATGGGAGTTTCG
AATAACTATGATGTGTGGATCTCTGAACCTTCCTCTATTGAAGAACGCCGACTCCGGCTT
TTTCGTCAAATGGGTCTCAGCCGTGGTGCTGGCAGATCGGTTTCATCAGTTCATTTGAAG
TGTCAAGCTGTTAGTGCTGAAGGTATACCTAATTGTAGTAGTTCCCAAGCTAGTAGTGCT
AAGTGTAGTGTTTCTGGGAGCGTTCCATCAAAATTGAATGGCGATTCCAATTGCAATAGT
TCTTCAGTTCATAAAAGTAGTGATATTCTTTGTGTTAATTCTATTTCCTCGTCATCAGTA
TCTGTCAATGTAGCCAATGGTGGTGAATGTATAGTTGTAAATAATGATGGAAACTCAGGT
CAAAGTCGCGGTGATGATCAATTACATGAGGACAATGGATCTGCATTGACGATTGGAGCT
GTTTCCAGGGACAATGAGAGCTGTAATTTGATGCCGGTAGTGGAGAATGGTGAGGTTGAG
GATGATTCAGAATCAAATAGAGATGTTGAAATTGAGGAGAGTGCGTGCACAATAAAGAAT
CTCGATAATGGAAAGGAATTTGTGGTTAATGAAGTGAGGGAGGATGGGATGTGGAACAAG
CTTAAGGAAGTCAGTACAGGAAAGCAGTTGACTATCGAAGAATTTGATGTGTGTGTTGGA
ACTTCACCAATTGTTCAGGAATTGATGAGAAGACAGAATGTGGAAGATGGGAATAATAAT
AATTTGGATTGTAATACAAACGGGATTGGTGGGACTGGTCCTAAGAATAAAAAGAGGGGA
AGCTGGCTGAAGAGCATTAGAAATGTGGCTAGCTCGGTGACAGGTCATAAGGAACGTCGG
AGTAGTGATGAGAGGGATACGTCTTCTGAAAAGGGTGGTCGAAGGTCAAGCTCTGCCACA
GATGATAGTCAGGATGCTTCCCCTCATGGACCTGAAAGAGTTAGGGTGAGGCAGTATGGT
AAGTCCAGCAAAGAACTTACAGCTCTTTATAAGAGCCTAGAGATTCAGGCACACACTGGG
TCTATTTGGACCATACAATTTAGTTTGGATGGAAAATATCTTGCTAGTGCCGGTGAGGAC
CGCGTCATACATGTTAGGGAGGTTACATCATCAGAGAGAAAGGGTGATCTATTGCTGGAT
AAACCAGAAGATGGGAATTTGAATCTATTGCTTTCGGCAAATGCTTCTCCCGAGCCAACT
ACTATGTCACCAAATTTTGATGTCCACTTGGAGAAGAAACGAAGAGGAAGGTCATCTGTT
AGTCAAAAATCAATGGGCTTTGACCATATTTTGGTGCCTGAGACAGTTTTTGCTCTTTCA
GAAAAGCCCATCTGTTCATTTGAGGGCCATTTGGATGATGTGCTTGACCTCTCGTGGTCC
AAGTCTCAGCAATTGCTCTCATCATCAATGGACAAAACAGTGCGGCTTTGGGATTTGTCT
AGCAAAACTTGTTTGAAGATCTTCTCACACAGTGACTATGTAACCTGCATCCAGTTTAAC
CCTGTTGATGATAGATACTTCATCAGTGGCTCCCTAGATGCTAAGGTTCGCATATGGAGC
ATTCCTGAGCGGCAAGTTGTTGATTGGAATGATCTGCATGAGATGGTCACTGCTGCTTGC
TACACACCAGATGGTCAGGGGGCACTTGTTGGGTCATACAAGGGGAGCTGTCATTTGTAC
AACATATTAGATAACAAATTGCAGCAAAAAGCTCAAATCAATCTGCAGAATAAGAAGAAG
AGGACTCACCAAAGGAAAATTACTGGTTTCCAGTTTGTGCCAGGAAGTATGTCACAAGTG
CTTATAACATCTGCAGACTCAAGAATTCGGGTTGTTGATGATGCTGATCTTTTTCACAAG
TTCAAAGGTTTCCGCAATACGAGTAGGCAAATCTCAGCATCTATGACAGCGGATGGTAGA
TATGTGGTCTGTGCTAGTGAGGATTCACATGTCTATATCTGGAAACACGAAAGTCACTCT
CGACCAAGCAGAAATAAAGGTGTTACTGTTACACAGTCTTATGAGCATTTTCATTCTCAA
GATGTTTCAGTGGCCATTCCTTGGCCTGGTATGTTGGATACTTGGAGATATCATACTTCA
TCTTCCGGGGAACAAAGTGGTCATGATGGTCTTGACGAAGTCTCCACTGCTAACCATCCA
CCTTCACCTGTTGAAGAGATTGACAACGAGTGCTCGCCATTGACTTCTGGCTGTGGTAAC
AGTCCTCTTCATGGAACCATATCTAGTGCCACAAACAACTACTTTTTTGATAGAATCTCA
GCAACATGGCCCGAGGAAAAACTTCTCTTAGCTTCTAAATATCGTAGTCCTCGAGTGAGT
ACAGATGCTAGTATCGACTTCTCCAATGGCTTAACTCAAACAAAGTTCTGCTGGGGTTTG
GTCATTGTAACTGCAAGCCACCGAGGGGAGATCAGGACTTTCCAGAATTTTGGCTTACCA
ATTCGGATTTAA