Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064308
CDS Infomation

pacid=37424771 polypeptide=PGSC0003DMP400043361 locus=PGSC0003DMG400024985 ID=PGSC0003DMT400064308.v4.03 annot-version=v4.03
Sequence

ATGGAATCTGAATCCACTAGTTCATCTCCACAACTCTCCGCTAAACCTTCTGATGCTGAA
GCTCCCAAGCCAATTGCTTCCCAGAATAATAATTCTGCTCAGAACACATCTAAGACACCT
GCATCAACCATATCATCTTGGGCAAAAACCTTAAACTTTCCGCAGCCTGTAGCACCTGGG
CAGCAGGGGTCAACAGTTGGAGATGCTGGGACATCTTCCTTCTCACGTTTTGCAAGTGGA
CTTGGTTTGTCATTCACTTCAAAAGCTTCTGCGGCAAATGACTGCGCTGGAGGCAACTCA
CCAACCACACAATCAGGTGTATTTGAATCAATCACTAAAGGGCTAATTGACACATCTTTG
AATGCTGTGAAGGCTGTGCAAGTTAAGGCACGACATGCCGTATCTCAAAACAAGCGAAGA
TACCAGGAGGGTGGATTTGATTTGGATATGACTTACATAACCGAGAACATCATAGCTATG
GGTTTCCCTGCAGGCGACATGAGCTCTGGTTTCTTTGGATACGTGGAGGGATTCTATCGG
AATCACATGGAGGAAGTGATCAAATTTTTCGAGACTCATCATCAGGGAAAATACAAAGTT
TACAATCTTTGTTCAGAGAGATTGTATGATGCATCATTATTTGGAGGAAAGGTTGCATCT
TTCCCATTTGATGACCACAATTGCCCGCCAATTCATCTTATTAAACTGTTCTGCCTAAGT
GCATATTCATGGTTGAAGGAGGACATTCTAAATGTGGTAGTTGTACACTGTAAAGCTGGA
ATGGCGAGGACAGGACTTATGATTTGTAGCCTCCTTTTGTTCTTGAAGTTTTTCCCAACA
GCTGAGGAATGCATCAACTATTATAACCAAAAAAGATGCATAGATGGGAAGGCTCTTATT
CTTCCAAGTCAGATTAGGTATGTAAAATATTTCGAGCGCATCTTGACTCAATTTGGTGGT
GAAGCTCCGCCAGGACGTAGGTGCATGCTGAGAGGATTTCGATTCCACAAGTGTTCATCC
TGGATAAGGCCTTCAATTACTATATCTAGCCACAGTGGCATCCTATTCTCAACAAAAAAG
CATCCAAAGACTAAGGACCTTATGCCAGAAGATTTTTGGATACGAACACAAAGAAAAGGA
ATTATGGTTTTTGCTCTACCAGGTGAACCTGGTCTAACTGAGTTGGCAGGCGACTTCAAG
ATCTATTTTCATGATCACCAAGGAGATTTCTATTGCTGGTTGAACACGTCAATGATGGAA
AACAGACTGATTTTAGATGTCTCAGAATTGGATGGCTTTGACAAGAGGAAACTACCATCT
CCAGGATTCAAAGTTGAGATTGTGATGGTGGATTATGATGGAAGTGTTCCAGTAAAGTCC
AAGACTGATGGTGCTTCCAAAGGAAAGGACCTGAGACAAGTAAACATTTCTTCATCGAGT
GAAGGAACCAAAGCTAATTTGAACAAGAACAAGGTGTCCAGGGGCCAAAATCGTGGTGAT
GATGTGTTTTCAGATAGTGAAGGGGAGGACGGTACACCTTCGAGTACAAGAAGTCAGACA
AGAGCTTCACAAACTGCTGCTGCAGGTGTTGATTCTGGCTCCCAAAAGGAGCAGATTGCC
AATCTAACTCATAACACCGAACAACTTTCTCTTAGAAACAGTGATACTAAAAATGGTGCA
AACGAGAACAAGAGTGTAACAGTTGAGAGAGCTGCTATTCCCAATCTCGGTTCAAGTGAT
ATTAAAGCCATTGCAGCAGATGCATCTGTGTTTAGTTTTGGAGATGATGAAGATTATGAA
AGTGAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400043361
PEP Infomation

pacid=37424771 transcript=PGSC0003DMT400064308 locus=PGSC0003DMG400024985 ID=PGSC0003DMT400064308.v4.03 annot-version=v4.03
Sequence

MESESTSSSPQLSAKPSDAEAPKPIASQNNNSAQNTSKTPASTISSWAKTLNFPQPVAPG
QQGSTVGDAGTSSFSRFASGLGLSFTSKASAANDCAGGNSPTTQSGVFESITKGLIDTSL
NAVKAVQVKARHAVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYR
NHMEEVIKFFETHHQGKYKVYNLCSERLYDASLFGGKVASFPFDDHNCPPIHLIKLFCLS
AYSWLKEDILNVVVVHCKAGMARTGLMICSLLLFLKFFPTAEECINYYNQKRCIDGKALI
LPSQIRYVKYFERILTQFGGEAPPGRRCMLRGFRFHKCSSWIRPSITISSHSGILFSTKK
HPKTKDLMPEDFWIRTQRKGIMVFALPGEPGLTELAGDFKIYFHDHQGDFYCWLNTSMME
NRLILDVSELDGFDKRKLPSPGFKVEIVMVDYDGSVPVKSKTDGASKGKDLRQVNISSSS
EGTKANLNKNKVSRGQNRGDDVFSDSEGEDGTPSSTRSQTRASQTAAAGVDSGSQKEQIA
NLTHNTEQLSLRNSDTKNGANENKSVTVERAAIPNLGSSDIKAIAADASVFSFGDDEDYE
SE*

Transcript Sequence

Transcript ID

PGSC0003DMT400064308
Transcript Infomation

pacid=37424771 locus=PGSC0003DMG400024985 ID=PGSC0003DMT400064308.v4.03 annot-version=v4.03
Sequence

ATGGAATCTGAATCCACTAGTTCATCTCCACAACTCTCCGCTAAACCTTCTGATGCTGAA
GCTCCCAAGCCAATTGCTTCCCAGAATAATAATTCTGCTCAGAACACATCTAAGACACCT
GCATCAACCATATCATCTTGGGCAAAAACCTTAAACTTTCCGCAGCCTGTAGCACCTGGG
CAGCAGGGGTCAACAGTTGGAGATGCTGGGACATCTTCCTTCTCACGTTTTGCAAGTGGA
CTTGGTTTGTCATTCACTTCAAAAGCTTCTGCGGCAAATGACTGCGCTGGAGGCAACTCA
CCAACCACACAATCAGGTGTATTTGAATCAATCACTAAAGGGCTAATTGACACATCTTTG
AATGCTGTGAAGGCTGTGCAAGTTAAGGCACGACATGCCGTATCTCAAAACAAGCGAAGA
TACCAGGAGGGTGGATTTGATTTGGATATGACTTACATAACCGAGAACATCATAGCTATG
GGTTTCCCTGCAGGCGACATGAGCTCTGGTTTCTTTGGATACGTGGAGGGATTCTATCGG
AATCACATGGAGGAAGTGATCAAATTTTTCGAGACTCATCATCAGGGAAAATACAAAGTT
TACAATCTTTGTTCAGAGAGATTGTATGATGCATCATTATTTGGAGGAAAGGTTGCATCT
TTCCCATTTGATGACCACAATTGCCCGCCAATTCATCTTATTAAACTGTTCTGCCTAAGT
GCATATTCATGGTTGAAGGAGGACATTCTAAATGTGGTAGTTGTACACTGTAAAGCTGGA
ATGGCGAGGACAGGACTTATGATTTGTAGCCTCCTTTTGTTCTTGAAGTTTTTCCCAACA
GCTGAGGAATGCATCAACTATTATAACCAAAAAAGATGCATAGATGGGAAGGCTCTTATT
CTTCCAAGTCAGATTAGGTATGTAAAATATTTCGAGCGCATCTTGACTCAATTTGGTGGT
GAAGCTCCGCCAGGACGTAGGTGCATGCTGAGAGGATTTCGATTCCACAAGTGTTCATCC
TGGATAAGGCCTTCAATTACTATATCTAGCCACAGTGGCATCCTATTCTCAACAAAAAAG
CATCCAAAGACTAAGGACCTTATGCCAGAAGATTTTTGGATACGAACACAAAGAAAAGGA
ATTATGGTTTTTGCTCTACCAGGTGAACCTGGTCTAACTGAGTTGGCAGGCGACTTCAAG
ATCTATTTTCATGATCACCAAGGAGATTTCTATTGCTGGTTGAACACGTCAATGATGGAA
AACAGACTGATTTTAGATGTCTCAGAATTGGATGGCTTTGACAAGAGGAAACTACCATCT
CCAGGATTCAAAGTTGAGATTGTGATGGTGGATTATGATGGAAGTGTTCCAGTAAAGTCC
AAGACTGATGGTGCTTCCAAAGGAAAGGACCTGAGACAAGTAAACATTTCTTCATCGAGT
GAAGGAACCAAAGCTAATTTGAACAAGAACAAGGTGTCCAGGGGCCAAAATCGTGGTGAT
GATGTGTTTTCAGATAGTGAAGGGGAGGACGGTACACCTTCGAGTACAAGAAGTCAGACA
AGAGCTTCACAAACTGCTGCTGCAGGTGTTGATTCTGGCTCCCAAAAGGAGCAGATTGCC
AATCTAACTCATAACACCGAACAACTTTCTCTTAGAAACAGTGATACTAAAAATGGTGCA
AACGAGAACAAGAGTGTAACAGTTGAGAGAGCTGCTATTCCCAATCTCGGTTCAAGTGAT
ATTAAAGCCATTGCAGCAGATGCATCTGTGTTTAGTTTTGGAGATGATGAAGATTATGAA
AGTGAATAA