Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064089
CDS Infomation

pacid=37436816 polypeptide=PGSC0003DMP400043187 locus=PGSC0003DMG400024905 ID=PGSC0003DMT400064089.v4.03 annot-version=v4.03
Sequence

ATGGCACTCTATGCCATACTCCTCCGCTCTCTCCGCCGTTCCTCCGCCACCGCCGCGGTC
TTCAGAACTCAAATCACAACATCCGTTCACAATCCTCAAAACCCTAATTTCCTTCTACCT
CAGCGATCATTTGCTTTTTCATCTGCAGAAGAAGCCGCCGCTGAACGGAGGCGTCGGAAG
CGGCGGCTTCGTATTGAACCACCAATCAACGCCCTCCGCCGTGATCCACTCCCCAGGGGA
CCGCCTTCTCCCGATGATCCTCGATCCCGTCTTCCTGATACCACCTCAGCATTGGTGGGC
CCTCGGCTTAACCTTCACAATCGCGTTCAATCTCTTATCCGTGCTGGTGATTTGGACTCT
GCAGCTGCCGTTGCTCGTCACGCCGTTTTCTCAAACACACGGCCGACTGTATTCACATGT
AATGCTATCATCGGTGCTATGTATCGGTCCGGACGGTATAATGATGCTAAGGCACTGTTT
CAGTACTTTTTCAATCAGTATAATATTATTCCGAACGTTGTTTCATACAATCATGTAATT
GTGTCACATTGTGAAGCTGGTGAGGTTGATGAAGGCTTGAAAGTATACAGTCATATTATT
GAAAATGCGCCTTTTAGTCCGTCTGCTGTGACATATCGCCATCTTACCAAGGGATTAATT
GATTCTGACCGTATAGCTGAAGCTGTGGATTTGCTTAGGGAAATGCTTAATAAAGGACAT
GGTGCGGATTCTTTAGTTTATAATAATTTGATATTGGGATTCTTGAATTTGGGTAATTTA
GAGAAAGCGAATGAACTGTTTGATGAGTTGAAAGAAAGGTGCACTGTTTATGATGGGGTG
GTGAATGCTACTTTTATGGATTGGTTTTTCAAGCAGGGGAAGGTAAAAGAGGCTATGGAA
TCATATCGATCACTTCTTGATAAGAAGTATAGGATGGTTCCTGCAACTTGTAATGTGTTG
TTGGAGGTGTTGTTGAGGCATGGGAGGGAAACTGAGGCGTGGGCATTGTTTGATGCAATG
TTGGATGATCACACGCCACCAACATTCCAGGCTGTGAATTCTGACACTTTTAATTTAATA
GTGAATGAGTGTTTTAGGCTAGGGAAGGTTTCAGAGGCATTGGAGACCTTCAAGAAGGTG
GGGAAGGGCCTCAAGACCAGACCTTTTGCAATGGACGTTGCAGGTTACAATAATATGATA
ACCAAACTTTCTGAGCTTGAAATGATGGAGGAAGCAGAAAAATATTATATGGAATTGTGT
AACAAGTCATTGAGCCCAGATGTCACAACTTATAGGACAATGATTGAGGCATATGTGAAG
ATGGATAATGTCGAAGGCACACTGGAGAAGTACACAAAGATGGTGGAGGCAGGGCTGAGA
GTCATTCCAGTCTATGCTGAAAAGTGGTTTAATTTCTTGATTGAGAAAGGCAAGGTTGCA
GAGTGCGTGCCTATTCTCACCAAGATGGGTGAGAGAGAACCAAAACCTGATGTGACAACA
TATGATATTGTGATTAGGGCACTCTGTGGGGAAGGTAATTATGATGCAAGTTCCAATTTA
GTTATTCAGACCATAAACTATGGTGTTGGTCTCACCAGTTCCCTCAGAGAGTTCCTGTTA
GAAAGTTTTGGTAACCAAGGTCGTCGTGAGGAGATTGAAAGAGTTTTTGCTACTAAACCT
ACTTACATTCCACCTTCTACACCACCTCGAGGACAAGTTCCATGGCTTTCACAATTGCCT
AGACAATTACCAGGAACTTCTCGTGCTGCAGGACAACAGACACCACCCGCTTCTTTATCA
TCACAAGTGCAAGGTCGGCCTTCAGCTCTTAATTCAACGTGGCAACAAAATTCACCTCCC
TCATTCGTTGGAGGACAGCAACAAGCTTCATCACCTTCTTTCATTGGAGGACAAGGATCA
TCACAAATGCAAGGCCAGCAGTCAGCACCTAACCCAAGGTGGCAACAAGCTTCACCACCA
TCTTTTGTTGCTGGACAAGGATCACATCAACTGCAAGGCCAGCAGGCAGATCCTAATCTA
AGGTGGCAACAAGCTTCACCACCCACTTTTGTTGCTGGACAAGGATCGCATCAAATGCAA
GGCCAGCAGTCAGCACCTAATCCAAGGTGGCAACAAGCTTCACCGCCGTCTTATACTGCT
GGACAAGGATCACAGCAAATGCAAGGCCAGCAGTCAGAACCTAATCCAAGGTGGCAACAA
GCTTCACCACCCTCTTTTGTTGCTGGACAAGGATCACATCAAATGCAAGGCCAGCAGTCA
GAACCTAATCCAAGGTGGCAACAAGCTTCACCACCCTCTTTTGTTGCTGGACAAGGATCA
CATCAAATGCAAGGCCAGCAGTCAGAACCTAATCCAAGGTGGCAACAAGCTTCACCACCC
TCTTTTGTTGCTGGACAAGGATCACATCAAATGCAAGGCCAGCAGTCGGCACCTAATCCA
AGGTGGCAACAAGCTTCACCACCCTCTTTTATTGCCGGACAAGTACCACAGCAAATGCAA
GGTCAGCCATCAACATTTGCAAGAAATTCGCATCAGGCATCACCTTCTTTTATTCAACAA
GGAGCTTCACCACCGTCTTTCATGGCTGGACAAGGATCACAGCAGATGCAAGGTCAGCCA
TCAGCTTTTGCAAGAAACGTGCAACAAGCATCACAACCTTCTTTCGTGCCCCAAGATGCT
TCATCGCACTCTTTCATGGCTGGACGATCACAGCAAATGCAAGGTCAGCCATCAGGTTTC
ACACACGTTTCACAATGGTCATCACCACCCACTTATATGGCAGGACAAGGAGGACAGCAT
CAAAATCAAGGTCCGCCATCAGGTTTCACACAAACTCCTTATAAGGAGGCATCACCTTAT
TCCATGGATGGACAAAGAGCCCATTCAATGCAAGGTCTGACATCAGGACCTGTTCATACT
CCACTAAATGAAATCTCACACACATCCCAATCAGTTAGAGGTCCAGCATCAGCTTTTGCA
CACGTACCTGGGCAATATGTAAGACATCAAGCAACAGAAAAGGCCTCATCCCAAGGGGAC
AATATTGAGCAATACCAATACCCCGAAGTGGCACGCCAAGGGAGAATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400043187
PEP Infomation

pacid=37436816 transcript=PGSC0003DMT400064089 locus=PGSC0003DMG400024905 ID=PGSC0003DMT400064089.v4.03 annot-version=v4.03
Sequence

MALYAILLRSLRRSSATAAVFRTQITTSVHNPQNPNFLLPQRSFAFSSAEEAAAERRRRK
RRLRIEPPINALRRDPLPRGPPSPDDPRSRLPDTTSALVGPRLNLHNRVQSLIRAGDLDS
AAAVARHAVFSNTRPTVFTCNAIIGAMYRSGRYNDAKALFQYFFNQYNIIPNVVSYNHVI
VSHCEAGEVDEGLKVYSHIIENAPFSPSAVTYRHLTKGLIDSDRIAEAVDLLREMLNKGH
GADSLVYNNLILGFLNLGNLEKANELFDELKERCTVYDGVVNATFMDWFFKQGKVKEAME
SYRSLLDKKYRMVPATCNVLLEVLLRHGRETEAWALFDAMLDDHTPPTFQAVNSDTFNLI
VNECFRLGKVSEALETFKKVGKGLKTRPFAMDVAGYNNMITKLSELEMMEEAEKYYMELC
NKSLSPDVTTYRTMIEAYVKMDNVEGTLEKYTKMVEAGLRVIPVYAEKWFNFLIEKGKVA
ECVPILTKMGEREPKPDVTTYDIVIRALCGEGNYDASSNLVIQTINYGVGLTSSLREFLL
ESFGNQGRREEIERVFATKPTYIPPSTPPRGQVPWLSQLPRQLPGTSRAAGQQTPPASLS
SQVQGRPSALNSTWQQNSPPSFVGGQQQASSPSFIGGQGSSQMQGQQSAPNPRWQQASPP
SFVAGQGSHQLQGQQADPNLRWQQASPPTFVAGQGSHQMQGQQSAPNPRWQQASPPSYTA
GQGSQQMQGQQSEPNPRWQQASPPSFVAGQGSHQMQGQQSEPNPRWQQASPPSFVAGQGS
HQMQGQQSEPNPRWQQASPPSFVAGQGSHQMQGQQSAPNPRWQQASPPSFIAGQVPQQMQ
GQPSTFARNSHQASPSFIQQGASPPSFMAGQGSQQMQGQPSAFARNVQQASQPSFVPQDA
SSHSFMAGRSQQMQGQPSGFTHVSQWSSPPTYMAGQGGQHQNQGPPSGFTQTPYKEASPY
SMDGQRAHSMQGLTSGPVHTPLNEISHTSQSVRGPASAFAHVPGQYVRHQATEKASSQGD
NIEQYQYPEVARQGRM*

Transcript Sequence

Transcript ID

PGSC0003DMT400064089
Transcript Infomation

pacid=37436816 locus=PGSC0003DMG400024905 ID=PGSC0003DMT400064089.v4.03 annot-version=v4.03
Sequence

ATGGCACTCTATGCCATACTCCTCCGCTCTCTCCGCCGTTCCTCCGCCACCGCCGCGGTC
TTCAGAACTCAAATCACAACATCCGTTCACAATCCTCAAAACCCTAATTTCCTTCTACCT
CAGCGATCATTTGCTTTTTCATCTGCAGAAGAAGCCGCCGCTGAACGGAGGCGTCGGAAG
CGGCGGCTTCGTATTGAACCACCAATCAACGCCCTCCGCCGTGATCCACTCCCCAGGGGA
CCGCCTTCTCCCGATGATCCTCGATCCCGTCTTCCTGATACCACCTCAGCATTGGTGGGC
CCTCGGCTTAACCTTCACAATCGCGTTCAATCTCTTATCCGTGCTGGTGATTTGGACTCT
GCAGCTGCCGTTGCTCGTCACGCCGTTTTCTCAAACACACGGCCGACTGTATTCACATGT
AATGCTATCATCGGTGCTATGTATCGGTCCGGACGGTATAATGATGCTAAGGCACTGTTT
CAGTACTTTTTCAATCAGTATAATATTATTCCGAACGTTGTTTCATACAATCATGTAATT
GTGTCACATTGTGAAGCTGGTGAGGTTGATGAAGGCTTGAAAGTATACAGTCATATTATT
GAAAATGCGCCTTTTAGTCCGTCTGCTGTGACATATCGCCATCTTACCAAGGGATTAATT
GATTCTGACCGTATAGCTGAAGCTGTGGATTTGCTTAGGGAAATGCTTAATAAAGGACAT
GGTGCGGATTCTTTAGTTTATAATAATTTGATATTGGGATTCTTGAATTTGGGTAATTTA
GAGAAAGCGAATGAACTGTTTGATGAGTTGAAAGAAAGGTGCACTGTTTATGATGGGGTG
GTGAATGCTACTTTTATGGATTGGTTTTTCAAGCAGGGGAAGGTAAAAGAGGCTATGGAA
TCATATCGATCACTTCTTGATAAGAAGTATAGGATGGTTCCTGCAACTTGTAATGTGTTG
TTGGAGGTGTTGTTGAGGCATGGGAGGGAAACTGAGGCGTGGGCATTGTTTGATGCAATG
TTGGATGATCACACGCCACCAACATTCCAGGCTGTGAATTCTGACACTTTTAATTTAATA
GTGAATGAGTGTTTTAGGCTAGGGAAGGTTTCAGAGGCATTGGAGACCTTCAAGAAGGTG
GGGAAGGGCCTCAAGACCAGACCTTTTGCAATGGACGTTGCAGGTTACAATAATATGATA
ACCAAACTTTCTGAGCTTGAAATGATGGAGGAAGCAGAAAAATATTATATGGAATTGTGT
AACAAGTCATTGAGCCCAGATGTCACAACTTATAGGACAATGATTGAGGCATATGTGAAG
ATGGATAATGTCGAAGGCACACTGGAGAAGTACACAAAGATGGTGGAGGCAGGGCTGAGA
GTCATTCCAGTCTATGCTGAAAAGTGGTTTAATTTCTTGATTGAGAAAGGCAAGGTTGCA
GAGTGCGTGCCTATTCTCACCAAGATGGGTGAGAGAGAACCAAAACCTGATGTGACAACA
TATGATATTGTGATTAGGGCACTCTGTGGGGAAGGTAATTATGATGCAAGTTCCAATTTA
GTTATTCAGACCATAAACTATGGTGTTGGTCTCACCAGTTCCCTCAGAGAGTTCCTGTTA
GAAAGTTTTGGTAACCAAGGTCGTCGTGAGGAGATTGAAAGAGTTTTTGCTACTAAACCT
ACTTACATTCCACCTTCTACACCACCTCGAGGACAAGTTCCATGGCTTTCACAATTGCCT
AGACAATTACCAGGAACTTCTCGTGCTGCAGGACAACAGACACCACCCGCTTCTTTATCA
TCACAAGTGCAAGGTCGGCCTTCAGCTCTTAATTCAACGTGGCAACAAAATTCACCTCCC
TCATTCGTTGGAGGACAGCAACAAGCTTCATCACCTTCTTTCATTGGAGGACAAGGATCA
TCACAAATGCAAGGCCAGCAGTCAGCACCTAACCCAAGGTGGCAACAAGCTTCACCACCA
TCTTTTGTTGCTGGACAAGGATCACATCAACTGCAAGGCCAGCAGGCAGATCCTAATCTA
AGGTGGCAACAAGCTTCACCACCCACTTTTGTTGCTGGACAAGGATCGCATCAAATGCAA
GGCCAGCAGTCAGCACCTAATCCAAGGTGGCAACAAGCTTCACCGCCGTCTTATACTGCT
GGACAAGGATCACAGCAAATGCAAGGCCAGCAGTCAGAACCTAATCCAAGGTGGCAACAA
GCTTCACCACCCTCTTTTGTTGCTGGACAAGGATCACATCAAATGCAAGGCCAGCAGTCA
GAACCTAATCCAAGGTGGCAACAAGCTTCACCACCCTCTTTTGTTGCTGGACAAGGATCA
CATCAAATGCAAGGCCAGCAGTCAGAACCTAATCCAAGGTGGCAACAAGCTTCACCACCC
TCTTTTGTTGCTGGACAAGGATCACATCAAATGCAAGGCCAGCAGTCGGCACCTAATCCA
AGGTGGCAACAAGCTTCACCACCCTCTTTTATTGCCGGACAAGTACCACAGCAAATGCAA
GGTCAGCCATCAACATTTGCAAGAAATTCGCATCAGGCATCACCTTCTTTTATTCAACAA
GGAGCTTCACCACCGTCTTTCATGGCTGGACAAGGATCACAGCAGATGCAAGGTCAGCCA
TCAGCTTTTGCAAGAAACGTGCAACAAGCATCACAACCTTCTTTCGTGCCCCAAGATGCT
TCATCGCACTCTTTCATGGCTGGACGATCACAGCAAATGCAAGGTCAGCCATCAGGTTTC
ACACACGTTTCACAATGGTCATCACCACCCACTTATATGGCAGGACAAGGAGGACAGCAT
CAAAATCAAGGTCCGCCATCAGGTTTCACACAAACTCCTTATAAGGAGGCATCACCTTAT
TCCATGGATGGACAAAGAGCCCATTCAATGCAAGGTCTGACATCAGGACCTGTTCATACT
CCACTAAATGAAATCTCACACACATCCCAATCAGTTAGAGGTCCAGCATCAGCTTTTGCA
CACGTACCTGGGCAATATGTAAGACATCAAGCAACAGAAAAGGCCTCATCCCAAGGGGAC
AATATTGAGCAATACCAATACCCCGAAGTGGCACGCCAAGGGAGAATGTAA