Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064218
CDS Infomation

pacid=37427209 polypeptide=PGSC0003DMP400043287 locus=PGSC0003DMG400024950 ID=PGSC0003DMT400064218.v4.03 annot-version=v4.03
Sequence

ATGCTTCCACCTTACTCCGACGAGTCGCCGGACGCCGATGAAGCCATGCGCAAGCCTCCT
AAAGCCAACCATAATGATTTTCTAAGGAATGCTGTGAGTAATTTCCAGTATCAGATTTCT
ACTCATCCTCGTTTCTGGCTTTTTACCTTCTTCCTTTTTTTCCAACTTGTGGTGCTTATC
TTTACTCGCAATTCCCCTTTCCCTTTCTCAGTTCACTCCCCACCCAGTCCTCTTCCCCAA
TTCCCTTCAGAAATCGCTGTATTTCCCGATATACAGACAGCCCATCACGATGCAAATGTA
ATTTATCCCTTCGGCGATTCTGAATGCGAGTATGGTCGGGTCTATGTCTATAATTTACCA
TCCAAATTTAACAAAGATTTAGCCTTGTTGACCTGCGACGATCTAGACCCATGGAAGTGG
CAGTGTGGTCTTGTGACCAATGACGGATATGGAAAGAGATCGACGGAGCTCGCCGGAATC
TTGCCGGGAAATCTCTCCGCAGCGTGGTATCGTACAAATCAGTTCTCATTGGAGGTAATA
TTTCATTACCGGCTTTTAAACTATAGATGTAGAACCAACGACCCAGAATCTGCTACAGCT
TTCTACATTCCGTTCTACGCCGGACAGGCTGTTGGAAAATACCTTTGGACTGATGAAATC
GAAAATCGTGATTTGCTTAGCAACAAATTACTGAAATGGGTTCAGAGGCAAAAGTATTGG
AAAAAATACAAGGGTTTGGATCATTTCCTAACTCTTGGTCGGATTACATGGGATTTCCGA
CGATTAGGTGACCCGGAAAAACTCTGGGGATCCTCTTTTCTCAATCGGCCACAGATGCAG
AATGTTACGCGATTCACAATCGAGAAGGCTCCATGGGATGCTAACGATATCGGTGTACCT
TACCCTACCGGATTCCACCCTCACTCCGAGAAAGAACTCCGGGAATGGCAAAACTTTGTT
CTTTCATATAACCGCAGCAGTCTTTTCACCTTCATAGGGGCGGCGCGTGGGGATATCGAT
AGTGATTTCAGATCGAGGTTAATGAGTTACTGTAGGAACGAGTCAGACTCGTGCCGAGTC
GTGGACTGTGCCGTGATTCCCTGCTCCAATGGTTCATCAGAAATCCAAAAGGCACTTCTG
AGCTCAGACTTCTGTTTACAGCCTAAAGGGGACAGCTTGACTCGGCGGTCGGTTTTCGAT
TGCATGGTGGCCGGTTCAGTACCAGTTTTCTTCTGGAGGCGCACGGCTTACACTCAGTAC
CAGTGGTTTTTGCCGGAAGACCCGGGGAGTTATTCTGTGTTTATAGACCCTGAAGCAGTG
AGAAACGGGACAGCTTCCATTAAGGAAATTTTGAAGAGTTACAGTAAAGATCAAGTGAGG
AAAATGAGGGAAAAAGTTGTAGAGACAATTCCAAGAATAGTGTATGCAAGGCCAAGTGGA
GGTCTTGGGAGTGTCAAGGATGCATTTGAAATTGCAATTGAAGGAGTATTGAAGAGGGTC
AAGGACGAAAACGAATGGAAGGAATACGTGGATATGGGCAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400043287
PEP Infomation

pacid=37427209 transcript=PGSC0003DMT400064218 locus=PGSC0003DMG400024950 ID=PGSC0003DMT400064218.v4.03 annot-version=v4.03
Sequence

MLPPYSDESPDADEAMRKPPKANHNDFLRNAVSNFQYQISTHPRFWLFTFFLFFQLVVLI
FTRNSPFPFSVHSPPSPLPQFPSEIAVFPDIQTAHHDANVIYPFGDSECEYGRVYVYNLP
SKFNKDLALLTCDDLDPWKWQCGLVTNDGYGKRSTELAGILPGNLSAAWYRTNQFSLEVI
FHYRLLNYRCRTNDPESATAFYIPFYAGQAVGKYLWTDEIENRDLLSNKLLKWVQRQKYW
KKYKGLDHFLTLGRITWDFRRLGDPEKLWGSSFLNRPQMQNVTRFTIEKAPWDANDIGVP
YPTGFHPHSEKELREWQNFVLSYNRSSLFTFIGAARGDIDSDFRSRLMSYCRNESDSCRV
VDCAVIPCSNGSSEIQKALLSSDFCLQPKGDSLTRRSVFDCMVAGSVPVFFWRRTAYTQY
QWFLPEDPGSYSVFIDPEAVRNGTASIKEILKSYSKDQVRKMREKVVETIPRIVYARPSG
GLGSVKDAFEIAIEGVLKRVKDENEWKEYVDMGS*

Transcript Sequence

Transcript ID

PGSC0003DMT400064218
Transcript Infomation

pacid=37427209 locus=PGSC0003DMG400024950 ID=PGSC0003DMT400064218.v4.03 annot-version=v4.03
Sequence

ATGCTTCCACCTTACTCCGACGAGTCGCCGGACGCCGATGAAGCCATGCGCAAGCCTCCT
AAAGCCAACCATAATGATTTTCTAAGGAATGCTGTGAGTAATTTCCAGTATCAGATTTCT
ACTCATCCTCGTTTCTGGCTTTTTACCTTCTTCCTTTTTTTCCAACTTGTGGTGCTTATC
TTTACTCGCAATTCCCCTTTCCCTTTCTCAGTTCACTCCCCACCCAGTCCTCTTCCCCAA
TTCCCTTCAGAAATCGCTGTATTTCCCGATATACAGACAGCCCATCACGATGCAAATGTA
ATTTATCCCTTCGGCGATTCTGAATGCGAGTATGGTCGGGTCTATGTCTATAATTTACCA
TCCAAATTTAACAAAGATTTAGCCTTGTTGACCTGCGACGATCTAGACCCATGGAAGTGG
CAGTGTGGTCTTGTGACCAATGACGGATATGGAAAGAGATCGACGGAGCTCGCCGGAATC
TTGCCGGGAAATCTCTCCGCAGCGTGGTATCGTACAAATCAGTTCTCATTGGAGGTAATA
TTTCATTACCGGCTTTTAAACTATAGATGTAGAACCAACGACCCAGAATCTGCTACAGCT
TTCTACATTCCGTTCTACGCCGGACAGGCTGTTGGAAAATACCTTTGGACTGATGAAATC
GAAAATCGTGATTTGCTTAGCAACAAATTACTGAAATGGGTTCAGAGGCAAAAGTATTGG
AAAAAATACAAGGGTTTGGATCATTTCCTAACTCTTGGTCGGATTACATGGGATTTCCGA
CGATTAGGTGACCCGGAAAAACTCTGGGGATCCTCTTTTCTCAATCGGCCACAGATGCAG
AATGTTACGCGATTCACAATCGAGAAGGCTCCATGGGATGCTAACGATATCGGTGTACCT
TACCCTACCGGATTCCACCCTCACTCCGAGAAAGAACTCCGGGAATGGCAAAACTTTGTT
CTTTCATATAACCGCAGCAGTCTTTTCACCTTCATAGGGGCGGCGCGTGGGGATATCGAT
AGTGATTTCAGATCGAGGTTAATGAGTTACTGTAGGAACGAGTCAGACTCGTGCCGAGTC
GTGGACTGTGCCGTGATTCCCTGCTCCAATGGTTCATCAGAAATCCAAAAGGCACTTCTG
AGCTCAGACTTCTGTTTACAGCCTAAAGGGGACAGCTTGACTCGGCGGTCGGTTTTCGAT
TGCATGGTGGCCGGTTCAGTACCAGTTTTCTTCTGGAGGCGCACGGCTTACACTCAGTAC
CAGTGGTTTTTGCCGGAAGACCCGGGGAGTTATTCTGTGTTTATAGACCCTGAAGCAGTG
AGAAACGGGACAGCTTCCATTAAGGAAATTTTGAAGAGTTACAGTAAAGATCAAGTGAGG
AAAATGAGGGAAAAAGTTGTAGAGACAATTCCAAGAATAGTGTATGCAAGGCCAAGTGGA
GGTCTTGGGAGTGTCAAGGATGCATTTGAAATTGCAATTGAAGGAGTATTGAAGAGGGTC
AAGGACGAAAACGAATGGAAGGAATACGTGGATATGGGCAGTTGA