Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064232
CDS Infomation

pacid=37427934 polypeptide=PGSC0003DMP400043301 locus=PGSC0003DMG400024953 ID=PGSC0003DMT400064232.v4.03 annot-version=v4.03
Sequence

ATGGAAGCTCTGCGTCTTTCAACTTCCTTCGCAGGGATCAATTGTTCAATCTACAAATCT
ACAAGGAGACTCAAAGTCAACCGGAATCTCTTGCTCTCTTCATTGAAACCCAAATCTTCA
GTTCCCATTCGGAGCTCCGCTCAGTTCCGTGGACGCATCCACTGTTCTGCTTGCAGCTGT
TCCTCTCACAGTCACCATCATCATCACCATGACCATAGTCATGATCATCACAATCATCAT
CACCACCACCATGGTCCTGACGAAGGCGACGGGAAGCTCACGAAATTTCAGGAGGTATTT
CTCAAGTTTGCAAATGCTATCAGGTGGACCCAGTTGGCGAATTACTTGAGAGAGAATTTA
GAGCTTTGCTGTTGCTCAGCGGTTTTGTTTATTGCTGCTGCTGTTTGCCCTTACTTTCTT
CCCAAGCCCGCTGTACTGCCTCTCCAGCGTATTTTCGCTCTCATTGCCTTTCCTCTCGTT
GGGGTCTCAGCATCACTTGATGCATTAGTGGACATTACTGGTGGTAAAATCAATATTCAT
GTACTGATGGCTCTCGCAGCTTTTGCATCAGTTTTTATGGGGAACGTATTGGAAGGTGGC
TTGCTTCTTGCAATGTTCAATTTAGCTCATATAGCTGAAGAGTATTTCACGAGTCGCTCC
AAGGGTGATGTAAAGGAATTAAAAGAAAACCATCCAGAATTTGCTCTTGTGCTGCACGTA
GACAATCAAACTTTGCCTAGTTTCACTGACTTGTCATATATTGAAGTTCCTGTGAGTGAC
CTGGAAGTTGGCTCATTTATATTGGTTAAAGCTGGTGAGTCAGTACCAGTGGACTGTGAA
GTTTCCCGAGGTAGATCAACAATTACTATTGAACATTTGACGGGAGAAGTCAAACCTTTA
GATAAGAAAGAAGGGGACAATATTCCAGGAGGTGCGCGAAACCTGGACGGTATGTTGATA
GTGAAGGCAAAGAAGACATGGAAAGAGTCCATGCTTAGCAGAATTGTGCAGCTGACAGAA
GAGGCTCAGCTAAGTAAACCAAGACTCCAAAGATGGCTTGATAAGTTTGGCGAGCAGTAC
AGTAAAGCAGTTGTGTTATTATCTCTAGCAGTTGCTTTTCTTGGTCCATTCCTTTTCAAA
TGGCCTTTCTTTAGTACTACAGCTTGCAGAGGATCAATTTACCGAGCATTGGGCCTCATG
GTAGCTGCATCACCTTGTGCATTAGCTGTGGCGCCATTGGCTTACGCAACTGCCATCAGT
GCTTGTGCAAAAAGGGGCATATTGCTTAAAGGTGGACAGGTGCTTGATGCCTTGGCTTCA
TGCCATAGTATTGCATTTGACAAAACTGGTACATTGACAACAGGGGAGTTCATGTGCAAA
GCAATTGAACCGATACATGGACATGCTAAGAGTGTTGGAAAAGGATTTGCTTCTTGTTGT
AACCCCAGTTGTGAGAAAGAAGCACTTGCTGTTGCAGCTGCAATGGAGAGGGGTACAACT
CACCCAATTGGAAGAGCTGTCGTAGATCATAGCGCAGGCAAAGACCTTCCTTCAATTTCA
GTTGAAAGTTTTGAGAATTTACCTGGTAGAGGCATAATTGCAACATTATCGAGCTTTGAG
CCACGACTAGGAGGTGGTAAACCATGGAAAGCTTTTCTTGGTTCTGTGGAATACATCACC
TCACTTTGCGACTCTGAAGATGAATCAAGAAGAGTTGAGGAGGCAGTAAACACGTCATCT
CATGGAGTTGATTTTGTCCGTGCTGCTCTCTCGGTTAATAATCAAAAGGTAACTCTTTTT
CACTTTGAGGATAAACCTCGACCTGGAGTTCTAGACGTCGTACAGACATTGCAGAATCAA
GCTAAACTTCGTGTCATAATGTTAACTGGTGACCATGAGGCAAGTGCAAGGAGAGTTGCT
AAAACAGTGGGCATCAAAGAAGTTAACTGCAGCCTAAAGCCAGAGGATAAACTTTATCAT
GTTACAAGCATCTCAAGGGATACAGGAGGCCTTATAATGGTAGGTGACGGCATCAATGAT
GCCCCAGCACTTGCTGCAGCTACTGTTGGTATTGTACTGGCTGAGCGAGCTAGTGCCGCT
GCCATAGCTGTTGCTGATGTACTGTTGTTGCAAGACAATATTTCTGGTGTCCCATTTTGT
GTTGCAAAATCTCGCCAAACAACATCCTTGATCAAGCAAAATGTAGTACTAGCTTTGTGT
AGCATTATTTTGGCATCTCTTACATCAGTTATGGGGTTCCTACCACTCTGGTTGACGGTG
CTCTTGCATGAAGGTGGCACACTTCTTGTTTGTCTCAATTCCGTACGTGCGCTAAACCCT
CCAACATGGTCATGGAGGGAGGATATTTCACAAATCATTGATAGAATGCGTTCTCTAGTT
ATGTTTTTGAGGCATGGCACACTACCTAGCACCATTCAGGCAGCTCATTTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400043301
PEP Infomation

pacid=37427934 transcript=PGSC0003DMT400064232 locus=PGSC0003DMG400024953 ID=PGSC0003DMT400064232.v4.03 annot-version=v4.03
Sequence

MEALRLSTSFAGINCSIYKSTRRLKVNRNLLLSSLKPKSSVPIRSSAQFRGRIHCSACSC
SSHSHHHHHHDHSHDHHNHHHHHHGPDEGDGKLTKFQEVFLKFANAIRWTQLANYLRENL
ELCCCSAVLFIAAAVCPYFLPKPAVLPLQRIFALIAFPLVGVSASLDALVDITGGKINIH
VLMALAAFASVFMGNVLEGGLLLAMFNLAHIAEEYFTSRSKGDVKELKENHPEFALVLHV
DNQTLPSFTDLSYIEVPVSDLEVGSFILVKAGESVPVDCEVSRGRSTITIEHLTGEVKPL
DKKEGDNIPGGARNLDGMLIVKAKKTWKESMLSRIVQLTEEAQLSKPRLQRWLDKFGEQY
SKAVVLLSLAVAFLGPFLFKWPFFSTTACRGSIYRALGLMVAASPCALAVAPLAYATAIS
ACAKRGILLKGGQVLDALASCHSIAFDKTGTLTTGEFMCKAIEPIHGHAKSVGKGFASCC
NPSCEKEALAVAAAMERGTTHPIGRAVVDHSAGKDLPSISVESFENLPGRGIIATLSSFE
PRLGGGKPWKAFLGSVEYITSLCDSEDESRRVEEAVNTSSHGVDFVRAALSVNNQKVTLF
HFEDKPRPGVLDVVQTLQNQAKLRVIMLTGDHEASARRVAKTVGIKEVNCSLKPEDKLYH
VTSISRDTGGLIMVGDGINDAPALAAATVGIVLAERASAAAIAVADVLLLQDNISGVPFC
VAKSRQTTSLIKQNVVLALCSIILASLTSVMGFLPLWLTVLLHEGGTLLVCLNSVRALNP
PTWSWREDISQIIDRMRSLVMFLRHGTLPSTIQAAHL*

Transcript Sequence

Transcript ID

PGSC0003DMT400064232
Transcript Infomation

pacid=37427934 locus=PGSC0003DMG400024953 ID=PGSC0003DMT400064232.v4.03 annot-version=v4.03
Sequence

ATGGAAGCTCTGCGTCTTTCAACTTCCTTCGCAGGGATCAATTGTTCAATCTACAAATCT
ACAAGGAGACTCAAAGTCAACCGGAATCTCTTGCTCTCTTCATTGAAACCCAAATCTTCA
GTTCCCATTCGGAGCTCCGCTCAGTTCCGTGGACGCATCCACTGTTCTGCTTGCAGCTGT
TCCTCTCACAGTCACCATCATCATCACCATGACCATAGTCATGATCATCACAATCATCAT
CACCACCACCATGGTCCTGACGAAGGCGACGGGAAGCTCACGAAATTTCAGGAGGTATTT
CTCAAGTTTGCAAATGCTATCAGGTGGACCCAGTTGGCGAATTACTTGAGAGAGAATTTA
GAGCTTTGCTGTTGCTCAGCGGTTTTGTTTATTGCTGCTGCTGTTTGCCCTTACTTTCTT
CCCAAGCCCGCTGTACTGCCTCTCCAGCGTATTTTCGCTCTCATTGCCTTTCCTCTCGTT
GGGGTCTCAGCATCACTTGATGCATTAGTGGACATTACTGGTGGTAAAATCAATATTCAT
GTACTGATGGCTCTCGCAGCTTTTGCATCAGTTTTTATGGGGAACGTATTGGAAGGTGGC
TTGCTTCTTGCAATGTTCAATTTAGCTCATATAGCTGAAGAGTATTTCACGAGTCGCTCC
AAGGGTGATGTAAAGGAATTAAAAGAAAACCATCCAGAATTTGCTCTTGTGCTGCACGTA
GACAATCAAACTTTGCCTAGTTTCACTGACTTGTCATATATTGAAGTTCCTGTGAGTGAC
CTGGAAGTTGGCTCATTTATATTGGTTAAAGCTGGTGAGTCAGTACCAGTGGACTGTGAA
GTTTCCCGAGGTAGATCAACAATTACTATTGAACATTTGACGGGAGAAGTCAAACCTTTA
GATAAGAAAGAAGGGGACAATATTCCAGGAGGTGCGCGAAACCTGGACGGTATGTTGATA
GTGAAGGCAAAGAAGACATGGAAAGAGTCCATGCTTAGCAGAATTGTGCAGCTGACAGAA
GAGGCTCAGCTAAGTAAACCAAGACTCCAAAGATGGCTTGATAAGTTTGGCGAGCAGTAC
AGTAAAGCAGTTGTGTTATTATCTCTAGCAGTTGCTTTTCTTGGTCCATTCCTTTTCAAA
TGGCCTTTCTTTAGTACTACAGCTTGCAGAGGATCAATTTACCGAGCATTGGGCCTCATG
GTAGCTGCATCACCTTGTGCATTAGCTGTGGCGCCATTGGCTTACGCAACTGCCATCAGT
GCTTGTGCAAAAAGGGGCATATTGCTTAAAGGTGGACAGGTGCTTGATGCCTTGGCTTCA
TGCCATAGTATTGCATTTGACAAAACTGGTACATTGACAACAGGGGAGTTCATGTGCAAA
GCAATTGAACCGATACATGGACATGCTAAGAGTGTTGGAAAAGGATTTGCTTCTTGTTGT
AACCCCAGTTGTGAGAAAGAAGCACTTGCTGTTGCAGCTGCAATGGAGAGGGGTACAACT
CACCCAATTGGAAGAGCTGTCGTAGATCATAGCGCAGGCAAAGACCTTCCTTCAATTTCA
GTTGAAAGTTTTGAGAATTTACCTGGTAGAGGCATAATTGCAACATTATCGAGCTTTGAG
CCACGACTAGGAGGTGGTAAACCATGGAAAGCTTTTCTTGGTTCTGTGGAATACATCACC
TCACTTTGCGACTCTGAAGATGAATCAAGAAGAGTTGAGGAGGCAGTAAACACGTCATCT
CATGGAGTTGATTTTGTCCGTGCTGCTCTCTCGGTTAATAATCAAAAGGTAACTCTTTTT
CACTTTGAGGATAAACCTCGACCTGGAGTTCTAGACGTCGTACAGACATTGCAGAATCAA
GCTAAACTTCGTGTCATAATGTTAACTGGTGACCATGAGGCAAGTGCAAGGAGAGTTGCT
AAAACAGTGGGCATCAAAGAAGTTAACTGCAGCCTAAAGCCAGAGGATAAACTTTATCAT
GTTACAAGCATCTCAAGGGATACAGGAGGCCTTATAATGGTAGGTGACGGCATCAATGAT
GCCCCAGCACTTGCTGCAGCTACTGTTGGTATTGTACTGGCTGAGCGAGCTAGTGCCGCT
GCCATAGCTGTTGCTGATGTACTGTTGTTGCAAGACAATATTTCTGGTGTCCCATTTTGT
GTTGCAAAATCTCGCCAAACAACATCCTTGATCAAGCAAAATGTAGTACTAGCTTTGTGT
AGCATTATTTTGGCATCTCTTACATCAGTTATGGGGTTCCTACCACTCTGGTTGACGGTG
CTCTTGCATGAAGGTGGCACACTTCTTGTTTGTCTCAATTCCGTACGTGCGCTAAACCCT
CCAACATGGTCATGGAGGGAGGATATTTCACAAATCATTGATAGAATGCGTTCTCTAGTT
ATGTTTTTGAGGCATGGCACACTACCTAGCACCATTCAGGCAGCTCATTTGTGA