Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064117
CDS Infomation

pacid=37436664 polypeptide=PGSC0003DMP400043210 locus=PGSC0003DMG400024915 ID=PGSC0003DMT400064117.v4.03 annot-version=v4.03
Sequence

ATGTCTTTCCAAGTAAGCAAATACAACATATATCTGTCATTTATGAGTTGCATTTGTGCA
GAGCTCCATAAGAAAGAGACTTGCGAAGCTGTTACCATAATTGAAACACCTCCAATGATT
GTTGTTGGGGTTGTCGGTTATGTGAAAACACCACGTGGCCTTCGCTGCCTGAGCACTGTC
TGGGCTCAGCATCTTAGTGAAGAAATTAAAAGGAGGTTCTACAAGAACTGGTGCATGTCC
AAAAAGAAGGCCTTTGCCAAGTACTCAAAGAAGTATGAAACTGATGAAGGCAAGAAAGAT
ATTAATGCACAGTTGGAGAAGATGAAGAAGTATTGTTCTGTGATCCGCGTTCTTGCCCAT
ACTCAGATTAGGAAAATGAAAGGTCTCAAGCAAAAGAAGGCACATCTGATGGAGATTCAG
GTTAATGGTGGGGATGTTGCCCAGAAGGTTGATTATGCCTATGGCTTTTTTGAGAAACAG
ATTCCCATTGATGCAATTTTCCAGAAGGATGAGATGATTGATATCATTGGTGTGACTAAA
GGTAAGGGGTATGAGGGTGTGGTTACTCGTTGGGGCGTGACCCGGCTCCCACGTAAGACT
CATCGTGGTCTTAGAAAGGTGGCTTGTATTGGTGCTTGGCATCCAGCTAGGGTGTCATTT
ACTGTTGCTAGGGCTGGGCAGAATGGTTATCACCATCGTACTGAGATGAACAAGAAAGTC
TACAGGCTGGGCAAGGCTGGACAGGAGTCTCATTCTGCCATAACTGAGTTTGACAGGACT
GAGAAGGAAATCACTCCAATCGGTGGATTCCCTCACTATGGTGTTGTGAAAGAGGACTTT
CTGTTGATTAAGGGCTGCTGTGTTGGACCAAAGAAGCGTGTTGTGACTTTGAGGCAGTCG
TTGTTGAACCAGACATCTAGGGTTGCATTGGAGGAGATCAAGCTCAAGTTCATTGACACA
TCATCCAAGTTTGGCCATGGACGCTTCCAGACTACACAGGAGAAGGCAAAATTCTATGGA
CGCCTTAAAGCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400043210
PEP Infomation

pacid=37436664 transcript=PGSC0003DMT400064117 locus=PGSC0003DMG400024915 ID=PGSC0003DMT400064117.v4.03 annot-version=v4.03
Sequence

MSFQVSKYNIYLSFMSCICAELHKKETCEAVTIIETPPMIVVGVVGYVKTPRGLRCLSTV
WAQHLSEEIKRRFYKNWCMSKKKAFAKYSKKYETDEGKKDINAQLEKMKKYCSVIRVLAH
TQIRKMKGLKQKKAHLMEIQVNGGDVAQKVDYAYGFFEKQIPIDAIFQKDEMIDIIGVTK
GKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKV
YRLGKAGQESHSAITEFDRTEKEITPIGGFPHYGVVKEDFLLIKGCCVGPKKRVVTLRQS
LLNQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKAKFYGRLKA*

Transcript Sequence

Transcript ID

PGSC0003DMT400064117
Transcript Infomation

pacid=37436664 locus=PGSC0003DMG400024915 ID=PGSC0003DMT400064117.v4.03 annot-version=v4.03
Sequence

ATGTCTTTCCAAGTAAGCAAATACAACATATATCTGTCATTTATGAGTTGCATTTGTGCA
GAGCTCCATAAGAAAGAGACTTGCGAAGCTGTTACCATAATTGAAACACCTCCAATGATT
GTTGTTGGGGTTGTCGGTTATGTGAAAACACCACGTGGCCTTCGCTGCCTGAGCACTGTC
TGGGCTCAGCATCTTAGTGAAGAAATTAAAAGGAGGTTCTACAAGAACTGGTGCATGTCC
AAAAAGAAGGCCTTTGCCAAGTACTCAAAGAAGTATGAAACTGATGAAGGCAAGAAAGAT
ATTAATGCACAGTTGGAGAAGATGAAGAAGTATTGTTCTGTGATCCGCGTTCTTGCCCAT
ACTCAGATTAGGAAAATGAAAGGTCTCAAGCAAAAGAAGGCACATCTGATGGAGATTCAG
GTTAATGGTGGGGATGTTGCCCAGAAGGTTGATTATGCCTATGGCTTTTTTGAGAAACAG
ATTCCCATTGATGCAATTTTCCAGAAGGATGAGATGATTGATATCATTGGTGTGACTAAA
GGTAAGGGGTATGAGGGTGTGGTTACTCGTTGGGGCGTGACCCGGCTCCCACGTAAGACT
CATCGTGGTCTTAGAAAGGTGGCTTGTATTGGTGCTTGGCATCCAGCTAGGGTGTCATTT
ACTGTTGCTAGGGCTGGGCAGAATGGTTATCACCATCGTACTGAGATGAACAAGAAAGTC
TACAGGCTGGGCAAGGCTGGACAGGAGTCTCATTCTGCCATAACTGAGTTTGACAGGACT
GAGAAGGAAATCACTCCAATCGGTGGATTCCCTCACTATGGTGTTGTGAAAGAGGACTTT
CTGTTGATTAAGGGCTGCTGTGTTGGACCAAAGAAGCGTGTTGTGACTTTGAGGCAGTCG
TTGTTGAACCAGACATCTAGGGTTGCATTGGAGGAGATCAAGCTCAAGTTCATTGACACA
TCATCCAAGTTTGGCCATGGACGCTTCCAGACTACACAGGAGAAGGCAAAATTCTATGGA
CGCCTTAAAGCTTGA