Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064207
CDS Infomation

pacid=37424543 polypeptide=PGSC0003DMP400043278 locus=PGSC0003DMG400024944 ID=PGSC0003DMT400064207.v4.03 annot-version=v4.03
Sequence

ATGTTAAGCTCCTGTTTTGGGAGCTGCTTTGGTGGGGGCGATGGTGATGATCTTTTATGG
CATATGGACTTGAAGCCACATGCCACCGGTGACTATTCTGTTGCTGTAGTTCAGGCCAAT
TCTTTGCTTGAAGATCAAGGTCAAGTTTTTACAACCCCGGGCGCTACTTATGTGGGTGTT
TATGATGGTCATGGTGGCCCTCAAGCTTCTCGCTTCATCAACAACAATCTCTTCCCTCAA
CTCCAAAAGCTTGCATTGGAAGAAGGAGGATTGTCTGAGGACGTGATCAGGAAAGCATTT
GATGCCATTGAGGAGGGATTCTTGCGTTTGGTGAAACAGTCTTGGCTGGATAAACCTCAG
ATTGCATCTGCGGGGTCTTGTTGTCTATTTGGAGCAATTTCAAAAGATGAATTATATGTG
GCAAATCTTGGGGACTCCAGGGCAGTGCTTGGCAGGAGAGCAGAGACTGGTCAGACGGGT
GATTCAGCAGTAGTAGTGGCAGAACGTTTGTCGATAGATCATAATGTTGGGGTTGAGGAG
GTTAGGAAGGAGGTAGAGGCACTGCATCCAGATGATTCTCATGTTGTGGTCTACACTCGA
GGGGTTTGGAGAATTAAGGGTATAATTCAGGTTTCTAGATCAATTGGTGATGTCTATCTG
AAGAAACCTGAGTTTAATAGAGATCCTATGTTCATACAATATGGATATCCTATTCCTTTA
AAAAGAGCTGTAATGTCAGCAGAGCCCTCCATATTGATCCGAAAGATAAGACCAGAAGAC
TTATTTTTGATATTTGCATCGGATGGCCTATGGGATCAACTAAGCGATGACGAAGCTGTG
GATATTGTTTTGAAGAATCCTAGAAGTGGAATAGCAAAACGATTAGTGAGAGCTGCCCTT
GAGGGAGCTGCAGAGAAGAAAGAAATGAGATACGAGGACATCAAACGACTAGAGAAGGGG
GAAAGGCGGCATGTTCACGATGATATCACAGTTATTGTGATATATTTGGATCGCCCTGGA
AGTTCCACAAATTCTGGAATGAATATTGTTAAGGGCACGAACGTCCCTCTTGACATATAC
TCCTTGAACTCTGGTCATCAGGGAGAGAACACATCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400043278
PEP Infomation

pacid=37424543 transcript=PGSC0003DMT400064207 locus=PGSC0003DMG400024944 ID=PGSC0003DMT400064207.v4.03 annot-version=v4.03
Sequence

MLSSCFGSCFGGGDGDDLLWHMDLKPHATGDYSVAVVQANSLLEDQGQVFTTPGATYVGV
YDGHGGPQASRFINNNLFPQLQKLALEEGGLSEDVIRKAFDAIEEGFLRLVKQSWLDKPQ
IASAGSCCLFGAISKDELYVANLGDSRAVLGRRAETGQTGDSAVVVAERLSIDHNVGVEE
VRKEVEALHPDDSHVVVYTRGVWRIKGIIQVSRSIGDVYLKKPEFNRDPMFIQYGYPIPL
KRAVMSAEPSILIRKIRPEDLFLIFASDGLWDQLSDDEAVDIVLKNPRSGIAKRLVRAAL
EGAAEKKEMRYEDIKRLEKGERRHVHDDITVIVIYLDRPGSSTNSGMNIVKGTNVPLDIY
SLNSGHQGENTS*

Transcript Sequence

Transcript ID

PGSC0003DMT400064207
Transcript Infomation

pacid=37424543 locus=PGSC0003DMG400024944 ID=PGSC0003DMT400064207.v4.03 annot-version=v4.03
Sequence

ATGTTAAGCTCCTGTTTTGGGAGCTGCTTTGGTGGGGGCGATGGTGATGATCTTTTATGG
CATATGGACTTGAAGCCACATGCCACCGGTGACTATTCTGTTGCTGTAGTTCAGGCCAAT
TCTTTGCTTGAAGATCAAGGTCAAGTTTTTACAACCCCGGGCGCTACTTATGTGGGTGTT
TATGATGGTCATGGTGGCCCTCAAGCTTCTCGCTTCATCAACAACAATCTCTTCCCTCAA
CTCCAAAAGCTTGCATTGGAAGAAGGAGGATTGTCTGAGGACGTGATCAGGAAAGCATTT
GATGCCATTGAGGAGGGATTCTTGCGTTTGGTGAAACAGTCTTGGCTGGATAAACCTCAG
ATTGCATCTGCGGGGTCTTGTTGTCTATTTGGAGCAATTTCAAAAGATGAATTATATGTG
GCAAATCTTGGGGACTCCAGGGCAGTGCTTGGCAGGAGAGCAGAGACTGGTCAGACGGGT
GATTCAGCAGTAGTAGTGGCAGAACGTTTGTCGATAGATCATAATGTTGGGGTTGAGGAG
GTTAGGAAGGAGGTAGAGGCACTGCATCCAGATGATTCTCATGTTGTGGTCTACACTCGA
GGGGTTTGGAGAATTAAGGGTATAATTCAGGTTTCTAGATCAATTGGTGATGTCTATCTG
AAGAAACCTGAGTTTAATAGAGATCCTATGTTCATACAATATGGATATCCTATTCCTTTA
AAAAGAGCTGTAATGTCAGCAGAGCCCTCCATATTGATCCGAAAGATAAGACCAGAAGAC
TTATTTTTGATATTTGCATCGGATGGCCTATGGGATCAACTAAGCGATGACGAAGCTGTG
GATATTGTTTTGAAGAATCCTAGAAGTGGAATAGCAAAACGATTAGTGAGAGCTGCCCTT
GAGGGAGCTGCAGAGAAGAAAGAAATGAGATACGAGGACATCAAACGACTAGAGAAGGGG
GAAAGGCGGCATGTTCACGATGATATCACAGTTATTGTGATATATTTGGATCGCCCTGGA
AGTTCCACAAATTCTGGAATGAATATTGTTAAGGGCACGAACGTCCCTCTTGACATATAC
TCCTTGAACTCTGGTCATCAGGGAGAGAACACATCTTAA