Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064235
CDS Infomation

pacid=37426768 polypeptide=PGSC0003DMP400043303 locus=PGSC0003DMG400024954 ID=PGSC0003DMT400064235.v4.03 annot-version=v4.03
Sequence

ATGAAATTCCAAACCTTTGATCTTGTTCTTCTTCTTTTTCTACTACTTGAATATCAAGCT
TCTGGGCTTAACAATGATGGACTTCTGTTACTGACATTCAAGTACAATATTCTGAGTGAC
CCTTTAAGTGTTCTGCAGAACTGGAATTCTTGGGATGATACACCATGTTCATGGAAAGGG
GTAGGTTGTGGAAATCCAAATGCTTCAGACCCAAACCTTCGAGTGACAAATTTGTCTCTT
CCTAATTCTCTGCTTCTTGGTTCTATTCCTTCTAGTCTTGGTATGATTCAATATCTTACA
AATCTTGATCTTTCTAATAATTCCATTAATGGCTCTATTCCTCTTACTCTCTTTAGTGCC
CCTGAGCTTCAACGCCTTGATTTTTCTAACAACAGAATATCCGGCCAGTTGCCTGAGCTT
GTCGGACATTTAAATAATCTTCAGTTTCTTAACCTCTCCGGTAATGCTTTGACGGGAAGA
TTACCGGCAAATCTTGGTAATCTAACTGTTGTTTCTTTGAAAGATAATTATTTTTTTGGT
GCTGTTCCTTTTGGGTTTGATTCAGTTCAAGTTTTAGATCTGTCTTCAAATTTGATTAAT
GGGTCATTGCCTCCTAATTTTGGGGGCAGTAATCTCCGTTACTTTAATGCTTCTTTTAAT
AAACTTTCTGGAGATATCCCACCGGAATTTGGCAGCAAAATCCCTCCAAATGCAACTATA
GATCTCTCTTACAACAATTTCAGCGGTGCAATTCCAGAGTCAATTGTTTTTATCAACCAA
AATAGAAAAGCTTTTTCTGGTAATCCAGAATTATGTGGTGCGCCGCTGAAAAATTTATGC
CCAATTCCGTCAACAGTAACAACTCTGCCAAATTCCCCTGAACCAACTTCTTCCCCAGCA
ATTGCAGCCATTCCGAAACCCACAGACTCAAACCCAGCCGCCGAATCTCCAAAAGAGGGC
AAAAATGGGTTGAGAACTGGCACAATTATAGGCATAATAGCAGGGGATATTGCAGCAGTA
GGAGTTTTAGCACTGATTTTCATGTACGTATACCGAGCCAAAAAGAAGAAAAGGAACATA
GAAAATAGCATTAAAAAAGAAGCTGAAACTGCAAAAGATTTTGACTGGGCATCGTCAGCA
TCATCAGAAGAATACAACTGGTTAAGGTCATGGACTTGCTTGAAAAAACAAAGGCACGGA
GATGACGACGAATTATCAGAAGCTTCCCATTCAGAAAGTGAAAATTCCCAATTGGGTCAT
CCTCAGCAGAATCACGTGCATACAGAGCAGAAAACAGGTGAATTAGTAACGGTTGATGGA
GAAAGGGAACTCGAATTAGAAACACTACTAAAAGCATCTGCATACATTTTGGGAGCTAGT
GGGTCGAGTATAATGTACAAGGCTGTGCTAGAAGACGGTACTACACTGGCGGTGCGACGA
ATTGGTGAAAGTGGTGTGGAACGGTTCAAAGATTTCGAGAATCAAGTAAAGGTAATTGCT
AAATTGGTGCACACAAATTTGGTTAAAATCCGTGGCTTCTATTGGGGCGCTGAAGAGAAA
TTGGTCATCTACGATTTCGTTCCTAATGGTAGCCTTGCCAATGCACGTAACAGAAAGGCT
GGTTCTTCGCCATGTCACGTACCCTGGGAAATCCGGCTGAAGGTTGCTAAAGGTGTGGCT
CGTGGGCTCACTTACATTCATGAAAAGAAGCATGTCCACGGCAACTTGAAGCCCAGTAAC
ATTTTACTAGGGGAAGATATGGAGCCCAAGATTGGTGATTTTGGAATTGAAAGGCTTGTA
ACAGGAGACAGTAGTCATAAGACCTATGGATCTGCCCGTAATTTTGGAAGCAAAAGGTCC
ACAGCATCCCGTGAGAGCTTCCAGGACTTTACATCTGGGCCTACTCCAACCCCAAGTCCA
AGTGCATTGGGCATATCTCCTTACCATGCACCCGAATCGCTTCGTAGCCTCAAGCCCAAC
CCGAAATGGGATGTATTCTCATTCGGGGTAGTCTTGCTGGAGTTGCTAACTGGAAAGGTG
ATTGTCTCGGATGAAATGGGACCCGCATCGGTCATCGGTGCTACCACATCAGCAGAGGAA
GAGAAGAGTAAAGTGTTACGGTTGGCTGATGTGGCGATACGTGCTGATGTGGAAGGGAAA
GAAGATGCTTTGTTGGCACTAATGAAAGTAGGATATAGTTGTATATCACCAACACCTCAG
AAGAGACCAGGCATGAGAGAGGTTGTTCAAGCATTGGAAAAATTTCCAACTAATTCAACC
AGTTCACCATACTATTATGGACCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400043303
PEP Infomation

pacid=37426768 transcript=PGSC0003DMT400064235 locus=PGSC0003DMG400024954 ID=PGSC0003DMT400064235.v4.03 annot-version=v4.03
Sequence

MKFQTFDLVLLLFLLLEYQASGLNNDGLLLLTFKYNILSDPLSVLQNWNSWDDTPCSWKG
VGCGNPNASDPNLRVTNLSLPNSLLLGSIPSSLGMIQYLTNLDLSNNSINGSIPLTLFSA
PELQRLDFSNNRISGQLPELVGHLNNLQFLNLSGNALTGRLPANLGNLTVVSLKDNYFFG
AVPFGFDSVQVLDLSSNLINGSLPPNFGGSNLRYFNASFNKLSGDIPPEFGSKIPPNATI
DLSYNNFSGAIPESIVFINQNRKAFSGNPELCGAPLKNLCPIPSTVTTLPNSPEPTSSPA
IAAIPKPTDSNPAAESPKEGKNGLRTGTIIGIIAGDIAAVGVLALIFMYVYRAKKKKRNI
ENSIKKEAETAKDFDWASSASSEEYNWLRSWTCLKKQRHGDDDELSEASHSESENSQLGH
PQQNHVHTEQKTGELVTVDGERELELETLLKASAYILGASGSSIMYKAVLEDGTTLAVRR
IGESGVERFKDFENQVKVIAKLVHTNLVKIRGFYWGAEEKLVIYDFVPNGSLANARNRKA
GSSPCHVPWEIRLKVAKGVARGLTYIHEKKHVHGNLKPSNILLGEDMEPKIGDFGIERLV
TGDSSHKTYGSARNFGSKRSTASRESFQDFTSGPTPTPSPSALGISPYHAPESLRSLKPN
PKWDVFSFGVVLLELLTGKVIVSDEMGPASVIGATTSAEEEKSKVLRLADVAIRADVEGK
EDALLALMKVGYSCISPTPQKRPGMREVVQALEKFPTNSTSSPYYYGP*

Transcript Sequence

Transcript ID

PGSC0003DMT400064235
Transcript Infomation

pacid=37426768 locus=PGSC0003DMG400024954 ID=PGSC0003DMT400064235.v4.03 annot-version=v4.03
Sequence

ATGAAATTCCAAACCTTTGATCTTGTTCTTCTTCTTTTTCTACTACTTGAATATCAAGCT
TCTGGGCTTAACAATGATGGACTTCTGTTACTGACATTCAAGTACAATATTCTGAGTGAC
CCTTTAAGTGTTCTGCAGAACTGGAATTCTTGGGATGATACACCATGTTCATGGAAAGGG
GTAGGTTGTGGAAATCCAAATGCTTCAGACCCAAACCTTCGAGTGACAAATTTGTCTCTT
CCTAATTCTCTGCTTCTTGGTTCTATTCCTTCTAGTCTTGGTATGATTCAATATCTTACA
AATCTTGATCTTTCTAATAATTCCATTAATGGCTCTATTCCTCTTACTCTCTTTAGTGCC
CCTGAGCTTCAACGCCTTGATTTTTCTAACAACAGAATATCCGGCCAGTTGCCTGAGCTT
GTCGGACATTTAAATAATCTTCAGTTTCTTAACCTCTCCGGTAATGCTTTGACGGGAAGA
TTACCGGCAAATCTTGGTAATCTAACTGTTGTTTCTTTGAAAGATAATTATTTTTTTGGT
GCTGTTCCTTTTGGGTTTGATTCAGTTCAAGTTTTAGATCTGTCTTCAAATTTGATTAAT
GGGTCATTGCCTCCTAATTTTGGGGGCAGTAATCTCCGTTACTTTAATGCTTCTTTTAAT
AAACTTTCTGGAGATATCCCACCGGAATTTGGCAGCAAAATCCCTCCAAATGCAACTATA
GATCTCTCTTACAACAATTTCAGCGGTGCAATTCCAGAGTCAATTGTTTTTATCAACCAA
AATAGAAAAGCTTTTTCTGGTAATCCAGAATTATGTGGTGCGCCGCTGAAAAATTTATGC
CCAATTCCGTCAACAGTAACAACTCTGCCAAATTCCCCTGAACCAACTTCTTCCCCAGCA
ATTGCAGCCATTCCGAAACCCACAGACTCAAACCCAGCCGCCGAATCTCCAAAAGAGGGC
AAAAATGGGTTGAGAACTGGCACAATTATAGGCATAATAGCAGGGGATATTGCAGCAGTA
GGAGTTTTAGCACTGATTTTCATGTACGTATACCGAGCCAAAAAGAAGAAAAGGAACATA
GAAAATAGCATTAAAAAAGAAGCTGAAACTGCAAAAGATTTTGACTGGGCATCGTCAGCA
TCATCAGAAGAATACAACTGGTTAAGGTCATGGACTTGCTTGAAAAAACAAAGGCACGGA
GATGACGACGAATTATCAGAAGCTTCCCATTCAGAAAGTGAAAATTCCCAATTGGGTCAT
CCTCAGCAGAATCACGTGCATACAGAGCAGAAAACAGGTGAATTAGTAACGGTTGATGGA
GAAAGGGAACTCGAATTAGAAACACTACTAAAAGCATCTGCATACATTTTGGGAGCTAGT
GGGTCGAGTATAATGTACAAGGCTGTGCTAGAAGACGGTACTACACTGGCGGTGCGACGA
ATTGGTGAAAGTGGTGTGGAACGGTTCAAAGATTTCGAGAATCAAGTAAAGGTAATTGCT
AAATTGGTGCACACAAATTTGGTTAAAATCCGTGGCTTCTATTGGGGCGCTGAAGAGAAA
TTGGTCATCTACGATTTCGTTCCTAATGGTAGCCTTGCCAATGCACGTAACAGAAAGGCT
GGTTCTTCGCCATGTCACGTACCCTGGGAAATCCGGCTGAAGGTTGCTAAAGGTGTGGCT
CGTGGGCTCACTTACATTCATGAAAAGAAGCATGTCCACGGCAACTTGAAGCCCAGTAAC
ATTTTACTAGGGGAAGATATGGAGCCCAAGATTGGTGATTTTGGAATTGAAAGGCTTGTA
ACAGGAGACAGTAGTCATAAGACCTATGGATCTGCCCGTAATTTTGGAAGCAAAAGGTCC
ACAGCATCCCGTGAGAGCTTCCAGGACTTTACATCTGGGCCTACTCCAACCCCAAGTCCA
AGTGCATTGGGCATATCTCCTTACCATGCACCCGAATCGCTTCGTAGCCTCAAGCCCAAC
CCGAAATGGGATGTATTCTCATTCGGGGTAGTCTTGCTGGAGTTGCTAACTGGAAAGGTG
ATTGTCTCGGATGAAATGGGACCCGCATCGGTCATCGGTGCTACCACATCAGCAGAGGAA
GAGAAGAGTAAAGTGTTACGGTTGGCTGATGTGGCGATACGTGCTGATGTGGAAGGGAAA
GAAGATGCTTTGTTGGCACTAATGAAAGTAGGATATAGTTGTATATCACCAACACCTCAG
AAGAGACCAGGCATGAGAGAGGTTGTTCAAGCATTGGAAAAATTTCCAACTAATTCAACC
AGTTCACCATACTATTATGGACCTTAA