Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064114
CDS Infomation

pacid=37435377 polypeptide=PGSC0003DMP400043207 locus=PGSC0003DMG400024913 ID=PGSC0003DMT400064114.v4.03 annot-version=v4.03
Sequence

ATGGTTGTTCTAGCGGCTTCCATAATTTCTAAATCTGGCAAAGCTCTTGTCTCGAGGCAA
TTTGTTGATATGTCTCGTATAAGAATTGAAGGATATCTTGCAGCTTTTCCTAAATTGGTT
GGTATAGGAAAGCAACATACATATATTGAGACTGAAAATGTGCGATATGTTTATCAGCCG
ATAGAATCTCTGTACTTGCTCCTTGTGACCAACAAACAGAGCAACATTCTTGAAGATTTG
GAGACACTGAGGCTGCTGTCTAAACTAGTGCCTGAATATTCTTATTCACTAGATGAGGAG
GGAATTGGCAGGACAGCTTTTGAGCTTATTTTTGCATTTGATGAAGTGATTTCTCTTGGG
CACAAGGAAAATGTTACAGTTACACAAGTCAAGCAGTACTGTGAAATGGAGAGTCATGAG
GAGAGATTACACAAGTTAGTCTTACAGAACAAGATAAATGAAACTAAGGATGTCATGAAG
CGTAAAGCCAGTGAGATTGACAAAAGCAAGATTGAGAGGAATAGAGGTGACAAAGGAGGT
TTCATGTCACTGCAATCCATGGGTTCTGGAAGAATCGATACTGGCTTTGGCAGCGACTCA
GGCATATCCAACACAGGAGGCAGTGGTTTTGGTAGTGGTTCTGGATTTGGTCTAACCCCT
GAAGTGGACACATTTTCCACCAAATCCAAGGGTCGTCCAGCTGCATCTGCTACTGCTCCA
CCGAAAGGTCTCGGTATGCAGCTGGGTAAAACACAGAAGACCAACCAATTTCTGGAATCC
CTAAAAGCTGAGGGTGAGGTAATTGTCGAGGATGTGAGGCCAAGCGTTGGTCAGGCCAAA
CCAGCTGCTGCTCCACTAACTGATCCCGTCACATTGACTGTTGAAGAGAAGATAAATGTA
ACACTAAAGCGTGATGGTGGTGTCAGCAATTTTGTCGTCCAGGGTACTTTGTCTCTCCAA
ATTCTGAACCAAGAAGATGCTTTTATCCAAGTGCAGATTGAAACCAGTGGAAATCCAGCA
ATCCTCTTCAAAGCACACCCAAACATGAACAAGGAGTTGTTTGCAAATGAAAATATTCTG
GGCCTTAAAGATCCCAATAGGCCATTTCCCACAGGGCAAGGTGGTGATGGTGTTAGTCTT
TTGAGGTGGAGAATGCAAAGCACAGATGAGTCAATTTTGCCTTTGACAATTAACTGCTGG
CCTTCAGTTTCTGGAAGTGAAACCTATGTGAATATCGAGTATGAAACCCCCGCACAGATT
GATCTACAAAATGTTGTAATTTCTGTACCCCTTCCAGCTCTCAGGGAGGCTCCAAATGTA
CAACAGATAGATGGAGAGTGGAGGTACGATTCCAGAAATTCTGTTTTGGAGTGGTCTGTT
CTTCTCATTGACAATTCGAACCGCAGTGGAGCACTAGAATTTGTTGTTCCAGCAGCTGAT
CCATCAGCCTTCTTTCCAATTTCTGCACAGTTTACTTCCTCAAGAACCTTCAGTGACGTG
AAGGTTGTCAACGTGCTGCCTCTAAAAGGTGGGGCTACTCCCAAGCATGCTCAAAGAACA
CTGCTGGCCACGGAGACTTACCAAGTTGTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400043207
PEP Infomation

pacid=37435377 transcript=PGSC0003DMT400064114 locus=PGSC0003DMG400024913 ID=PGSC0003DMT400064114.v4.03 annot-version=v4.03
Sequence

MVVLAASIISKSGKALVSRQFVDMSRIRIEGYLAAFPKLVGIGKQHTYIETENVRYVYQP
IESLYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGIGRTAFELIFAFDEVISLG
HKENVTVTQVKQYCEMESHEERLHKLVLQNKINETKDVMKRKASEIDKSKIERNRGDKGG
FMSLQSMGSGRIDTGFGSDSGISNTGGSGFGSGSGFGLTPEVDTFSTKSKGRPAASATAP
PKGLGMQLGKTQKTNQFLESLKAEGEVIVEDVRPSVGQAKPAAAPLTDPVTLTVEEKINV
TLKRDGGVSNFVVQGTLSLQILNQEDAFIQVQIETSGNPAILFKAHPNMNKELFANENIL
GLKDPNRPFPTGQGGDGVSLLRWRMQSTDESILPLTINCWPSVSGSETYVNIEYETPAQI
DLQNVVISVPLPALREAPNVQQIDGEWRYDSRNSVLEWSVLLIDNSNRSGALEFVVPAAD
PSAFFPISAQFTSSRTFSDVKVVNVLPLKGGATPKHAQRTLLATETYQVV*

Transcript Sequence

Transcript ID

PGSC0003DMT400064114
Transcript Infomation

pacid=37435377 locus=PGSC0003DMG400024913 ID=PGSC0003DMT400064114.v4.03 annot-version=v4.03
Sequence

ATGGTTGTTCTAGCGGCTTCCATAATTTCTAAATCTGGCAAAGCTCTTGTCTCGAGGCAA
TTTGTTGATATGTCTCGTATAAGAATTGAAGGATATCTTGCAGCTTTTCCTAAATTGGTT
GGTATAGGAAAGCAACATACATATATTGAGACTGAAAATGTGCGATATGTTTATCAGCCG
ATAGAATCTCTGTACTTGCTCCTTGTGACCAACAAACAGAGCAACATTCTTGAAGATTTG
GAGACACTGAGGCTGCTGTCTAAACTAGTGCCTGAATATTCTTATTCACTAGATGAGGAG
GGAATTGGCAGGACAGCTTTTGAGCTTATTTTTGCATTTGATGAAGTGATTTCTCTTGGG
CACAAGGAAAATGTTACAGTTACACAAGTCAAGCAGTACTGTGAAATGGAGAGTCATGAG
GAGAGATTACACAAGTTAGTCTTACAGAACAAGATAAATGAAACTAAGGATGTCATGAAG
CGTAAAGCCAGTGAGATTGACAAAAGCAAGATTGAGAGGAATAGAGGTGACAAAGGAGGT
TTCATGTCACTGCAATCCATGGGTTCTGGAAGAATCGATACTGGCTTTGGCAGCGACTCA
GGCATATCCAACACAGGAGGCAGTGGTTTTGGTAGTGGTTCTGGATTTGGTCTAACCCCT
GAAGTGGACACATTTTCCACCAAATCCAAGGGTCGTCCAGCTGCATCTGCTACTGCTCCA
CCGAAAGGTCTCGGTATGCAGCTGGGTAAAACACAGAAGACCAACCAATTTCTGGAATCC
CTAAAAGCTGAGGGTGAGGTAATTGTCGAGGATGTGAGGCCAAGCGTTGGTCAGGCCAAA
CCAGCTGCTGCTCCACTAACTGATCCCGTCACATTGACTGTTGAAGAGAAGATAAATGTA
ACACTAAAGCGTGATGGTGGTGTCAGCAATTTTGTCGTCCAGGGTACTTTGTCTCTCCAA
ATTCTGAACCAAGAAGATGCTTTTATCCAAGTGCAGATTGAAACCAGTGGAAATCCAGCA
ATCCTCTTCAAAGCACACCCAAACATGAACAAGGAGTTGTTTGCAAATGAAAATATTCTG
GGCCTTAAAGATCCCAATAGGCCATTTCCCACAGGGCAAGGTGGTGATGGTGTTAGTCTT
TTGAGGTGGAGAATGCAAAGCACAGATGAGTCAATTTTGCCTTTGACAATTAACTGCTGG
CCTTCAGTTTCTGGAAGTGAAACCTATGTGAATATCGAGTATGAAACCCCCGCACAGATT
GATCTACAAAATGTTGTAATTTCTGTACCCCTTCCAGCTCTCAGGGAGGCTCCAAATGTA
CAACAGATAGATGGAGAGTGGAGGTACGATTCCAGAAATTCTGTTTTGGAGTGGTCTGTT
CTTCTCATTGACAATTCGAACCGCAGTGGAGCACTAGAATTTGTTGTTCCAGCAGCTGAT
CCATCAGCCTTCTTTCCAATTTCTGCACAGTTTACTTCCTCAAGAACCTTCAGTGACGTG
AAGGTTGTCAACGTGCTGCCTCTAAAAGGTGGGGCTACTCCCAAGCATGCTCAAAGAACA
CTGCTGGCCACGGAGACTTACCAAGTTGTGTGA