Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064159
CDS Infomation

pacid=37436904 polypeptide=PGSC0003DMP400043240 locus=PGSC0003DMG400024925 ID=PGSC0003DMT400064159.v4.03 annot-version=v4.03
Sequence

ATGAAGGTTCCGAGGAGGAGTGCCCGTCAGAAAAACTTGCAGAAAGATGCAGAGAAAGAA
GAAGCAATTAACTTATTGGAACAAAAGGAGAATACGGAAGAGGTGGTAGAAAGAAGCAAA
GATGAAGAAAATTTTGTAGAATCCCCTGTTGTTTCTGACGATGATGACGAGGATTTTTCT
GATGATGATGGATCACTTGGTGAATCTGGATCAGAAGATAGTCATCTATCCGGGGAAGAG
GATGTTTTTGTATCAAGTGACGGTGAAGATTCTTTTGATGCCAAAAGTGATGATGTTAGT
GGTAATGGTGCAAGTGGCAGTGGTAGAGATGATACTGAACATGGTAAAGATGACGATGCT
GAAAGCGATGATTCCCGCACAGTAGTTGAAGAGAGCGATTCGTCTGAAGATGAGGTTGAT
CCTCGTAATACTGTTGGAGATGTTCCGTTGAAATGGTACAAAGAAGAGGAACATATTGGA
TATGATCTTGCAGGGAAGAAGATCAAAAAAAAAGAGAGACAAGATAAATTGGACTCATTT
CTTGCCAGTGTTGATGATTCCAAGAATTGGCGTAAGATTTATGATGAATATAATGATGAA
GAAGTTGAACTCACGAAAGAAGAAGTTAAGGTCATCAAAAGATTGCTGAAAGGAAAGGCA
CCTCATGCTGATTTTGATCCATATGCGCCTTATGTTGACTGGTTTTCCTGGGATGACTCG
AAGCATCCTCTTTCTAGTGCACCAGAACCAAAGAGACGTTTTATCCCTTCAAAATGGGAG
AGTAAAAAGGTTGTCCAATATGTGCGGGCAATTCGAAAGGGACTTATAAAATTTGACGAG
AAGCCAAAGGAAGAGCCAAGTGCCTACCTCTTATGGGGAGATGATTCCAGTGCAATAGAT
AGACAAGGGTTGGCATATATTCCTGCTCCAAAACCAAAACTGCCTGGTCACGAGGAGTCT
TATAACCCTTCTTTAGAATATATTCCTACACAAGAAGAGATCAATTCTTATCAGCTTATG
TTTGAGGAAGACCGACCAAAGTTTATCCCGAAACGGTTCACATCGTTGAGAAATGTTCCA
GCATACGAGAAAGCAGTCAATGAAAATTTTGGCCGCTGTTTGGATCTTTATTTATGTCCA
AGGGCTCGGAAAAAACGTATTAATATTGATCCCGAGTCTTTGAAGCCCAAGTTGCCAAGT
CGCAAGGATCTCAGACCTTATCCAACGTCGTGTTATCTCGAGTATAAAGGTCATAAAGGT
CCCGTTGTGTCGATTTCTACAGAATCTACTGGGCAGTGGATTGCTTCTGGTTCAAGTGAT
GGAACGGTGCGCATTTGGGAGGTTGAAACTGGAAGGTGTATCAGGATCTGGGAGCTTGGG
GAATCTGTAAGTCATGTCTCCTGGAATCCTTTGCCTGAACGTCCCATATTGGCAGTCTGC
ATGGGAGAAGATGTATATCTTTTGAATACTGGACTTGGCAATGCAGAAGAACAGAAGAGT
CTTGAAGAGCTTTTGCGTGTTGAAACTCCATCAACCCCTGATGACTCTGATAATGATAAA
ACCGCTGTGAATTGGGTTCAAGATGATAAGCACGGGGGAATCAGGTTGAAGCACTTTAAG
ACTGTTTCTTCAGTTGAGTGGCATCGGAAGGGCGACTATTTCTCAACGCTTATGCCATCT
GCCCAATCAAAAGCAGTTCTGATTCACCTGCTCTCAAAGAAACAGACTCAGAGAATACCA
TTCAAGCTTCATGGACTTCCAGTTTCAACAGCTTTCCATCCCTCTCGCTCTGCCTTCTTT
ATTTCAACAAAGAAAAATATTCGTGTTTATGATCTCTTGAAGCAAAAGCTCATTAAGAAG
CTAGAGACAGGGGTTCGCGAAGTCTCGTCTATTGCTATTCATCCTGGTGGTGACAATCTT
ATTGTAGGGAGCAAAGACGGGAAACTGTGCTGGTTTGACATGGACCTTTCATCTCAACCT
TACAGAGTTCTCAATTGCCATCCGAAGGACATCAACAGAGTGGCCTTTCATCGCTCCTAT
CCTTTGTTTGCTTCATCTTCTGACGATTGTACGGCATACGTTTTCCATGGCATGGTTTAT
TCAGATCTAAACCAGAATCCATTGATTGTACCTCTGGAGATTCTTCGTGGTCATGCCAGT
GAAAATGGAAGAGGTGTCATGGACTGCAAGTTCCATCCTAGGCAACCATGGTTGTTTACT
GCAGGAGCAGACTCTGTGATCAAGCTCTACTGTCACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400043240
PEP Infomation

pacid=37436904 transcript=PGSC0003DMT400064159 locus=PGSC0003DMG400024925 ID=PGSC0003DMT400064159.v4.03 annot-version=v4.03
Sequence

MKVPRRSARQKNLQKDAEKEEAINLLEQKENTEEVVERSKDEENFVESPVVSDDDDEDFS
DDDGSLGESGSEDSHLSGEEDVFVSSDGEDSFDAKSDDVSGNGASGSGRDDTEHGKDDDA
ESDDSRTVVEESDSSEDEVDPRNTVGDVPLKWYKEEEHIGYDLAGKKIKKKERQDKLDSF
LASVDDSKNWRKIYDEYNDEEVELTKEEVKVIKRLLKGKAPHADFDPYAPYVDWFSWDDS
KHPLSSAPEPKRRFIPSKWESKKVVQYVRAIRKGLIKFDEKPKEEPSAYLLWGDDSSAID
RQGLAYIPAPKPKLPGHEESYNPSLEYIPTQEEINSYQLMFEEDRPKFIPKRFTSLRNVP
AYEKAVNENFGRCLDLYLCPRARKKRINIDPESLKPKLPSRKDLRPYPTSCYLEYKGHKG
PVVSISTESTGQWIASGSSDGTVRIWEVETGRCIRIWELGESVSHVSWNPLPERPILAVC
MGEDVYLLNTGLGNAEEQKSLEELLRVETPSTPDDSDNDKTAVNWVQDDKHGGIRLKHFK
TVSSVEWHRKGDYFSTLMPSAQSKAVLIHLLSKKQTQRIPFKLHGLPVSTAFHPSRSAFF
ISTKKNIRVYDLLKQKLIKKLETGVREVSSIAIHPGGDNLIVGSKDGKLCWFDMDLSSQP
YRVLNCHPKDINRVAFHRSYPLFASSSDDCTAYVFHGMVYSDLNQNPLIVPLEILRGHAS
ENGRGVMDCKFHPRQPWLFTAGADSVIKLYCH*

Transcript Sequence

Transcript ID

PGSC0003DMT400064159
Transcript Infomation

pacid=37436904 locus=PGSC0003DMG400024925 ID=PGSC0003DMT400064159.v4.03 annot-version=v4.03
Sequence

ATGAAGGTTCCGAGGAGGAGTGCCCGTCAGAAAAACTTGCAGAAAGATGCAGAGAAAGAA
GAAGCAATTAACTTATTGGAACAAAAGGAGAATACGGAAGAGGTGGTAGAAAGAAGCAAA
GATGAAGAAAATTTTGTAGAATCCCCTGTTGTTTCTGACGATGATGACGAGGATTTTTCT
GATGATGATGGATCACTTGGTGAATCTGGATCAGAAGATAGTCATCTATCCGGGGAAGAG
GATGTTTTTGTATCAAGTGACGGTGAAGATTCTTTTGATGCCAAAAGTGATGATGTTAGT
GGTAATGGTGCAAGTGGCAGTGGTAGAGATGATACTGAACATGGTAAAGATGACGATGCT
GAAAGCGATGATTCCCGCACAGTAGTTGAAGAGAGCGATTCGTCTGAAGATGAGGTTGAT
CCTCGTAATACTGTTGGAGATGTTCCGTTGAAATGGTACAAAGAAGAGGAACATATTGGA
TATGATCTTGCAGGGAAGAAGATCAAAAAAAAAGAGAGACAAGATAAATTGGACTCATTT
CTTGCCAGTGTTGATGATTCCAAGAATTGGCGTAAGATTTATGATGAATATAATGATGAA
GAAGTTGAACTCACGAAAGAAGAAGTTAAGGTCATCAAAAGATTGCTGAAAGGAAAGGCA
CCTCATGCTGATTTTGATCCATATGCGCCTTATGTTGACTGGTTTTCCTGGGATGACTCG
AAGCATCCTCTTTCTAGTGCACCAGAACCAAAGAGACGTTTTATCCCTTCAAAATGGGAG
AGTAAAAAGGTTGTCCAATATGTGCGGGCAATTCGAAAGGGACTTATAAAATTTGACGAG
AAGCCAAAGGAAGAGCCAAGTGCCTACCTCTTATGGGGAGATGATTCCAGTGCAATAGAT
AGACAAGGGTTGGCATATATTCCTGCTCCAAAACCAAAACTGCCTGGTCACGAGGAGTCT
TATAACCCTTCTTTAGAATATATTCCTACACAAGAAGAGATCAATTCTTATCAGCTTATG
TTTGAGGAAGACCGACCAAAGTTTATCCCGAAACGGTTCACATCGTTGAGAAATGTTCCA
GCATACGAGAAAGCAGTCAATGAAAATTTTGGCCGCTGTTTGGATCTTTATTTATGTCCA
AGGGCTCGGAAAAAACGTATTAATATTGATCCCGAGTCTTTGAAGCCCAAGTTGCCAAGT
CGCAAGGATCTCAGACCTTATCCAACGTCGTGTTATCTCGAGTATAAAGGTCATAAAGGT
CCCGTTGTGTCGATTTCTACAGAATCTACTGGGCAGTGGATTGCTTCTGGTTCAAGTGAT
GGAACGGTGCGCATTTGGGAGGTTGAAACTGGAAGGTGTATCAGGATCTGGGAGCTTGGG
GAATCTGTAAGTCATGTCTCCTGGAATCCTTTGCCTGAACGTCCCATATTGGCAGTCTGC
ATGGGAGAAGATGTATATCTTTTGAATACTGGACTTGGCAATGCAGAAGAACAGAAGAGT
CTTGAAGAGCTTTTGCGTGTTGAAACTCCATCAACCCCTGATGACTCTGATAATGATAAA
ACCGCTGTGAATTGGGTTCAAGATGATAAGCACGGGGGAATCAGGTTGAAGCACTTTAAG
ACTGTTTCTTCAGTTGAGTGGCATCGGAAGGGCGACTATTTCTCAACGCTTATGCCATCT
GCCCAATCAAAAGCAGTTCTGATTCACCTGCTCTCAAAGAAACAGACTCAGAGAATACCA
TTCAAGCTTCATGGACTTCCAGTTTCAACAGCTTTCCATCCCTCTCGCTCTGCCTTCTTT
ATTTCAACAAAGAAAAATATTCGTGTTTATGATCTCTTGAAGCAAAAGCTCATTAAGAAG
CTAGAGACAGGGGTTCGCGAAGTCTCGTCTATTGCTATTCATCCTGGTGGTGACAATCTT
ATTGTAGGGAGCAAAGACGGGAAACTGTGCTGGTTTGACATGGACCTTTCATCTCAACCT
TACAGAGTTCTCAATTGCCATCCGAAGGACATCAACAGAGTGGCCTTTCATCGCTCCTAT
CCTTTGTTTGCTTCATCTTCTGACGATTGTACGGCATACGTTTTCCATGGCATGGTTTAT
TCAGATCTAAACCAGAATCCATTGATTGTACCTCTGGAGATTCTTCGTGGTCATGCCAGT
GAAAATGGAAGAGGTGTCATGGACTGCAAGTTCCATCCTAGGCAACCATGGTTGTTTACT
GCAGGAGCAGACTCTGTGATCAAGCTCTACTGTCACTAA