Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064034
CDS Infomation

pacid=37439498 polypeptide=PGSC0003DMP400043147 locus=PGSC0003DMG400024889 ID=PGSC0003DMT400064034.v4.03 annot-version=v4.03
Sequence

ATGGCGTTGAAGTTACCTGCTGCTGAAGCAGCTAAGGTTGCGATTCAGTCTATAGGATGT
GGATATGATATATCCTTGGATTTGAGGCTCAAGTATTGTAAAGGTCATCCATCTAATAGT
CGTTTAATTGAAATTGATGAAAATGAGGGTCGGGAGGTTGTGCTTCCTGGTGGAATTTCA
ATACCTAATGTGTCAAAATCTATCAAATGTGATAAAGGAGAACACACACGGTTTCGCTCT
GATGTTCTTTCTTTCCAGCAGATGTCAGAGCAGTTCAATCAGGAAGTATCCGTGAATGGT
AAAATTCCTTCAGGGCTCTTCAATACTATGTTTGAGTTTTCTGGTTCTTGGCAGAAGGAT
GCTGCATACACTAAATCCCTCGCTTTTGATGGTGTGTTCATCACGTTGTACTCTGTTGCT
CTAGAAAAATCTCAAATGGTGCTGTGTGATTATGTTAAAAAGGAAGTTCCATCAACATGG
GATCCTGCAGCATTAGCAAGGTTTATTGAAAAATTTGGTACTCATGTCATTGTTGGTATA
AAGATGGGGGGAAAAGATGTAATATATATGAAACAACAGCACTCCTCATCGCTTCTGCCT
GCTGACGTGCAAAAACGTTTGAAGACAATGGCAGATAAGAGGTTTTCAGGTGCAAATGGA
CAAGGCGGAATAGAATCGCAGCAGGCAAATCAGAATGAGAAGTTTGAAATCAGGGAGCAC
CGACTGAGGTTCGCCGATCCCAATATATCAGGTTCATATGCACATAAGGAGGATACTGTT
TGTATTTGCAAGAGGAGAGGTGGAAGTGATAGCAGAGGCCTGATGCATAATCAGTGGTTA
CAAAGTGTTGATCAGGAGCCTGATGTGATCTCAATGTCCTTCATTCCTGTAACTTCACTG
TTGAATGGCATCTCAGGAAGTGGATTTTTAAGTCATGCTATAAATCTGTACTTACGCTAT
AAACCACCAATTGAAGAGCTTCACCAGTTTTTGGAATTTCAGCTGCCAAGGCAATGGGCA
CCAGTATTCGGTGATCTTCCGCTTGGTCCACAGAGAAGGCATTTAAGTTTTCCGTCTTTG
CAGTTCAGTTTACTGGGTCCCAGGCTTTATGTGAACACCACTCCGGTTGATGTTGGCAAG
AGGCCGGTGACTGGACTTCGTTTGTACCTTGAAGGTAGAAGGAGTAACCGCTTAGCTGTC
CATTTACAGCATCTTTCATCTCTTCCTAAAGTCTTCCAACTTGAAGATGATCCAAATGGC
AATTTTCACCGAGAATCATATGATCGCAAATACTATGAAAAAGTTCAATGGAAGAACTTT
TCTCACGTCTGCACCGCACCTGTTGAATCTGATGAAGATCTTAACATAGTTACTGGAGCA
CAATTGGAATTAGGGGACTACGGGTTTAAAAAGGTCCTCTTTCTGAGGCTCCGTTTCTCG
ACTGTCATGGGAGCTACTATGGTAAAGCACGCTGAGTGGGATGGTTCTCCTGGGTTGGCT
CGCAAATCTGGCCTGATATCAACTCTCATTAGCCAGCACTTCACTTCAGTTCAGAAGCCA
CCTCCGCGGCCAGATGATGTGAACATAAATTCTGCCATTTACCCTGGTGGTCCTCCAGTT
CCTGTGCAAGCCCCTAAGCTCTTGAAATTTGTCGATACTACTGAGATGACTCGAGGACCA
CAGGAACCTCCTGGTTATTGGGTTGTTTCAGGTGCAAGGCTTATGGTTGAGAAAGGAAGG
ATCTCTGTGAGGGTCAAATATTCCTTGCTAACTGTAATACAACCCGATGATGAAATATCA
GAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400043147
PEP Infomation

pacid=37439498 transcript=PGSC0003DMT400064034 locus=PGSC0003DMG400024889 ID=PGSC0003DMT400064034.v4.03 annot-version=v4.03
Sequence

MALKLPAAEAAKVAIQSIGCGYDISLDLRLKYCKGHPSNSRLIEIDENEGREVVLPGGIS
IPNVSKSIKCDKGEHTRFRSDVLSFQQMSEQFNQEVSVNGKIPSGLFNTMFEFSGSWQKD
AAYTKSLAFDGVFITLYSVALEKSQMVLCDYVKKEVPSTWDPAALARFIEKFGTHVIVGI
KMGGKDVIYMKQQHSSSLLPADVQKRLKTMADKRFSGANGQGGIESQQANQNEKFEIREH
RLRFADPNISGSYAHKEDTVCICKRRGGSDSRGLMHNQWLQSVDQEPDVISMSFIPVTSL
LNGISGSGFLSHAINLYLRYKPPIEELHQFLEFQLPRQWAPVFGDLPLGPQRRHLSFPSL
QFSLLGPRLYVNTTPVDVGKRPVTGLRLYLEGRRSNRLAVHLQHLSSLPKVFQLEDDPNG
NFHRESYDRKYYEKVQWKNFSHVCTAPVESDEDLNIVTGAQLELGDYGFKKVLFLRLRFS
TVMGATMVKHAEWDGSPGLARKSGLISTLISQHFTSVQKPPPRPDDVNINSAIYPGGPPV
PVQAPKLLKFVDTTEMTRGPQEPPGYWVVSGARLMVEKGRISVRVKYSLLTVIQPDDEIS
E*

Transcript Sequence

Transcript ID

PGSC0003DMT400064034
Transcript Infomation

pacid=37439498 locus=PGSC0003DMG400024889 ID=PGSC0003DMT400064034.v4.03 annot-version=v4.03
Sequence

ATGGCGTTGAAGTTACCTGCTGCTGAAGCAGCTAAGGTTGCGATTCAGTCTATAGGATGT
GGATATGATATATCCTTGGATTTGAGGCTCAAGTATTGTAAAGGTCATCCATCTAATAGT
CGTTTAATTGAAATTGATGAAAATGAGGGTCGGGAGGTTGTGCTTCCTGGTGGAATTTCA
ATACCTAATGTGTCAAAATCTATCAAATGTGATAAAGGAGAACACACACGGTTTCGCTCT
GATGTTCTTTCTTTCCAGCAGATGTCAGAGCAGTTCAATCAGGAAGTATCCGTGAATGGT
AAAATTCCTTCAGGGCTCTTCAATACTATGTTTGAGTTTTCTGGTTCTTGGCAGAAGGAT
GCTGCATACACTAAATCCCTCGCTTTTGATGGTGTGTTCATCACGTTGTACTCTGTTGCT
CTAGAAAAATCTCAAATGGTGCTGTGTGATTATGTTAAAAAGGAAGTTCCATCAACATGG
GATCCTGCAGCATTAGCAAGGTTTATTGAAAAATTTGGTACTCATGTCATTGTTGGTATA
AAGATGGGGGGAAAAGATGTAATATATATGAAACAACAGCACTCCTCATCGCTTCTGCCT
GCTGACGTGCAAAAACGTTTGAAGACAATGGCAGATAAGAGGTTTTCAGGTGCAAATGGA
CAAGGCGGAATAGAATCGCAGCAGGCAAATCAGAATGAGAAGTTTGAAATCAGGGAGCAC
CGACTGAGGTTCGCCGATCCCAATATATCAGGTTCATATGCACATAAGGAGGATACTGTT
TGTATTTGCAAGAGGAGAGGTGGAAGTGATAGCAGAGGCCTGATGCATAATCAGTGGTTA
CAAAGTGTTGATCAGGAGCCTGATGTGATCTCAATGTCCTTCATTCCTGTAACTTCACTG
TTGAATGGCATCTCAGGAAGTGGATTTTTAAGTCATGCTATAAATCTGTACTTACGCTAT
AAACCACCAATTGAAGAGCTTCACCAGTTTTTGGAATTTCAGCTGCCAAGGCAATGGGCA
CCAGTATTCGGTGATCTTCCGCTTGGTCCACAGAGAAGGCATTTAAGTTTTCCGTCTTTG
CAGTTCAGTTTACTGGGTCCCAGGCTTTATGTGAACACCACTCCGGTTGATGTTGGCAAG
AGGCCGGTGACTGGACTTCGTTTGTACCTTGAAGGTAGAAGGAGTAACCGCTTAGCTGTC
CATTTACAGCATCTTTCATCTCTTCCTAAAGTCTTCCAACTTGAAGATGATCCAAATGGC
AATTTTCACCGAGAATCATATGATCGCAAATACTATGAAAAAGTTCAATGGAAGAACTTT
TCTCACGTCTGCACCGCACCTGTTGAATCTGATGAAGATCTTAACATAGTTACTGGAGCA
CAATTGGAATTAGGGGACTACGGGTTTAAAAAGGTCCTCTTTCTGAGGCTCCGTTTCTCG
ACTGTCATGGGAGCTACTATGGTAAAGCACGCTGAGTGGGATGGTTCTCCTGGGTTGGCT
CGCAAATCTGGCCTGATATCAACTCTCATTAGCCAGCACTTCACTTCAGTTCAGAAGCCA
CCTCCGCGGCCAGATGATGTGAACATAAATTCTGCCATTTACCCTGGTGGTCCTCCAGTT
CCTGTGCAAGCCCCTAAGCTCTTGAAATTTGTCGATACTACTGAGATGACTCGAGGACCA
CAGGAACCTCCTGGTTATTGGGTTGTTTCAGGTGCAAGGCTTATGGTTGAGAAAGGAAGG
ATCTCTGTGAGGGTCAAATATTCCTTGCTAACTGTAATACAACCCGATGATGAAATATCA
GAGTAA