Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064124
CDS Infomation

pacid=37439104 polypeptide=PGSC0003DMP400043214 locus=PGSC0003DMG400024917 ID=PGSC0003DMT400064124.v4.03 annot-version=v4.03
Sequence

ATGAAACGCCGTCGTGGAAGCAAAAAAGGTAAATCAAAGAAGCTTCGAACAACAGGTACA
AGTGAGGGAGCATCTAATAATGGTAGCATGAATTCAGAAACTAGTTCTGGTACGGAAGAC
ATTGACAATGATGGAGTTAACTCTGGGGTTGAGGCTGAGACACCATCCTCTACCGGAACT
GCTCAACCGGAAAAACCTGTGATTGTTTATTCTGGTGTGCCAAGGGACAAACCTCCAGGT
TTAGCAGTTTATGGACGTATGAAAGTAAAACTCAAAACAAAAAAAACATTAGACACTCAG
CTCAATTCTTCAGAAGTAGTCACTCATAGTGATACTGATAAAAGTAGCCAGCAAGCTGGT
CCAGAAAAACAGGTTGTCTCTAATGAGAAAATGGAAGACAGTGCAAACTCATTGCCTGAG
GCTAATGTAACTACCCCAGGAAATGTGCTAAAAAAACCTGGAGGCATAAAGATCAAGTCT
TCAAAGGGCTTCTCTTCAAGCATGAGCCCTTGTAGTAATGTTGAAATGGTGAAGGAAGAG
AAGACAAAAAAACCAGAGCCTGAGTTACTTCACCGTGATTTGAGATTAAACAAGCAAGAA
CTAGACACTGCTTTGGAGGTTATAAGAAAAATTATGAAAATGGATGCTGCAGAGCCCTTC
AATACTCCAGTCGATCCTATTGCTCTTGGAATTCCTGATTATTTTGATGTCATAAATACA
CCTATGGATTTTGGGACAATATGCAGTAATCTGGAAAGTGGTGTCAAATACATGAATTCC
GAGGATGTCTATAAGGATGTGCAGTATATATGGGACAACTGCTACAAGTATAATAATAAA
GGTGATTATGTTATGGAGCTCATGAAGCGAGTGAAAAAGAACTTCGCAAAGTACTGGACA
GCAGCTGGCTTATACAGTGATCATCTGCAAAGTGCCGAAAGCAGTCAAATTAAGGAGACT
ACACCTTCAAGTCATGGAAAGGAACCTACAAAAAGTGGTTCTTTAACTCACAAACACAAC
AAAAGGCTTCAAGGGCTCAAGAAGCACAAAGAAGGCTGCCTTTGTGCTATATGTGTGATG
ATACGGCGCAGGCAGGAGCGGGAAGAGACCACTCAGTCCTTGGATGACCAAGGCGAGGCT
AGTGATGATTATCCAGATGGCATGAAGCCCGAGGAAACTTCACCTGTAGAAAGTCGAGAG
TACACCTCATCAAATATGGAGAACTCACCAGAGACAGATGTTGACACCATTATGCAAGAA
AACGGAGCAGAGAGAAAGTTGACTGAAAATCAGGACACTTTATGTGAGAAGCTAGGGGAA
GGGATGAGGAGTGAAATGGGAATCCAAAGTAAAAGAACGGGGGTCACTTCTGAGCATTTG
CAGTCAGGTTATACATCTTTAGATGAGCACAAAGCACATGATCAGAAGCAAAATGGGGAG
CCAGGTGGAGATTTGCTGAATGACAGTCGAAAAGAAAATCTGCAGCATGGGGATGAAAAT
GCTGCAACTGGGCTACAGAGGCCAAAGGAATTGCAAGACAAGTACAAGAAGGCCAAGATG
TGGGAGAACTTGCGTTATCTTGAAAATACAACAGTTATGGATTTATCTCGAGTCCTGTTT
GCTGATAATCAAAGATCTGTCTGGAATGGACCACATTCACTGGTTAAGCGTGGGGATTCC
ACCACCCGCAAGAGCTCCATTCATGCAGCTATTTCCATGCTGATGCAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400043214
PEP Infomation

pacid=37439104 transcript=PGSC0003DMT400064124 locus=PGSC0003DMG400024917 ID=PGSC0003DMT400064124.v4.03 annot-version=v4.03
Sequence

MKRRRGSKKGKSKKLRTTGTSEGASNNGSMNSETSSGTEDIDNDGVNSGVEAETPSSTGT
AQPEKPVIVYSGVPRDKPPGLAVYGRMKVKLKTKKTLDTQLNSSEVVTHSDTDKSSQQAG
PEKQVVSNEKMEDSANSLPEANVTTPGNVLKKPGGIKIKSSKGFSSSMSPCSNVEMVKEE
KTKKPEPELLHRDLRLNKQELDTALEVIRKIMKMDAAEPFNTPVDPIALGIPDYFDVINT
PMDFGTICSNLESGVKYMNSEDVYKDVQYIWDNCYKYNNKGDYVMELMKRVKKNFAKYWT
AAGLYSDHLQSAESSQIKETTPSSHGKEPTKSGSLTHKHNKRLQGLKKHKEGCLCAICVM
IRRRQEREETTQSLDDQGEASDDYPDGMKPEETSPVESREYTSSNMENSPETDVDTIMQE
NGAERKLTENQDTLCEKLGEGMRSEMGIQSKRTGVTSEHLQSGYTSLDEHKAHDQKQNGE
PGGDLLNDSRKENLQHGDENAATGLQRPKELQDKYKKAKMWENLRYLENTTVMDLSRVLF
ADNQRSVWNGPHSLVKRGDSTTRKSSIHAAISMLMQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400064124
Transcript Infomation

pacid=37439104 locus=PGSC0003DMG400024917 ID=PGSC0003DMT400064124.v4.03 annot-version=v4.03
Sequence

ATGAAACGCCGTCGTGGAAGCAAAAAAGGTAAATCAAAGAAGCTTCGAACAACAGGTACA
AGTGAGGGAGCATCTAATAATGGTAGCATGAATTCAGAAACTAGTTCTGGTACGGAAGAC
ATTGACAATGATGGAGTTAACTCTGGGGTTGAGGCTGAGACACCATCCTCTACCGGAACT
GCTCAACCGGAAAAACCTGTGATTGTTTATTCTGGTGTGCCAAGGGACAAACCTCCAGGT
TTAGCAGTTTATGGACGTATGAAAGTAAAACTCAAAACAAAAAAAACATTAGACACTCAG
CTCAATTCTTCAGAAGTAGTCACTCATAGTGATACTGATAAAAGTAGCCAGCAAGCTGGT
CCAGAAAAACAGGTTGTCTCTAATGAGAAAATGGAAGACAGTGCAAACTCATTGCCTGAG
GCTAATGTAACTACCCCAGGAAATGTGCTAAAAAAACCTGGAGGCATAAAGATCAAGTCT
TCAAAGGGCTTCTCTTCAAGCATGAGCCCTTGTAGTAATGTTGAAATGGTGAAGGAAGAG
AAGACAAAAAAACCAGAGCCTGAGTTACTTCACCGTGATTTGAGATTAAACAAGCAAGAA
CTAGACACTGCTTTGGAGGTTATAAGAAAAATTATGAAAATGGATGCTGCAGAGCCCTTC
AATACTCCAGTCGATCCTATTGCTCTTGGAATTCCTGATTATTTTGATGTCATAAATACA
CCTATGGATTTTGGGACAATATGCAGTAATCTGGAAAGTGGTGTCAAATACATGAATTCC
GAGGATGTCTATAAGGATGTGCAGTATATATGGGACAACTGCTACAAGTATAATAATAAA
GGTGATTATGTTATGGAGCTCATGAAGCGAGTGAAAAAGAACTTCGCAAAGTACTGGACA
GCAGCTGGCTTATACAGTGATCATCTGCAAAGTGCCGAAAGCAGTCAAATTAAGGAGACT
ACACCTTCAAGTCATGGAAAGGAACCTACAAAAAGTGGTTCTTTAACTCACAAACACAAC
AAAAGGCTTCAAGGGCTCAAGAAGCACAAAGAAGGCTGCCTTTGTGCTATATGTGTGATG
ATACGGCGCAGGCAGGAGCGGGAAGAGACCACTCAGTCCTTGGATGACCAAGGCGAGGCT
AGTGATGATTATCCAGATGGCATGAAGCCCGAGGAAACTTCACCTGTAGAAAGTCGAGAG
TACACCTCATCAAATATGGAGAACTCACCAGAGACAGATGTTGACACCATTATGCAAGAA
AACGGAGCAGAGAGAAAGTTGACTGAAAATCAGGACACTTTATGTGAGAAGCTAGGGGAA
GGGATGAGGAGTGAAATGGGAATCCAAAGTAAAAGAACGGGGGTCACTTCTGAGCATTTG
CAGTCAGGTTATACATCTTTAGATGAGCACAAAGCACATGATCAGAAGCAAAATGGGGAG
CCAGGTGGAGATTTGCTGAATGACAGTCGAAAAGAAAATCTGCAGCATGGGGATGAAAAT
GCTGCAACTGGGCTACAGAGGCCAAAGGAATTGCAAGACAAGTACAAGAAGGCCAAGATG
TGGGAGAACTTGCGTTATCTTGAAAATACAACAGTTATGGATTTATCTCGAGTCCTGTTT
GCTGATAATCAAAGATCTGTCTGGAATGGACCACATTCACTGGTTAAGCGTGGGGATTCC
ACCACCCGCAAGAGCTCCATTCATGCAGCTATTTCCATGCTGATGCAGTAG