Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064290
CDS Infomation

pacid=37425628 polypeptide=PGSC0003DMP400043351 locus=PGSC0003DMG400024978 ID=PGSC0003DMT400064290.v4.03 annot-version=v4.03
Sequence

ATGGCTATTGTTTCTGGTCTTTCATCTCCTCTTGGTCCTCCGGCATGTGAAAAAGATGCC
AAGGTCCTTCAGTTTATAGATGACATGACTAAAAATATTGATCCAGAACAAGTGAGAGTA
TTGGCTGAAATACTAACCCGAAATGCCAATACTGAGTACCTCCAGAGATTCAACATTAGT
GGTGCTATTGACCGTGAAACTTTCAAGTCTAAGGTCCCCGTTGTCACATACGAGGATCTT
AAACCTGATATTGATCGTATTGCTAATGGTGATCGTTCTCCAATTTTCTCATCTCACCCT
ATCTCCGAATTCCTTACCAGTTCGGGGACGTCTGCCGGAGAGAGAAAACTGATGCCCACA
GTTGCGGATGAGCTAGAACGCAGACAGAAACTGTACAACCTTCTACAGCCCGTGATGAAT
CTGTATGTGCCTGGTCTAGACAAGGGGAAGGGATTGTACTTTCTGTTTATCAAGGCAGAA
ACCAAGACGCCTAGTGGCCTTGTTGCACGTCCAGTCCTAACAAGTTACTACAAAAGTGAA
CAATTCAAGACAAGGCCATACGATCCATACAATGTGTATACAAGCCCCAACGAGACCATT
CTCTGTGTCGATTCTTTCCAAAGCATGTATTCCCAAATGCTTTGTGGCCTTCTCATGAGA
GAAGAAGTCCTCCGAGTTGGCGCTGTTTTTGCCTCTGGCTTACTCCGTGCCATCCGTTTT
CTTCAACTCAATTGGAAACAATTGTCTCAGGATATCGCGTCTGGAACTCTAAACCCTAGA
GTTTCAGACCCGTCTATCCGAAATTGCATTTCCGAAATACTCAAACCAAATCCCCAGCTT
GCTGAGTTTGTTTCTAAGGAATGTGAAGGCGAAAATTGGGAAGGAATCATTACTAGAATT
TGGCCAAACACAAAGTACCTTGATGTGATAGTCACAGGTGCAATGGCTCAATATATCCCT
ACTTTAGATTATTATAGTGGGGGTCTACCAAAGGTGTGTACAATGTATGCATCATCCGAA
TGTTATTTTGGACTCAATTTAAATCCAATGTGTAAGCCTTCTGAAGTTTGTTACACCATC
ATGCCAAATATGGGTTACTTTGAATTCATCCCTCATGACTCGGTCAACCCGGTTCAAATC
TCTCGTGACTCACCCCCACATCTAGTAGACCTTGCTGACGTGGAAATCGGAAAAGAATAC
GAGCTCGTGATCACAACTTACGCCGGACTATGCCGTTACCGAGTTGGTGACATACTCCAG
GTCACCGGGTTCCACAACTTGGCCCCTCAGTTCAAATTCGTAAGGCGAAAAAACGTGCTG
TTGAGTATTGATTCTGATAAAACCGATGAGTCCGAATTACAGACCGCGATTGAAAATGCG
ACCGCACTTTTGCGCCCGTATGATACTACTTTGGTTGAGTACACGAGTTTTGCGGATACT
AAAACAATTCCGGGGCATTACGTTATTTACTGGGAGTTACTTGTTAAGGACCCGTCTAAC
CCGCCGAGTGATGACGTGTTGAGCCAGTGCTGCCTTGCGATGGAAGAATCGTTGAACTCG
GTGTACAGGCAGTGTCGCGTCGCGGATAATTCAATCGGGCCACTGGAGATTAGAGTTGTG
AAAAACGGAACATTTGAAGAACTTATGGATTATGCAATTTCGAGAGGTGCATCGATTAAT
CAGTATAAGGCACCAAGGTGTGTTAATTTTACTCCTATTGTGGAACTTTTGGACTCCAGG
GTGATTTCTGTGAATTTTAGTCCAAAAACTCCTCACTGGACCCCAGAACGACGACGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400043351
PEP Infomation

pacid=37425628 transcript=PGSC0003DMT400064290 locus=PGSC0003DMG400024978 ID=PGSC0003DMT400064290.v4.03 annot-version=v4.03
Sequence

MAIVSGLSSPLGPPACEKDAKVLQFIDDMTKNIDPEQVRVLAEILTRNANTEYLQRFNIS
GAIDRETFKSKVPVVTYEDLKPDIDRIANGDRSPIFSSHPISEFLTSSGTSAGERKLMPT
VADELERRQKLYNLLQPVMNLYVPGLDKGKGLYFLFIKAETKTPSGLVARPVLTSYYKSE
QFKTRPYDPYNVYTSPNETILCVDSFQSMYSQMLCGLLMREEVLRVGAVFASGLLRAIRF
LQLNWKQLSQDIASGTLNPRVSDPSIRNCISEILKPNPQLAEFVSKECEGENWEGIITRI
WPNTKYLDVIVTGAMAQYIPTLDYYSGGLPKVCTMYASSECYFGLNLNPMCKPSEVCYTI
MPNMGYFEFIPHDSVNPVQISRDSPPHLVDLADVEIGKEYELVITTYAGLCRYRVGDILQ
VTGFHNLAPQFKFVRRKNVLLSIDSDKTDESELQTAIENATALLRPYDTTLVEYTSFADT
KTIPGHYVIYWELLVKDPSNPPSDDVLSQCCLAMEESLNSVYRQCRVADNSIGPLEIRVV
KNGTFEELMDYAISRGASINQYKAPRCVNFTPIVELLDSRVISVNFSPKTPHWTPERRR*

Transcript Sequence

Transcript ID

PGSC0003DMT400064290
Transcript Infomation

pacid=37425628 locus=PGSC0003DMG400024978 ID=PGSC0003DMT400064290.v4.03 annot-version=v4.03
Sequence

ATGGCTATTGTTTCTGGTCTTTCATCTCCTCTTGGTCCTCCGGCATGTGAAAAAGATGCC
AAGGTCCTTCAGTTTATAGATGACATGACTAAAAATATTGATCCAGAACAAGTGAGAGTA
TTGGCTGAAATACTAACCCGAAATGCCAATACTGAGTACCTCCAGAGATTCAACATTAGT
GGTGCTATTGACCGTGAAACTTTCAAGTCTAAGGTCCCCGTTGTCACATACGAGGATCTT
AAACCTGATATTGATCGTATTGCTAATGGTGATCGTTCTCCAATTTTCTCATCTCACCCT
ATCTCCGAATTCCTTACCAGTTCGGGGACGTCTGCCGGAGAGAGAAAACTGATGCCCACA
GTTGCGGATGAGCTAGAACGCAGACAGAAACTGTACAACCTTCTACAGCCCGTGATGAAT
CTGTATGTGCCTGGTCTAGACAAGGGGAAGGGATTGTACTTTCTGTTTATCAAGGCAGAA
ACCAAGACGCCTAGTGGCCTTGTTGCACGTCCAGTCCTAACAAGTTACTACAAAAGTGAA
CAATTCAAGACAAGGCCATACGATCCATACAATGTGTATACAAGCCCCAACGAGACCATT
CTCTGTGTCGATTCTTTCCAAAGCATGTATTCCCAAATGCTTTGTGGCCTTCTCATGAGA
GAAGAAGTCCTCCGAGTTGGCGCTGTTTTTGCCTCTGGCTTACTCCGTGCCATCCGTTTT
CTTCAACTCAATTGGAAACAATTGTCTCAGGATATCGCGTCTGGAACTCTAAACCCTAGA
GTTTCAGACCCGTCTATCCGAAATTGCATTTCCGAAATACTCAAACCAAATCCCCAGCTT
GCTGAGTTTGTTTCTAAGGAATGTGAAGGCGAAAATTGGGAAGGAATCATTACTAGAATT
TGGCCAAACACAAAGTACCTTGATGTGATAGTCACAGGTGCAATGGCTCAATATATCCCT
ACTTTAGATTATTATAGTGGGGGTCTACCAAAGGTGTGTACAATGTATGCATCATCCGAA
TGTTATTTTGGACTCAATTTAAATCCAATGTGTAAGCCTTCTGAAGTTTGTTACACCATC
ATGCCAAATATGGGTTACTTTGAATTCATCCCTCATGACTCGGTCAACCCGGTTCAAATC
TCTCGTGACTCACCCCCACATCTAGTAGACCTTGCTGACGTGGAAATCGGAAAAGAATAC
GAGCTCGTGATCACAACTTACGCCGGACTATGCCGTTACCGAGTTGGTGACATACTCCAG
GTCACCGGGTTCCACAACTTGGCCCCTCAGTTCAAATTCGTAAGGCGAAAAAACGTGCTG
TTGAGTATTGATTCTGATAAAACCGATGAGTCCGAATTACAGACCGCGATTGAAAATGCG
ACCGCACTTTTGCGCCCGTATGATACTACTTTGGTTGAGTACACGAGTTTTGCGGATACT
AAAACAATTCCGGGGCATTACGTTATTTACTGGGAGTTACTTGTTAAGGACCCGTCTAAC
CCGCCGAGTGATGACGTGTTGAGCCAGTGCTGCCTTGCGATGGAAGAATCGTTGAACTCG
GTGTACAGGCAGTGTCGCGTCGCGGATAATTCAATCGGGCCACTGGAGATTAGAGTTGTG
AAAAACGGAACATTTGAAGAACTTATGGATTATGCAATTTCGAGAGGTGCATCGATTAAT
CAGTATAAGGCACCAAGGTGTGTTAATTTTACTCCTATTGTGGAACTTTTGGACTCCAGG
GTGATTTCTGTGAATTTTAGTCCAAAAACTCCTCACTGGACCCCAGAACGACGACGTTGA