Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064337
CDS Infomation

pacid=37476834 polypeptide=PGSC0003DMP400043380 locus=PGSC0003DMG400024995 ID=PGSC0003DMT400064337.v4.03 annot-version=v4.03
Sequence

ATGGCTGAGGAAAACAAGAAGAATTTTGAGTTTATTGAAGAGGTGACTACCAATGTTGAT
GAAGTCCAAAAGAGAGTTCTTCATGAAATCCTCACTCGAAATGCCAACGTTGAGTACTTG
CAGCGCCTTAGTCATACTGATAGAGAGACGTTCAAGAAATTCGTGCCTGTTATCACCTAT
GAAGATATTCAGCCCGAAATCAATCGTATAGCCAATGGCGATACATCTCCAATCCTATGC
TCCCAGCCCGTATCTGAATTCATTTCAAGTACTGGGACGTCAGGAGGGGAGAACAAATTG
ATACCAACAACAGAGGAAGGGCATGGGAGGAGACTTCAACTTTACGGCCTTGTGTTGTCT
GTGATGAGCCAATTTTTTCCAGATTTGGAGAAGGGCAAAGGAATGTATTTCTTGTTCATA
AAGTCTGAAGCCAAAACCCCCGGAGGATTATTAGCTCGTACTTTTTTAACTAGTCTTTAC
AAGAGTAGTCATATCAGAAACAACAATAGTTATGTGTTGCCCTACACGAGTCCAATTGAA
GCCATTCTCTGCCTAGACTCTTACCAAAGCATGTACTCCCAAATGCTTTGTGGCCTCTGC
CAAAACAGAGAAGTCGTTCGTGTTGGCTCAGTGCTTGCATCTGCCTTCATCCGTGCAATG
CGATTCTTGGAGGATCACTGGTCTCAACTATGTAACGATATCCGAACCGGAACCATTACG
AATAAAATTACTGATCCTTCAGTTCGAGAAGCTGTGATGAAAATCCTCAAACCAGACTCG
GAGTTGGCTGATTTCATCGAGGCTGAATGCAGCAAGGATTCATGGGAAGGGATCGTCACT
AGGCTGTGGCCTAATACCAAGTACATGGACTTAATCGTGACTGGAACCATGTCTCAATAC
ATACCAATGCTCGATTATTACTGCAATAGCCTCCCTCTCGTTAGTACTATGTATGCTTCC
TCCGAATGTTTCTTTGGGATCAACCTGAACCCCCTTTGTAAGCCCAGTGAAGTATCTTAC
ACGCTCATTCCCACCATGGGCTATTTTGAGTTCTTACCGATTCACAGTAGCAATGAATTC
ATCGATTCTATCTCCATTTCTACGCAGCTTAATGAGAAAGACGAACAACAATTGGTCGAT
TTGGTTGATGTCAAGATTGGCCAGGAGTACGAGCTCATTGTTACCACGTATTCTGGACTG
TATAGATACAGGGTGGGTGATGTGCTTCGGGTTGCTGGATACAAGAACAACTCTCCTCAA
TTCAACTTTATACGCCGAGAAAATGTGATCTTGAGCATCGATTTTGATAAAACTAATGAA
TTTGATCTACAAAATGCAGTGAATAATGCAGCAAACAATCTGATGCCATTCGATGCACGT
GTAGTTGACTACACCAGCTATGCGGATACTGCTACCATTCCAGGCCATTATGTCCTGTTT
TGGGAGCTAAGCGCCAACGCCTCTACCCCCATTACTCCTTCAGTCCTTGAAGATTGTTGC
CTCACCATTGAAGAATCTCTCGACAGCGTCTACCGCCAGGGCCGTACATCTGACAAATCC
ATTGGGCCTCTTGAAATCAGGATAGTGGAAACAGGTACTTTTGACAAGCTCATGGACTAT
TGCTGTACTAGCTTATTAGGTGCTTCCATCAACCAATACAAGACGCCAAGGTGCGTTAAA
TTTGCACCGCTCGTCGAGCTATTAAATTCGAGGGTCGTGTCAAGCTACTTCAGTCCCGTG
TGTCCTAAATGGGCTCCTGGAAGTAAGCAATGGAACAACACCAATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400043380
PEP Infomation

pacid=37476834 transcript=PGSC0003DMT400064337 locus=PGSC0003DMG400024995 ID=PGSC0003DMT400064337.v4.03 annot-version=v4.03
Sequence

MAEENKKNFEFIEEVTTNVDEVQKRVLHEILTRNANVEYLQRLSHTDRETFKKFVPVITY
EDIQPEINRIANGDTSPILCSQPVSEFISSTGTSGGENKLIPTTEEGHGRRLQLYGLVLS
VMSQFFPDLEKGKGMYFLFIKSEAKTPGGLLARTFLTSLYKSSHIRNNNSYVLPYTSPIE
AILCLDSYQSMYSQMLCGLCQNREVVRVGSVLASAFIRAMRFLEDHWSQLCNDIRTGTIT
NKITDPSVREAVMKILKPDSELADFIEAECSKDSWEGIVTRLWPNTKYMDLIVTGTMSQY
IPMLDYYCNSLPLVSTMYASSECFFGINLNPLCKPSEVSYTLIPTMGYFEFLPIHSSNEF
IDSISISTQLNEKDEQQLVDLVDVKIGQEYELIVTTYSGLYRYRVGDVLRVAGYKNNSPQ
FNFIRRENVILSIDFDKTNEFDLQNAVNNAANNLMPFDARVVDYTSYADTATIPGHYVLF
WELSANASTPITPSVLEDCCLTIEESLDSVYRQGRTSDKSIGPLEIRIVETGTFDKLMDY
CCTSLLGASINQYKTPRCVKFAPLVELLNSRVVSSYFSPVCPKWAPGSKQWNNTN*

Transcript Sequence

Transcript ID

PGSC0003DMT400064337
Transcript Infomation

pacid=37476834 locus=PGSC0003DMG400024995 ID=PGSC0003DMT400064337.v4.03 annot-version=v4.03
Sequence

ATGGCTGAGGAAAACAAGAAGAATTTTGAGTTTATTGAAGAGGTGACTACCAATGTTGAT
GAAGTCCAAAAGAGAGTTCTTCATGAAATCCTCACTCGAAATGCCAACGTTGAGTACTTG
CAGCGCCTTAGTCATACTGATAGAGAGACGTTCAAGAAATTCGTGCCTGTTATCACCTAT
GAAGATATTCAGCCCGAAATCAATCGTATAGCCAATGGCGATACATCTCCAATCCTATGC
TCCCAGCCCGTATCTGAATTCATTTCAAGTACTGGGACGTCAGGAGGGGAGAACAAATTG
ATACCAACAACAGAGGAAGGGCATGGGAGGAGACTTCAACTTTACGGCCTTGTGTTGTCT
GTGATGAGCCAATTTTTTCCAGATTTGGAGAAGGGCAAAGGAATGTATTTCTTGTTCATA
AAGTCTGAAGCCAAAACCCCCGGAGGATTATTAGCTCGTACTTTTTTAACTAGTCTTTAC
AAGAGTAGTCATATCAGAAACAACAATAGTTATGTGTTGCCCTACACGAGTCCAATTGAA
GCCATTCTCTGCCTAGACTCTTACCAAAGCATGTACTCCCAAATGCTTTGTGGCCTCTGC
CAAAACAGAGAAGTCGTTCGTGTTGGCTCAGTGCTTGCATCTGCCTTCATCCGTGCAATG
CGATTCTTGGAGGATCACTGGTCTCAACTATGTAACGATATCCGAACCGGAACCATTACG
AATAAAATTACTGATCCTTCAGTTCGAGAAGCTGTGATGAAAATCCTCAAACCAGACTCG
GAGTTGGCTGATTTCATCGAGGCTGAATGCAGCAAGGATTCATGGGAAGGGATCGTCACT
AGGCTGTGGCCTAATACCAAGTACATGGACTTAATCGTGACTGGAACCATGTCTCAATAC
ATACCAATGCTCGATTATTACTGCAATAGCCTCCCTCTCGTTAGTACTATGTATGCTTCC
TCCGAATGTTTCTTTGGGATCAACCTGAACCCCCTTTGTAAGCCCAGTGAAGTATCTTAC
ACGCTCATTCCCACCATGGGCTATTTTGAGTTCTTACCGATTCACAGTAGCAATGAATTC
ATCGATTCTATCTCCATTTCTACGCAGCTTAATGAGAAAGACGAACAACAATTGGTCGAT
TTGGTTGATGTCAAGATTGGCCAGGAGTACGAGCTCATTGTTACCACGTATTCTGGACTG
TATAGATACAGGGTGGGTGATGTGCTTCGGGTTGCTGGATACAAGAACAACTCTCCTCAA
TTCAACTTTATACGCCGAGAAAATGTGATCTTGAGCATCGATTTTGATAAAACTAATGAA
TTTGATCTACAAAATGCAGTGAATAATGCAGCAAACAATCTGATGCCATTCGATGCACGT
GTAGTTGACTACACCAGCTATGCGGATACTGCTACCATTCCAGGCCATTATGTCCTGTTT
TGGGAGCTAAGCGCCAACGCCTCTACCCCCATTACTCCTTCAGTCCTTGAAGATTGTTGC
CTCACCATTGAAGAATCTCTCGACAGCGTCTACCGCCAGGGCCGTACATCTGACAAATCC
ATTGGGCCTCTTGAAATCAGGATAGTGGAAACAGGTACTTTTGACAAGCTCATGGACTAT
TGCTGTACTAGCTTATTAGGTGCTTCCATCAACCAATACAAGACGCCAAGGTGCGTTAAA
TTTGCACCGCTCGTCGAGCTATTAAATTCGAGGGTCGTGTCAAGCTACTTCAGTCCCGTG
TGTCCTAAATGGGCTCCTGGAAGTAAGCAATGGAACAACACCAATTGA