Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064351
CDS Infomation

pacid=37478192 polypeptide=PGSC0003DMP400043390 locus=PGSC0003DMG400025001 ID=PGSC0003DMT400064351.v4.03 annot-version=v4.03
Sequence

ATGGTGCAAGAGAGAGCTGGAAATGGAGCACTTTCAAATGGGAATTCGGCAGGTGGAAAT
GCTTATACAATTGACTTGAATACTTTCAGTAAGCGACTGAAGGCCTTATATTCACACTGG
CACAAACACAAGGATGACCTTTGGGCCTCTTCTGATGTCCTTGCTATAGCTACGCCGCCA
CCTTCGGAGGACTTGAGATACTTGAAATCCTCAGCTTTAAATATTTGGTTGCTAGGGTAT
GAGTTTCCTGAGACGATTATGGTTTTCGGAGACAAGCAAATACATTTTCTGTGTAGCCAG
AAGAAAGCCTCATTGCTTAGTGTTGTAAAATCTGCTGCTAAAGAGGCTGTGGATGTGGAC
GTTATCCTGCATGTGAAGGCGAAAAATGAGGATGGGACTACTCAAATGGACAATGTGCTT
CACACTATCCGTATGCAGCCAAAGTCAGATGGTCCTGATACCACAGTCGTCATTGGATAT
ATTGCAAGAGAGGCCCCTGAAGGAAAACTCTTGGAGATATGGACCGATAAGATGAGAAAT
TCAAGCCTTACTCTTAGTGATATCTCAAATGGGCTGGCTGACCTCTTTGCTGTGAAGGAA
CAGAATGAGATAATAAATGTGAAGAAAGCTGCATATTTGACTGCTTCTGCAATGAAGAAC
TTTGTTGTTCCGAAGCTTGAGAAAGTTATTGACGAGGAGAAGAAAGTAACTCATTCTTTA
TTAATGGATGACACAGAAAAGGCTATTCTAGAACCTGCAAAAATTAAGGTGAAGCTGAAA
GCTGAGAATGTTGATATATGTTACCCCCCAATCTTCCAGAGTGGTGGGAATTTCGATCTT
AGACCTAGTGCTACAAGCAATGATGAACAGTTGTACTATGATTCTGCCAGTGTCATCATA
TGTGCAGTTGGATCACGATACAACAGTTACTGTTCAAATGTTGCCAGAACATTTCTCATT
GATTCAACTTCGACGCAGAACAAGGCTTATGAGGTTCTTCTTAAAGCTCACGAGGCAGCA
ATTGGTGCATTGAAGCCTGGAAACAAGCTTAGTTCCGTGTATCAAACAGCTCTTGAAGTG
GTTGAGAGGGATGCTCCTGAATTTGTTAGCAACCTGACAAAGTCTGCTGGGACTGGGATT
GGTCTTGAGTTCCGGGAGTCTGGGTTGATCATTAATGCTAAGAATGATAAGGTGCTGAGA
GCGGGAATGGTTTTCAACGTGTCACTTGGTTTCCACAATTTGCAAACTGGGACCACCACT
GAAAAGAGTAAGAATTTTTCACTTTTGTTAGCAGATACGGTTATCGTCACAAATGATGGC
CATGATGTGGTTACTCATTTGAGCTCTAAAGCCGTGAAGGATGTAGCCTATTCTTTCAAT
GAAGATGAGGAAGATGAGGAGGAGGTTAAGGTGAAAGCTGATTCAAGCAGGATGGAAGCC
TTGTATTCCAAGGCAACACTTAGGTCAAACAACCAAGAAGAGCTCCGGAGGCAGCATCAA
GCAGAACTTGCTCGTCAGAAGAATGAAGAAACTGCTCGTCGTCTTGCTGGTGGAGGAGCT
TTAACGGGGAATAACAGGGGTGCTGCTAGGGCCTCAAGTGACCTTGTTGCGTATAAGAGC
ATCAATGATCTACCACCTCCTAGGGATATGACTATTCAGGTTGACCAAAAGAATGAAGCC
ATTCTTCTACCAATATATGGTACTATGGTTCCTTTCCATGTGGCTACTGTTAAGACTGTT
TCAAGCCAGCAGGATACCAACCGTAACTGTTATATCCGTGTCATTTTCAATGTCCCTGGC
ACCCCTTTTACACCTGTTGATGCAAATGCTCTTAAGAATCAGGGTGCTATTTACCTGAAG
GAAGCTTCATTTCGTTCCAAGGATCCAAGGCACATAAGTGAAGTGGTTCAGCAGATTAAA
ACTCTTAGACGGAATGTTATGGCCAGGGAGTCTGAGAGAGCTGAAAGGGCAACTTTGGTG
ACTCAGGAAAAACTTGTACTTGCAGGGAATAAATTCAAACCAGTTAGGCTGTCTGACTTA
TCTATTCGTCCCTCTTTTGGTGGTCGTGCAAGAAAGCTTCCGGGTACATTGGAAGCTCAT
GTTAATGGTTTCCGGTACTCGACCTCAAGAACAGATGAGCGTGTTGACATCATGTTTGGC
AACATCAAGCATGCATTCTTCCAGCCAGCAGAGAAGGAGATGATTACCCTTCTTCACTTT
CATCTGCATAACCACATAATGGTAGGAAACAAGAAAACCAAGGATGTGCAATTCTATGTT
GAGGTAATGGATGTGGTGCAAACACTTGGAGGTGGAAAGCGGTCTGCCTATGACCCAGAT
GAGATTGAGGAAGAACAGAGAGAAAGAGACCGTAAGAACAAATTCAACATGGACTTCCAG
AATTTTGTGAACCGGGTGAATGATATGTGGAGCCAGCCCCAGCTTAAAGGACTCGACCTG
GAGTTTGATCAACCTCTGAGAGAACTTGGGTTCCATGGGGTGCCCTATAAATCATCAGCA
TTCATCGTGCCAACCTCGAGCTGTTTGGTTGAGCTGATAGAGACCCCATTTCTCGTGATA
ACCTTAAGTGATATTGAGATTGTCAACTTGGAGAGAGTTGGATTTGGGCAGAAGAATTTT
GATATGGCAATTGTCTTCAAGGACTTCAAGCGTGATGTCATGCGCATAGATTCCATCCCT
GTCTCCGCACTTGATGGCATCAAGGAGTGGCTTGACACAACTGACATCAAGTATTATGAG
AGCAAGATGAATCTGAATTGGCGTGAAGTATTGAAGACCATAACTGAAGATCCCCAAAGG
TTTATAGATGAAGGTGGTTGGGAATTTTTAAACATAGATGCTTCTGACTCAGAATCTGAA
AACTCAGAGGAGTCAGACCAAGGTTATGAACCCTCAGACGCTGAACCTGAGTCAGATTCA
GAAGACGAGGCCTCTGATAGTGAATCTCTGGTGGATTCCGAGGAAGAAGGGGAAGACTCA
GATGAAGACTCGGAGGAAGAAAAAGGCAAAACATGGGAAGAGTTGGAGAAGGAGGCAAGC
AATGCAGATAGGGAGAAAGGAGATGAACCTGACAGCGAGGATGAGAGGAGGAGAAAGAAG
AACTTTGGCAAGTCACGATCTGGTCCAAGTTCTGCTGGTTCTAAGCGAATGAAGTTTAGG
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400043390
PEP Infomation

pacid=37478192 transcript=PGSC0003DMT400064351 locus=PGSC0003DMG400025001 ID=PGSC0003DMT400064351.v4.03 annot-version=v4.03
Sequence

MVQERAGNGALSNGNSAGGNAYTIDLNTFSKRLKALYSHWHKHKDDLWASSDVLAIATPP
PSEDLRYLKSSALNIWLLGYEFPETIMVFGDKQIHFLCSQKKASLLSVVKSAAKEAVDVD
VILHVKAKNEDGTTQMDNVLHTIRMQPKSDGPDTTVVIGYIAREAPEGKLLEIWTDKMRN
SSLTLSDISNGLADLFAVKEQNEIINVKKAAYLTASAMKNFVVPKLEKVIDEEKKVTHSL
LMDDTEKAILEPAKIKVKLKAENVDICYPPIFQSGGNFDLRPSATSNDEQLYYDSASVII
CAVGSRYNSYCSNVARTFLIDSTSTQNKAYEVLLKAHEAAIGALKPGNKLSSVYQTALEV
VERDAPEFVSNLTKSAGTGIGLEFRESGLIINAKNDKVLRAGMVFNVSLGFHNLQTGTTT
EKSKNFSLLLADTVIVTNDGHDVVTHLSSKAVKDVAYSFNEDEEDEEEVKVKADSSRMEA
LYSKATLRSNNQEELRRQHQAELARQKNEETARRLAGGGALTGNNRGAARASSDLVAYKS
INDLPPPRDMTIQVDQKNEAILLPIYGTMVPFHVATVKTVSSQQDTNRNCYIRVIFNVPG
TPFTPVDANALKNQGAIYLKEASFRSKDPRHISEVVQQIKTLRRNVMARESERAERATLV
TQEKLVLAGNKFKPVRLSDLSIRPSFGGRARKLPGTLEAHVNGFRYSTSRTDERVDIMFG
NIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRSAYDPD
EIEEEQRERDRKNKFNMDFQNFVNRVNDMWSQPQLKGLDLEFDQPLRELGFHGVPYKSSA
FIVPTSSCLVELIETPFLVITLSDIEIVNLERVGFGQKNFDMAIVFKDFKRDVMRIDSIP
VSALDGIKEWLDTTDIKYYESKMNLNWREVLKTITEDPQRFIDEGGWEFLNIDASDSESE
NSEESDQGYEPSDAEPESDSEDEASDSESLVDSEEEGEDSDEDSEEEKGKTWEELEKEAS
NADREKGDEPDSEDERRRKKNFGKSRSGPSSAGSKRMKFR*

Transcript Sequence

Transcript ID

PGSC0003DMT400064351
Transcript Infomation

pacid=37478192 locus=PGSC0003DMG400025001 ID=PGSC0003DMT400064351.v4.03 annot-version=v4.03
Sequence

ATGGTGCAAGAGAGAGCTGGAAATGGAGCACTTTCAAATGGGAATTCGGCAGGTGGAAAT
GCTTATACAATTGACTTGAATACTTTCAGTAAGCGACTGAAGGCCTTATATTCACACTGG
CACAAACACAAGGATGACCTTTGGGCCTCTTCTGATGTCCTTGCTATAGCTACGCCGCCA
CCTTCGGAGGACTTGAGATACTTGAAATCCTCAGCTTTAAATATTTGGTTGCTAGGGTAT
GAGTTTCCTGAGACGATTATGGTTTTCGGAGACAAGCAAATACATTTTCTGTGTAGCCAG
AAGAAAGCCTCATTGCTTAGTGTTGTAAAATCTGCTGCTAAAGAGGCTGTGGATGTGGAC
GTTATCCTGCATGTGAAGGCGAAAAATGAGGATGGGACTACTCAAATGGACAATGTGCTT
CACACTATCCGTATGCAGCCAAAGTCAGATGGTCCTGATACCACAGTCGTCATTGGATAT
ATTGCAAGAGAGGCCCCTGAAGGAAAACTCTTGGAGATATGGACCGATAAGATGAGAAAT
TCAAGCCTTACTCTTAGTGATATCTCAAATGGGCTGGCTGACCTCTTTGCTGTGAAGGAA
CAGAATGAGATAATAAATGTGAAGAAAGCTGCATATTTGACTGCTTCTGCAATGAAGAAC
TTTGTTGTTCCGAAGCTTGAGAAAGTTATTGACGAGGAGAAGAAAGTAACTCATTCTTTA
TTAATGGATGACACAGAAAAGGCTATTCTAGAACCTGCAAAAATTAAGGTGAAGCTGAAA
GCTGAGAATGTTGATATATGTTACCCCCCAATCTTCCAGAGTGGTGGGAATTTCGATCTT
AGACCTAGTGCTACAAGCAATGATGAACAGTTGTACTATGATTCTGCCAGTGTCATCATA
TGTGCAGTTGGATCACGATACAACAGTTACTGTTCAAATGTTGCCAGAACATTTCTCATT
GATTCAACTTCGACGCAGAACAAGGCTTATGAGGTTCTTCTTAAAGCTCACGAGGCAGCA
ATTGGTGCATTGAAGCCTGGAAACAAGCTTAGTTCCGTGTATCAAACAGCTCTTGAAGTG
GTTGAGAGGGATGCTCCTGAATTTGTTAGCAACCTGACAAAGTCTGCTGGGACTGGGATT
GGTCTTGAGTTCCGGGAGTCTGGGTTGATCATTAATGCTAAGAATGATAAGGTGCTGAGA
GCGGGAATGGTTTTCAACGTGTCACTTGGTTTCCACAATTTGCAAACTGGGACCACCACT
GAAAAGAGTAAGAATTTTTCACTTTTGTTAGCAGATACGGTTATCGTCACAAATGATGGC
CATGATGTGGTTACTCATTTGAGCTCTAAAGCCGTGAAGGATGTAGCCTATTCTTTCAAT
GAAGATGAGGAAGATGAGGAGGAGGTTAAGGTGAAAGCTGATTCAAGCAGGATGGAAGCC
TTGTATTCCAAGGCAACACTTAGGTCAAACAACCAAGAAGAGCTCCGGAGGCAGCATCAA
GCAGAACTTGCTCGTCAGAAGAATGAAGAAACTGCTCGTCGTCTTGCTGGTGGAGGAGCT
TTAACGGGGAATAACAGGGGTGCTGCTAGGGCCTCAAGTGACCTTGTTGCGTATAAGAGC
ATCAATGATCTACCACCTCCTAGGGATATGACTATTCAGGTTGACCAAAAGAATGAAGCC
ATTCTTCTACCAATATATGGTACTATGGTTCCTTTCCATGTGGCTACTGTTAAGACTGTT
TCAAGCCAGCAGGATACCAACCGTAACTGTTATATCCGTGTCATTTTCAATGTCCCTGGC
ACCCCTTTTACACCTGTTGATGCAAATGCTCTTAAGAATCAGGGTGCTATTTACCTGAAG
GAAGCTTCATTTCGTTCCAAGGATCCAAGGCACATAAGTGAAGTGGTTCAGCAGATTAAA
ACTCTTAGACGGAATGTTATGGCCAGGGAGTCTGAGAGAGCTGAAAGGGCAACTTTGGTG
ACTCAGGAAAAACTTGTACTTGCAGGGAATAAATTCAAACCAGTTAGGCTGTCTGACTTA
TCTATTCGTCCCTCTTTTGGTGGTCGTGCAAGAAAGCTTCCGGGTACATTGGAAGCTCAT
GTTAATGGTTTCCGGTACTCGACCTCAAGAACAGATGAGCGTGTTGACATCATGTTTGGC
AACATCAAGCATGCATTCTTCCAGCCAGCAGAGAAGGAGATGATTACCCTTCTTCACTTT
CATCTGCATAACCACATAATGGTAGGAAACAAGAAAACCAAGGATGTGCAATTCTATGTT
GAGGTAATGGATGTGGTGCAAACACTTGGAGGTGGAAAGCGGTCTGCCTATGACCCAGAT
GAGATTGAGGAAGAACAGAGAGAAAGAGACCGTAAGAACAAATTCAACATGGACTTCCAG
AATTTTGTGAACCGGGTGAATGATATGTGGAGCCAGCCCCAGCTTAAAGGACTCGACCTG
GAGTTTGATCAACCTCTGAGAGAACTTGGGTTCCATGGGGTGCCCTATAAATCATCAGCA
TTCATCGTGCCAACCTCGAGCTGTTTGGTTGAGCTGATAGAGACCCCATTTCTCGTGATA
ACCTTAAGTGATATTGAGATTGTCAACTTGGAGAGAGTTGGATTTGGGCAGAAGAATTTT
GATATGGCAATTGTCTTCAAGGACTTCAAGCGTGATGTCATGCGCATAGATTCCATCCCT
GTCTCCGCACTTGATGGCATCAAGGAGTGGCTTGACACAACTGACATCAAGTATTATGAG
AGCAAGATGAATCTGAATTGGCGTGAAGTATTGAAGACCATAACTGAAGATCCCCAAAGG
TTTATAGATGAAGGTGGTTGGGAATTTTTAAACATAGATGCTTCTGACTCAGAATCTGAA
AACTCAGAGGAGTCAGACCAAGGTTATGAACCCTCAGACGCTGAACCTGAGTCAGATTCA
GAAGACGAGGCCTCTGATAGTGAATCTCTGGTGGATTCCGAGGAAGAAGGGGAAGACTCA
GATGAAGACTCGGAGGAAGAAAAAGGCAAAACATGGGAAGAGTTGGAGAAGGAGGCAAGC
AATGCAGATAGGGAGAAAGGAGATGAACCTGACAGCGAGGATGAGAGGAGGAGAAAGAAG
AACTTTGGCAAGTCACGATCTGGTCCAAGTTCTGCTGGTTCTAAGCGAATGAAGTTTAGG
TAG