Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064352
CDS Infomation

pacid=37476799 polypeptide=PGSC0003DMP400043391 locus=PGSC0003DMG400025002 ID=PGSC0003DMT400064352.v4.03 annot-version=v4.03
Sequence

ATGGCCGCATCAAGGTGCAGAATTTTGGTGAAGGGAAGTGTTGAAAGGGTTGCTCATTCC
CTTCTTGCCAGCACCAAGGCCAGGAACTCAGTGGTTTGGACAACGTGCCCTACCGGACTT
TCTTTTATCTTTTCCAGATTACATTCACAATGTAGAGTTTGTCATAGAGGATTTACCTCC
AGCATTTTCTATGAGGCAAAAGGAACCTTATGGAAGACGTACAATTCGAAAGCTAGATGT
TTGTTCCTTACGAATGAGACAGTCTCACACCATGCTCGAGTTGCCTGGAAACGGCTACTT
CAGATTCATTCAAGCTGTGGAACAATTATGCCACCAATAAGTAGGGTTACATGTGTGATG
AGCCTTGCTTTGTCTCGCTCACATCTGGTATCTCCTGGCATTTTGGCCTTCCTTATTGGA
CAGCTAGCATGGAATCAAAGTGTGCTTGCAGAAGCAGAAGGTTTCACATCCCCGGAATCG
CTCTACATGCATGCAAAGGATGGACATATCTACTTGACTTCATTTATCTTCTTGCTTTTA
GAGGGCTTGATATTGCTCTCGAGGGCAGTATACTTAGCTTTGTTGTTCACCCCTTGTATG
CTAATGGCTCCTTTTGCGGACTCCTTTGGTATTGAGTTTAGGAAGAAGTGGCTTCGTGCT
GTGAGAAGAACTCTAGAGAAGGCAGGTCCAGCATTCATTAAGTGGGGTCAATGGGCAGCA
GCAAGGCCAGATCTGTTTCCAGATGATATGTGTAATGAACTTGAAGAACTCCACTCAAAG
GCACCAGCACATAGCTATGCATACACAAAAAGAAGCATTGAAAAGGCATTTGGACGGAAG
CTGCCTGAAATATTTGAAAATTTTGAGGAGGAGCCTGTCGCATCGGGTAGTATTGCTCAA
ATTCATCGGGCAACCTTGAAATTCCGATATCCTAGACAACGGGTTAAACCCATTCGTGTC
GCTGTCAAAGTTAGGCACCCAGGCGTTGGTGAATCTATCAGGAGGGATTTCGTACTAATT
AACATGTTTGCAAAAGTTTCAAAGGTCTTCCCAACTTTGAAGTGGTTGAGACTGGATGAA
AGCATACAGCAGTTTGCGGTCTTTATGATGTCACAAGTTGATCTTTCTAGGGAAGCAGCT
AACTTGAGTCGTTTTATATATAACTTCCGCAGATGGAAGGATGTATCATTTCCCAGACCT
CTATATCCTTTGGTGCATCCTGCAGTTTTAGTGGAAACCTATGAAGACGGTGAAAATATC
TTGCGCTACATTGAAGAGCTTGAAGAACCTATGAAAGAGTTTGAAGGACGTGAGTGCGTC
CGAACTGCCCTTGCTCACATTGGGACTCATGCACTACTGAAGATGATGTTGGTGGATAAT
TTCATACATGCAGACATGCATCCTGGGAACATTCTTGTTAGATCACCGCAAGACAGAGCT
TCAGGGAAAGGACTTTTCAAATCGAGACCTCATGTGGTCTTCCTAGATGTGGGTATGACT
GCTGAGCTATCCAATAAGGACAGACTCCTCCTGCTGGAGTTCTTTAAGGCTGTGGCACTT
CGAGATGGCCGCACTGCTGCAGAAAGTACTCTTGGACTATCTAAACAACAGAGCTGTCCG
AACCCTGAGGAATTCATCAAGGACGTGGAGGGAACTTTTGACTTCTGGAAGACAGCTGAA
GGGGGTGGCATTCATCCGGCAGATTGCATGCAACAATTGCTTGAGCAAGTTAGACGTCAT
AGGGTGAATATTGATGGCAACATTTGCACTGTGATTGTGACTACTTTGGTGTTGGAGGGA
TGGCAGCGGAAACTGGACCCTGAATACGACGTGCTACAGACACTGCAAAAGTTGCTTTTC
AAAGACGATTGGGCAGAGTCTCTCTTTCACACAATTGGAGGGTTGATGGCACCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400043391
PEP Infomation

pacid=37476799 transcript=PGSC0003DMT400064352 locus=PGSC0003DMG400025002 ID=PGSC0003DMT400064352.v4.03 annot-version=v4.03
Sequence

MAASRCRILVKGSVERVAHSLLASTKARNSVVWTTCPTGLSFIFSRLHSQCRVCHRGFTS
SIFYEAKGTLWKTYNSKARCLFLTNETVSHHARVAWKRLLQIHSSCGTIMPPISRVTCVM
SLALSRSHLVSPGILAFLIGQLAWNQSVLAEAEGFTSPESLYMHAKDGHIYLTSFIFLLL
EGLILLSRAVYLALLFTPCMLMAPFADSFGIEFRKKWLRAVRRTLEKAGPAFIKWGQWAA
ARPDLFPDDMCNELEELHSKAPAHSYAYTKRSIEKAFGRKLPEIFENFEEEPVASGSIAQ
IHRATLKFRYPRQRVKPIRVAVKVRHPGVGESIRRDFVLINMFAKVSKVFPTLKWLRLDE
SIQQFAVFMMSQVDLSREAANLSRFIYNFRRWKDVSFPRPLYPLVHPAVLVETYEDGENI
LRYIEELEEPMKEFEGRECVRTALAHIGTHALLKMMLVDNFIHADMHPGNILVRSPQDRA
SGKGLFKSRPHVVFLDVGMTAELSNKDRLLLLEFFKAVALRDGRTAAESTLGLSKQQSCP
NPEEFIKDVEGTFDFWKTAEGGGIHPADCMQQLLEQVRRHRVNIDGNICTVIVTTLVLEG
WQRKLDPEYDVLQTLQKLLFKDDWAESLFHTIGGLMAP*

Transcript Sequence

Transcript ID

PGSC0003DMT400064352
Transcript Infomation

pacid=37476799 locus=PGSC0003DMG400025002 ID=PGSC0003DMT400064352.v4.03 annot-version=v4.03
Sequence

ATGGCCGCATCAAGGTGCAGAATTTTGGTGAAGGGAAGTGTTGAAAGGGTTGCTCATTCC
CTTCTTGCCAGCACCAAGGCCAGGAACTCAGTGGTTTGGACAACGTGCCCTACCGGACTT
TCTTTTATCTTTTCCAGATTACATTCACAATGTAGAGTTTGTCATAGAGGATTTACCTCC
AGCATTTTCTATGAGGCAAAAGGAACCTTATGGAAGACGTACAATTCGAAAGCTAGATGT
TTGTTCCTTACGAATGAGACAGTCTCACACCATGCTCGAGTTGCCTGGAAACGGCTACTT
CAGATTCATTCAAGCTGTGGAACAATTATGCCACCAATAAGTAGGGTTACATGTGTGATG
AGCCTTGCTTTGTCTCGCTCACATCTGGTATCTCCTGGCATTTTGGCCTTCCTTATTGGA
CAGCTAGCATGGAATCAAAGTGTGCTTGCAGAAGCAGAAGGTTTCACATCCCCGGAATCG
CTCTACATGCATGCAAAGGATGGACATATCTACTTGACTTCATTTATCTTCTTGCTTTTA
GAGGGCTTGATATTGCTCTCGAGGGCAGTATACTTAGCTTTGTTGTTCACCCCTTGTATG
CTAATGGCTCCTTTTGCGGACTCCTTTGGTATTGAGTTTAGGAAGAAGTGGCTTCGTGCT
GTGAGAAGAACTCTAGAGAAGGCAGGTCCAGCATTCATTAAGTGGGGTCAATGGGCAGCA
GCAAGGCCAGATCTGTTTCCAGATGATATGTGTAATGAACTTGAAGAACTCCACTCAAAG
GCACCAGCACATAGCTATGCATACACAAAAAGAAGCATTGAAAAGGCATTTGGACGGAAG
CTGCCTGAAATATTTGAAAATTTTGAGGAGGAGCCTGTCGCATCGGGTAGTATTGCTCAA
ATTCATCGGGCAACCTTGAAATTCCGATATCCTAGACAACGGGTTAAACCCATTCGTGTC
GCTGTCAAAGTTAGGCACCCAGGCGTTGGTGAATCTATCAGGAGGGATTTCGTACTAATT
AACATGTTTGCAAAAGTTTCAAAGGTCTTCCCAACTTTGAAGTGGTTGAGACTGGATGAA
AGCATACAGCAGTTTGCGGTCTTTATGATGTCACAAGTTGATCTTTCTAGGGAAGCAGCT
AACTTGAGTCGTTTTATATATAACTTCCGCAGATGGAAGGATGTATCATTTCCCAGACCT
CTATATCCTTTGGTGCATCCTGCAGTTTTAGTGGAAACCTATGAAGACGGTGAAAATATC
TTGCGCTACATTGAAGAGCTTGAAGAACCTATGAAAGAGTTTGAAGGACGTGAGTGCGTC
CGAACTGCCCTTGCTCACATTGGGACTCATGCACTACTGAAGATGATGTTGGTGGATAAT
TTCATACATGCAGACATGCATCCTGGGAACATTCTTGTTAGATCACCGCAAGACAGAGCT
TCAGGGAAAGGACTTTTCAAATCGAGACCTCATGTGGTCTTCCTAGATGTGGGTATGACT
GCTGAGCTATCCAATAAGGACAGACTCCTCCTGCTGGAGTTCTTTAAGGCTGTGGCACTT
CGAGATGGCCGCACTGCTGCAGAAAGTACTCTTGGACTATCTAAACAACAGAGCTGTCCG
AACCCTGAGGAATTCATCAAGGACGTGGAGGGAACTTTTGACTTCTGGAAGACAGCTGAA
GGGGGTGGCATTCATCCGGCAGATTGCATGCAACAATTGCTTGAGCAAGTTAGACGTCAT
AGGGTGAATATTGATGGCAACATTTGCACTGTGATTGTGACTACTTTGGTGTTGGAGGGA
TGGCAGCGGAAACTGGACCCTGAATACGACGTGCTACAGACACTGCAAAAGTTGCTTTTC
AAAGACGATTGGGCAGAGTCTCTCTTTCACACAATTGGAGGGTTGATGGCACCATAA