Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064031
CDS Infomation

pacid=37437147 polypeptide=PGSC0003DMP400043144 locus=PGSC0003DMG400024887 ID=PGSC0003DMT400064031.v4.03 annot-version=v4.03
Sequence

ATGGCCTCTTCAACTGCTCAAATTCACGCTCTTGGAGCTACATATTTCGCTAATTCATCT
TCTTCCACTAGAAAACCTTCAAAGTCTGTATTTTTGGGGCAAAAACTGAACAATAGAACC
CTAGCTTTTGGATTGAAGCAGAAGAAGAGCAGTTCAAGCCGGGGGAATAACGGTGGTTAT
GCACCGATGCGTGTGGTGGCGGAGAAGGTGGTGGGAATTGACTTGGGGACTACTAATTCA
GCTGTCGCTGCTATGGAAGGAGGGAAGCCTACCATAGTGACGAATGCTGAAGGACAGAGG
ACAACTCCTTCAGTGGTCGCTTACACCAAGAGTGGGGATAGGCTTGTTGGTCAAATTGCG
AAGCGTCAGGCTGTGGTGAACCCGGAGAATACCTTCTTTTCAGTGAAGAGATTCATTGGA
AGGAAGATGAATGAGGTGGATGAGGAGTCGAAGCAGGTATCGTACAATGTCATCAGAGAT
GAGAATGGAAATGTCAAGCTTGATTGCCCTGCCATTGGCAAATCATTCGCTGCTGAAGAA
ATTTCAGCTCAGGTCCTGAGGAAGTTGGTGGATGATGCATCCAAATTTTTGAATGACAAG
GTTTCCAAGGCTGTTGTCACGGTTCCTGCATACTTCAATGATTCTCAGAGGACAGCAACT
AAGGATGCAGGTCGCATTGCTGGATTAGAAGTTCTTCGGATAATTAATGAACCCACTGCT
GCCTCCTTGGCTTATGGTTTTGAAAAGAAAAGTAATGAAACAATTTTGGTTTTTGATCTT
GGAGGTGGTACTTTTGATGTATCAGTTCTTGAGGTTGGTGATGGTGTATTTGAGGTGTTG
TCAACTTCTGGTGACACCCATCTTGGTGGTGATGATTTTGACAAGAGGATTGTTGATTGG
CTTGCTGCAAGTTTCAAGAGGGATGAAGGTATTGATCTTCTAAAGGACAAACAAGCTCTT
CAACGTCTGACTGAGACTGCTGAGAAAGCTAAGATGGAACTGTCATCACTGACCCAGACT
AACATCAGTTTGCCATTCATTACAGCCACTGCTGATGGTCCTAAACACATTGAGACCACT
ATCACACGTGGGAAATTTGAAGAACTATGCTCAGATCTGCTTGACAGGCTTAAAACTCCT
GTTCAAAATTCCTTGAGAGATGCCAAGCTCTCCTTCAGCGATATTGACGAGGTCATCCTG
GTTGGTGGTTCTACACGTATTCCAGCTGTTCAGGAACTTGTTAAGAAATTGACTGGAAAG
GACCCCAATGTTACAGTTAATCCCGATGAAGTTGTTGCTCTTGGTGCTGCAGTGCAGGCT
GGAGTTTTGGCTGGAGATGTCAGCGATATTGTCCTTTTAGATGTCGCACCATTGTCCATT
GGTTTGGAAACACTTGGTGGTGTGATGACAAAGATCATTCCAAGAAATACAACATTGCCT
ACCTCCAAATCAGAAGTGTTCTCTACCGCTGCTGATGGTCAGACAAGTGTAGAAATTAAT
GTCCTCCAAGGGGAGCGAGAATTTGTTAGGGACAACAAATCTTTAGGCAGCTTCCGGCTT
GATGGAATTCCTCCTGCCCCAAGAGGGGTTCCTCAAATTGAAGTGAAATTTGACATTGAT
GCCAATGGTATTCTTTCCGTGACTGCTATTGACAAGGGTACTGGGAAGAAGCAAGACATC
ACCATTACAGGTGCCAGCACATTGCCTGGTGATGAGGTCGAGAGAATGGTTAAAGAAGCT
GAAAGATTTGCCCAGGAAGACAAGGAGAAGAGAGACGCCATAGACACAAAGAACCAGGCC
GATTCTGTTGTCTACCAGACAGAGAAGCAGTTGAAAGAACTTGGAGACAAAGTACCAGGG
CCAGTGAAAGAGAAGGTTGAGGCTAAACTTGGAGAGCTTAAAGAAGCAATCTCAGGAGGC
TCAACTCAGACCATGAAGGATGCTATGGCTGCCCTTAACCAAGAAGTAATGCAGCTTGGT
CAGTCACTCTACAACCAGCCTGGTGCTGCACCAGGTGCTGGTCCAGCACCTGGCAGTTCT
GATGGACCTTCAGAATCATCATCTGGGAAGGGACCTGATGGAGATGACGTAATTGATGCT
GATTTCACCGACAGCAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400043144
PEP Infomation

pacid=37437147 transcript=PGSC0003DMT400064031 locus=PGSC0003DMG400024887 ID=PGSC0003DMT400064031.v4.03 annot-version=v4.03
Sequence

MASSTAQIHALGATYFANSSSSTRKPSKSVFLGQKLNNRTLAFGLKQKKSSSSRGNNGGY
APMRVVAEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKSGDRLVGQIA
KRQAVVNPENTFFSVKRFIGRKMNEVDEESKQVSYNVIRDENGNVKLDCPAIGKSFAAEE
ISAQVLRKLVDDASKFLNDKVSKAVVTVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTA
ASLAYGFEKKSNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDW
LAASFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIETT
ITRGKFEELCSDLLDRLKTPVQNSLRDAKLSFSDIDEVILVGGSTRIPAVQELVKKLTGK
DPNVTVNPDEVVALGAAVQAGVLAGDVSDIVLLDVAPLSIGLETLGGVMTKIIPRNTTLP
TSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDID
ANGILSVTAIDKGTGKKQDITITGASTLPGDEVERMVKEAERFAQEDKEKRDAIDTKNQA
DSVVYQTEKQLKELGDKVPGPVKEKVEAKLGELKEAISGGSTQTMKDAMAALNQEVMQLG
QSLYNQPGAAPGAGPAPGSSDGPSESSSGKGPDGDDVIDADFTDSK*

Transcript Sequence

Transcript ID

PGSC0003DMT400064031
Transcript Infomation

pacid=37437147 locus=PGSC0003DMG400024887 ID=PGSC0003DMT400064031.v4.03 annot-version=v4.03
Sequence

ATGGCCTCTTCAACTGCTCAAATTCACGCTCTTGGAGCTACATATTTCGCTAATTCATCT
TCTTCCACTAGAAAACCTTCAAAGTCTGTATTTTTGGGGCAAAAACTGAACAATAGAACC
CTAGCTTTTGGATTGAAGCAGAAGAAGAGCAGTTCAAGCCGGGGGAATAACGGTGGTTAT
GCACCGATGCGTGTGGTGGCGGAGAAGGTGGTGGGAATTGACTTGGGGACTACTAATTCA
GCTGTCGCTGCTATGGAAGGAGGGAAGCCTACCATAGTGACGAATGCTGAAGGACAGAGG
ACAACTCCTTCAGTGGTCGCTTACACCAAGAGTGGGGATAGGCTTGTTGGTCAAATTGCG
AAGCGTCAGGCTGTGGTGAACCCGGAGAATACCTTCTTTTCAGTGAAGAGATTCATTGGA
AGGAAGATGAATGAGGTGGATGAGGAGTCGAAGCAGGTATCGTACAATGTCATCAGAGAT
GAGAATGGAAATGTCAAGCTTGATTGCCCTGCCATTGGCAAATCATTCGCTGCTGAAGAA
ATTTCAGCTCAGGTCCTGAGGAAGTTGGTGGATGATGCATCCAAATTTTTGAATGACAAG
GTTTCCAAGGCTGTTGTCACGGTTCCTGCATACTTCAATGATTCTCAGAGGACAGCAACT
AAGGATGCAGGTCGCATTGCTGGATTAGAAGTTCTTCGGATAATTAATGAACCCACTGCT
GCCTCCTTGGCTTATGGTTTTGAAAAGAAAAGTAATGAAACAATTTTGGTTTTTGATCTT
GGAGGTGGTACTTTTGATGTATCAGTTCTTGAGGTTGGTGATGGTGTATTTGAGGTGTTG
TCAACTTCTGGTGACACCCATCTTGGTGGTGATGATTTTGACAAGAGGATTGTTGATTGG
CTTGCTGCAAGTTTCAAGAGGGATGAAGGTATTGATCTTCTAAAGGACAAACAAGCTCTT
CAACGTCTGACTGAGACTGCTGAGAAAGCTAAGATGGAACTGTCATCACTGACCCAGACT
AACATCAGTTTGCCATTCATTACAGCCACTGCTGATGGTCCTAAACACATTGAGACCACT
ATCACACGTGGGAAATTTGAAGAACTATGCTCAGATCTGCTTGACAGGCTTAAAACTCCT
GTTCAAAATTCCTTGAGAGATGCCAAGCTCTCCTTCAGCGATATTGACGAGGTCATCCTG
GTTGGTGGTTCTACACGTATTCCAGCTGTTCAGGAACTTGTTAAGAAATTGACTGGAAAG
GACCCCAATGTTACAGTTAATCCCGATGAAGTTGTTGCTCTTGGTGCTGCAGTGCAGGCT
GGAGTTTTGGCTGGAGATGTCAGCGATATTGTCCTTTTAGATGTCGCACCATTGTCCATT
GGTTTGGAAACACTTGGTGGTGTGATGACAAAGATCATTCCAAGAAATACAACATTGCCT
ACCTCCAAATCAGAAGTGTTCTCTACCGCTGCTGATGGTCAGACAAGTGTAGAAATTAAT
GTCCTCCAAGGGGAGCGAGAATTTGTTAGGGACAACAAATCTTTAGGCAGCTTCCGGCTT
GATGGAATTCCTCCTGCCCCAAGAGGGGTTCCTCAAATTGAAGTGAAATTTGACATTGAT
GCCAATGGTATTCTTTCCGTGACTGCTATTGACAAGGGTACTGGGAAGAAGCAAGACATC
ACCATTACAGGTGCCAGCACATTGCCTGGTGATGAGGTCGAGAGAATGGTTAAAGAAGCT
GAAAGATTTGCCCAGGAAGACAAGGAGAAGAGAGACGCCATAGACACAAAGAACCAGGCC
GATTCTGTTGTCTACCAGACAGAGAAGCAGTTGAAAGAACTTGGAGACAAAGTACCAGGG
CCAGTGAAAGAGAAGGTTGAGGCTAAACTTGGAGAGCTTAAAGAAGCAATCTCAGGAGGC
TCAACTCAGACCATGAAGGATGCTATGGCTGCCCTTAACCAAGAAGTAATGCAGCTTGGT
CAGTCACTCTACAACCAGCCTGGTGCTGCACCAGGTGCTGGTCCAGCACCTGGCAGTTCT
GATGGACCTTCAGAATCATCATCTGGGAAGGGACCTGATGGAGATGACGTAATTGATGCT
GATTTCACCGACAGCAAGTGA