Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064041
CDS Infomation

pacid=37439607 polypeptide=PGSC0003DMP400043152 locus=PGSC0003DMG400024891 ID=PGSC0003DMT400064041.v4.03 annot-version=v4.03
Sequence

ATGGCTGGTGAGAAGATTATAGAAAAACCTGAAGCTGTTGCTCCGGGACTGAAATCTGAT
CCCTCTAACAAACTGATTGAGAAGGATTTGGTTTCAAAAAAAGATGGAAAAGCTTCTGAC
TCGGTGTCTTCCTTGGGAGCTGTGACTGGCATCAAGGGTGGAATTGATCAACCACCTGCT
GCAGAGCAAGGTGCTTATTATCCACCTACTAGCTATTGCGATTACTACTACCCAGGATAT
AATGGGACTTATAATCAGTTAGATGAGCAAGCTTACTTTAATGCGGGTGTTCAGTCAGAT
AATGGTTCCCTTCTCTACTATATGCCTGGCTATAATCCTTACAGTGCTGGATTTGTGGGA
GGCGACGGGAAGCAGCCCTATCCTTCGTCTGGATATCTTCAGCAACCTGTCTCATATGGT
TCAGATTCCATGCCATGTTATACATGGGGCTCGCCATACTGTGCTGATATCACCAATAGT
GCTGCTCCCAAACCCGGGAACGTTAAATCAACTTTTGGACGAAATGGTTCAGTCAAGTCA
AATGGTTTTAATTCCACAAAAACAAATAGTTCTTTCTCAAGCAAAAGCTCGACTGTACTT
TTTAACCCAAAGAGTCGACCATCTACTGCCATGTCAAATCCGCCAAAGTCTGTCCATCAA
GCTCAGCCTTTCAATCCAGTGAACAAGTTTCAGTCCGATGTCCAGTCTGGAGGCCTTATG
AAGGGGTTTCATCTGGTTGGGGACTACCCATCATACACCAGTCAAAATCAAGGTTTTTTC
ATGCCTTATGATCCCATCAACTGTCAAACAAACAGTAGAATGTGGAATGGAAACTACAGA
ATTAAACCACGCGGAAATTTCACCAGAAATGGTGTGTTTGAGGCAACAAATGAGTTACCT
CGTGGTCCCCGCGCCAACGGCAGAAGCGTCCCTTCAAAACCATCTGCTGAGGAGGATCAG
CTTGTGCCAACTGTTCAGAGGGAGAAGTATAACAAAGAGGATTTTAAGACTCAGTATGAT
AATGCAAAATTTTACATTATCAAGTCATACAGTGAAGATGATATTCACAAGTGTGTCAAA
TATGATGTCTGGTCAAGTACTCCAAATGGTAACAAGAAATTGGACACTGCCTTCGTTGAA
GCTGAGGCTAAATCAAGTGGAACTGGTTCAAGCTGTCCAGTGTTCCTCTTCTTTTCTGTA
AATGGAAGTGGACAGTTTTTAGGTGTAGCTGAGATGGTTGGGCAGGTTGACTTCAACAGA
AACATGGACTTTTGGCAGCTTGATAAGTGGAGTGGGTTCTTCCCACTGAAGTGGCACATA
GTTAAAGATGTCCCTAATACACAGTTCAGGCACATCATCCTTGAAAACAATGATAATAGA
CCTGTAACCTATAGCAGAGATACTCAGGAGATTGGATTGAAGGAAGGTTTGGAAATGCTT
AACATACTTAAGAATTACTCAGAGAAGACATCTATATTGGATGATTTCAATTTCTATGAG
AAGCGTGAGAAAGTGCTCAAGGCTAAAAGGAGTTCAAAACCAGCTATTCAAGCTGATGTA
TACGAGAAAGCTGATTCTCTTAAGCAATTCAAAGGAGGAGACAAGGTACTTGAGGAGGAG
CTGAAGACCAACTCTGCTGATCCAACTGCACCTCTCATTTCTCTCACCAAAAACCTATCG
ATTAATTCAAGGCCATTCAAAAGCAGTGTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400043152
PEP Infomation

pacid=37439607 transcript=PGSC0003DMT400064041 locus=PGSC0003DMG400024891 ID=PGSC0003DMT400064041.v4.03 annot-version=v4.03
Sequence

MAGEKIIEKPEAVAPGLKSDPSNKLIEKDLVSKKDGKASDSVSSLGAVTGIKGGIDQPPA
AEQGAYYPPTSYCDYYYPGYNGTYNQLDEQAYFNAGVQSDNGSLLYYMPGYNPYSAGFVG
GDGKQPYPSSGYLQQPVSYGSDSMPCYTWGSPYCADITNSAAPKPGNVKSTFGRNGSVKS
NGFNSTKTNSSFSSKSSTVLFNPKSRPSTAMSNPPKSVHQAQPFNPVNKFQSDVQSGGLM
KGFHLVGDYPSYTSQNQGFFMPYDPINCQTNSRMWNGNYRIKPRGNFTRNGVFEATNELP
RGPRANGRSVPSKPSAEEDQLVPTVQREKYNKEDFKTQYDNAKFYIIKSYSEDDIHKCVK
YDVWSSTPNGNKKLDTAFVEAEAKSSGTGSSCPVFLFFSVNGSGQFLGVAEMVGQVDFNR
NMDFWQLDKWSGFFPLKWHIVKDVPNTQFRHIILENNDNRPVTYSRDTQEIGLKEGLEML
NILKNYSEKTSILDDFNFYEKREKVLKAKRSSKPAIQADVYEKADSLKQFKGGDKVLEEE
LKTNSADPTAPLISLTKNLSINSRPFKSSV*

Transcript Sequence

Transcript ID

PGSC0003DMT400064041
Transcript Infomation

pacid=37439607 locus=PGSC0003DMG400024891 ID=PGSC0003DMT400064041.v4.03 annot-version=v4.03
Sequence

ATGGCTGGTGAGAAGATTATAGAAAAACCTGAAGCTGTTGCTCCGGGACTGAAATCTGAT
CCCTCTAACAAACTGATTGAGAAGGATTTGGTTTCAAAAAAAGATGGAAAAGCTTCTGAC
TCGGTGTCTTCCTTGGGAGCTGTGACTGGCATCAAGGGTGGAATTGATCAACCACCTGCT
GCAGAGCAAGGTGCTTATTATCCACCTACTAGCTATTGCGATTACTACTACCCAGGATAT
AATGGGACTTATAATCAGTTAGATGAGCAAGCTTACTTTAATGCGGGTGTTCAGTCAGAT
AATGGTTCCCTTCTCTACTATATGCCTGGCTATAATCCTTACAGTGCTGGATTTGTGGGA
GGCGACGGGAAGCAGCCCTATCCTTCGTCTGGATATCTTCAGCAACCTGTCTCATATGGT
TCAGATTCCATGCCATGTTATACATGGGGCTCGCCATACTGTGCTGATATCACCAATAGT
GCTGCTCCCAAACCCGGGAACGTTAAATCAACTTTTGGACGAAATGGTTCAGTCAAGTCA
AATGGTTTTAATTCCACAAAAACAAATAGTTCTTTCTCAAGCAAAAGCTCGACTGTACTT
TTTAACCCAAAGAGTCGACCATCTACTGCCATGTCAAATCCGCCAAAGTCTGTCCATCAA
GCTCAGCCTTTCAATCCAGTGAACAAGTTTCAGTCCGATGTCCAGTCTGGAGGCCTTATG
AAGGGGTTTCATCTGGTTGGGGACTACCCATCATACACCAGTCAAAATCAAGGTTTTTTC
ATGCCTTATGATCCCATCAACTGTCAAACAAACAGTAGAATGTGGAATGGAAACTACAGA
ATTAAACCACGCGGAAATTTCACCAGAAATGGTGTGTTTGAGGCAACAAATGAGTTACCT
CGTGGTCCCCGCGCCAACGGCAGAAGCGTCCCTTCAAAACCATCTGCTGAGGAGGATCAG
CTTGTGCCAACTGTTCAGAGGGAGAAGTATAACAAAGAGGATTTTAAGACTCAGTATGAT
AATGCAAAATTTTACATTATCAAGTCATACAGTGAAGATGATATTCACAAGTGTGTCAAA
TATGATGTCTGGTCAAGTACTCCAAATGGTAACAAGAAATTGGACACTGCCTTCGTTGAA
GCTGAGGCTAAATCAAGTGGAACTGGTTCAAGCTGTCCAGTGTTCCTCTTCTTTTCTGTA
AATGGAAGTGGACAGTTTTTAGGTGTAGCTGAGATGGTTGGGCAGGTTGACTTCAACAGA
AACATGGACTTTTGGCAGCTTGATAAGTGGAGTGGGTTCTTCCCACTGAAGTGGCACATA
GTTAAAGATGTCCCTAATACACAGTTCAGGCACATCATCCTTGAAAACAATGATAATAGA
CCTGTAACCTATAGCAGAGATACTCAGGAGATTGGATTGAAGGAAGGTTTGGAAATGCTT
AACATACTTAAGAATTACTCAGAGAAGACATCTATATTGGATGATTTCAATTTCTATGAG
AAGCGTGAGAAAGTGCTCAAGGCTAAAAGGAGTTCAAAACCAGCTATTCAAGCTGATGTA
TACGAGAAAGCTGATTCTCTTAAGCAATTCAAAGGAGGAGACAAGGTACTTGAGGAGGAG
CTGAAGACCAACTCTGCTGATCCAACTGCACCTCTCATTTCTCTCACCAAAAACCTATCG
ATTAATTCAAGGCCATTCAAAAGCAGTGTCTGA