Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064177
CDS Infomation

pacid=37426874 polypeptide=PGSC0003DMP400043256 locus=PGSC0003DMG400024933 ID=PGSC0003DMT400064177.v4.03 annot-version=v4.03
Sequence

ATGACGGTAACTCTGAATGCGTATAATGTGGTTGCGGCTCGTTGTGCCGCGGAATACCTG
GAAATGTATGAAACTGTTGAGAAAGGTAACATTATCTACAAGCTTGAGGTTTTTCTTACA
TCTAGCATCTTCCGGAGCTGGAAAGATTCAATCATTGTTCTCCAAACAACAAAAGTTTTT
CTTCCCTGGTCTGAGGAATTAAAGATCGTTAGTCATTGTCTGGACTCTGTTGCATCTAAA
GCTTACATTGACACCTCAAAGGTGGACTGGTCGTATACATATAACCGCAAAAAGCTTCCA
TCAGAAAATGGAAGTGATCCGCTATGGAATGGTGTGCAAAAGCAACAGTATGTTCCAAGA
GACTGGTGGGTTGAGGACCTTTCTGAACTTCATATTGACTTGTATAAACGGGTAATAACA
ACAATAAAAACAAAGGGAGGAATGTCTCCAGAAGTAATAGGTGAGGCATTGAGAGCATAT
GCCTATAGAAGGCTACCGGGATTCAGCAAGGGTAAAATCCCAGGAAGTGATCCTGTTAAG
TATCAGTACTTGGTTGATATGATTACTTCTCTGTTGCCCACAGAAAAACATAGTGTTTCA
TGTAGTTTCTTGATCAGATTGTTACAGACGTCTGTTTCTTTGGAATGTGGAGAAACAGTA
CAAAGTGAACTGAAGAGGAGGATTGGCCAGCATCTTGATGAGGCATCGGTAGCTGACCTC
CTTCTTCGGGCACCAGCTAATGAAACTACTACATATGATGTTGACACGGTACATGAACTT
GTTCAGCAGTTCATGCTGCAGAAAAGGAGCGGTCGGAGTGATTTTCCTGAAGATAATGAA
TTTCAGGAGATGTACCCTGCATTTGCATCAGACTCTTCCAAAGTCAAGGTGGCAAGGGTG
ATTGATGGTTACCTTGCGGAAGTTTCTCGAGATCCAAATCTACCTTTGGTGAAATTTGTC
AATCTTGCTGAAATGGTGTCTGGCTTCCCTAGACCTTCCCATGATGGAATTTACCGTGCT
ATTGACATGTATCTCAAGGAACATCTAGGAATCACCAAGAGCGAAAGGAAAAGAATTTGT
AAACTAATGGACTGCCGGAAGCTATCAGCTGAGGCCTGCATGCATGCTGTGCAGAATGAG
CGCCTTCCGTTGAGAGTAGTTGTACAAGTTTTGTTCTTTGAGCAAGCCAGAGCAACAACA
TCATCTGGTGGTGGCAGCACCCCTGACCTAGCTGGAACAATCAAGTCTTTGCTTCCAGGG
GAATCCCATGGGAGCTCAAGATCTGCCACAACAAACACAGACGAGGACTGGGATGCCGTG
CCTACTGCTGAGGAACTTAAAGCTTTGAAAGGGGAGCTTGCTACTCTAAGGTTGACGGAC
AAAGAAGTTGGTTGCAATGATACTAATTCAATAGACATAAAAATGAGTGTCGAAAAAGTT
ATTGGTGGCAAAGCAAAGGGATTAATTATGTCCAAGAAGCTCTTTTCAAAACTGTGGTCC
AACAAAGATAGACTAAGCGAGAACAGCAGCTCTGATACATCAGAAAGCCCCGGTTCTTCC
AATGCTGGGGAATCAAAGTCCACCCCATCAAGAAGTAGGAGGCATTCCCTGTCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400043256
PEP Infomation

pacid=37426874 transcript=PGSC0003DMT400064177 locus=PGSC0003DMG400024933 ID=PGSC0003DMT400064177.v4.03 annot-version=v4.03
Sequence

MTVTLNAYNVVAARCAAEYLEMYETVEKGNIIYKLEVFLTSSIFRSWKDSIIVLQTTKVF
LPWSEELKIVSHCLDSVASKAYIDTSKVDWSYTYNRKKLPSENGSDPLWNGVQKQQYVPR
DWWVEDLSELHIDLYKRVITTIKTKGGMSPEVIGEALRAYAYRRLPGFSKGKIPGSDPVK
YQYLVDMITSLLPTEKHSVSCSFLIRLLQTSVSLECGETVQSELKRRIGQHLDEASVADL
LLRAPANETTTYDVDTVHELVQQFMLQKRSGRSDFPEDNEFQEMYPAFASDSSKVKVARV
IDGYLAEVSRDPNLPLVKFVNLAEMVSGFPRPSHDGIYRAIDMYLKEHLGITKSERKRIC
KLMDCRKLSAEACMHAVQNERLPLRVVVQVLFFEQARATTSSGGGSTPDLAGTIKSLLPG
ESHGSSRSATTNTDEDWDAVPTAEELKALKGELATLRLTDKEVGCNDTNSIDIKMSVEKV
IGGKAKGLIMSKKLFSKLWSNKDRLSENSSSDTSESPGSSNAGESKSTPSRSRRHSLS*

Transcript Sequence

Transcript ID

PGSC0003DMT400064177
Transcript Infomation

pacid=37426874 locus=PGSC0003DMG400024933 ID=PGSC0003DMT400064177.v4.03 annot-version=v4.03
Sequence

ATGACGGTAACTCTGAATGCGTATAATGTGGTTGCGGCTCGTTGTGCCGCGGAATACCTG
GAAATGTATGAAACTGTTGAGAAAGGTAACATTATCTACAAGCTTGAGGTTTTTCTTACA
TCTAGCATCTTCCGGAGCTGGAAAGATTCAATCATTGTTCTCCAAACAACAAAAGTTTTT
CTTCCCTGGTCTGAGGAATTAAAGATCGTTAGTCATTGTCTGGACTCTGTTGCATCTAAA
GCTTACATTGACACCTCAAAGGTGGACTGGTCGTATACATATAACCGCAAAAAGCTTCCA
TCAGAAAATGGAAGTGATCCGCTATGGAATGGTGTGCAAAAGCAACAGTATGTTCCAAGA
GACTGGTGGGTTGAGGACCTTTCTGAACTTCATATTGACTTGTATAAACGGGTAATAACA
ACAATAAAAACAAAGGGAGGAATGTCTCCAGAAGTAATAGGTGAGGCATTGAGAGCATAT
GCCTATAGAAGGCTACCGGGATTCAGCAAGGGTAAAATCCCAGGAAGTGATCCTGTTAAG
TATCAGTACTTGGTTGATATGATTACTTCTCTGTTGCCCACAGAAAAACATAGTGTTTCA
TGTAGTTTCTTGATCAGATTGTTACAGACGTCTGTTTCTTTGGAATGTGGAGAAACAGTA
CAAAGTGAACTGAAGAGGAGGATTGGCCAGCATCTTGATGAGGCATCGGTAGCTGACCTC
CTTCTTCGGGCACCAGCTAATGAAACTACTACATATGATGTTGACACGGTACATGAACTT
GTTCAGCAGTTCATGCTGCAGAAAAGGAGCGGTCGGAGTGATTTTCCTGAAGATAATGAA
TTTCAGGAGATGTACCCTGCATTTGCATCAGACTCTTCCAAAGTCAAGGTGGCAAGGGTG
ATTGATGGTTACCTTGCGGAAGTTTCTCGAGATCCAAATCTACCTTTGGTGAAATTTGTC
AATCTTGCTGAAATGGTGTCTGGCTTCCCTAGACCTTCCCATGATGGAATTTACCGTGCT
ATTGACATGTATCTCAAGGAACATCTAGGAATCACCAAGAGCGAAAGGAAAAGAATTTGT
AAACTAATGGACTGCCGGAAGCTATCAGCTGAGGCCTGCATGCATGCTGTGCAGAATGAG
CGCCTTCCGTTGAGAGTAGTTGTACAAGTTTTGTTCTTTGAGCAAGCCAGAGCAACAACA
TCATCTGGTGGTGGCAGCACCCCTGACCTAGCTGGAACAATCAAGTCTTTGCTTCCAGGG
GAATCCCATGGGAGCTCAAGATCTGCCACAACAAACACAGACGAGGACTGGGATGCCGTG
CCTACTGCTGAGGAACTTAAAGCTTTGAAAGGGGAGCTTGCTACTCTAAGGTTGACGGAC
AAAGAAGTTGGTTGCAATGATACTAATTCAATAGACATAAAAATGAGTGTCGAAAAAGTT
ATTGGTGGCAAAGCAAAGGGATTAATTATGTCCAAGAAGCTCTTTTCAAAACTGTGGTCC
AACAAAGATAGACTAAGCGAGAACAGCAGCTCTGATACATCAGAAAGCCCCGGTTCTTCC
AATGCTGGGGAATCAAAGTCCACCCCATCAAGAAGTAGGAGGCATTCCCTGTCTTAA