Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400064030
CDS Infomation

pacid=37436554 polypeptide=PGSC0003DMP400043143 locus=PGSC0003DMG400024886 ID=PGSC0003DMT400064030.v4.03 annot-version=v4.03
Sequence

ATGGCATGTATGTCACTCAATATAGGAGCTGCTTCTGCTTTGAAGTTTGTAAGCAATTGC
CAGAATCATTCAGTAAAGCTGTTCTCGGCTAAAGAACAACGCTGTTCCAACTACAGTTCC
AGCAATTGGGGTTGTTTCAATCTTCGAGTTCGTCGGAGTTCTTGCCGTCGTTTTGATACA
CACAAATCTTTCGCCGTTTTCAACAGCCTTCCAGTGGATAATAGCAACCCCAAGGAAAGG
GTGGTTGTCTTGGTAATTGGAGGAGGAGGGAGAGAGCATGCACTCTGTCATGCTTTGAGG
CGATCCCCTTCTTGTGACGCTATTTTCTGTGCACCGGGTAATGCTGGAATTTCCAGCTCA
GGTGATGCAACTTGCATATCAGACCTTGATGTTTTAGATAGTTCAGCTGTGATTGCTTTC
TGTCGTAAATGGGGAGTTGGGCTAGTTGTGGTTGGACCAGAGGCTCCGCTTGTTGCAGGC
CTTGCTAATGACCTTGTCAAGGAAAGAATTCCTACCTTTGGCCCCTCGTCAGAAGCAGCT
GCTTTAGAAGGTTCTAAGAACTTCATGAAGAGCTTATGTGATAAATATGGAATTCCAACT
GCAAAGTATCAAGCATTTACAGACCCATCCGCTGCAAAAGAGTACATCAAACAGGAAGGT
GCCCCAATTGTTGTTAAAGCGGATGGATTGGCTGCTGGTAAAGGAGTGATTGTTGCCATG
ACATTGGAGCAAGCATATGAGGCTGTTGATTCTATGCTTGTAGACAATGTTTTTGGTTCT
GCTGGCTCTCGAGTCGTTGTAGAGGAATATTTGGAAGGAGAGGAAGCATCATTTTTTGCT
CTAGTAGATGGTGAGCATGCCATACCTCTGGAATCTGCTCAAGACCACAAACGAGTTGGG
GATGGCGATACAGGACCAAATACTGGTGGGATGGGGGCATATTCTCCAGCTCCTGTCTTG
ACAAAGGAACTGCAATCAATGGTCATGGAGTCTATAATTTTCCCTACAGTGAAGGGAATG
GCCGAAGAAGGCTGCAAGTTTGTTGGGGTTCTGTATGCTGGGCTCATGATCGAGAAGAAA
TCTGGTTTGCCAAAGTTAATTGAGTACAATGTACGCTTTGGAGATCCAGAGTGTCAGGTA
TTGATGGTCCGGTTAGAGTCTGATTTGGTTGAAATTTTGCTGGCAGCTTGCCGTGGGAAG
CTACATGGGATGTCTTTGGACTGGTCCCCTGGATCAGCCATGGTGGTTGTAATGGCAAGT
AATGGCTATCCTGGCAACTACCAGAAAGGAACAATTATCCATAAGCTTGAGGAAGCAGAG
CAAGTTGCTCCATCTGTCAAAGTATTCCATGCTGGAACTGCTTTTGATGCAGATGGAAAT
TTCATTGCTACTGGAGGACGTGTTCTTGGAGTCACAGCAAAAGGAAAGGATCTTGAAGAG
GCTCGGGATAGAGCTTATCAAGCCGTTGAACAAATTAATTGGCCTGGAGGTTTTTATAGA
CGAGATATTGGTTGGAGAGCACTACCTCAAAAACAATATTCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400043143
PEP Infomation

pacid=37436554 transcript=PGSC0003DMT400064030 locus=PGSC0003DMG400024886 ID=PGSC0003DMT400064030.v4.03 annot-version=v4.03
Sequence

MACMSLNIGAASALKFVSNCQNHSVKLFSAKEQRCSNYSSSNWGCFNLRVRRSSCRRFDT
HKSFAVFNSLPVDNSNPKERVVVLVIGGGGREHALCHALRRSPSCDAIFCAPGNAGISSS
GDATCISDLDVLDSSAVIAFCRKWGVGLVVVGPEAPLVAGLANDLVKERIPTFGPSSEAA
ALEGSKNFMKSLCDKYGIPTAKYQAFTDPSAAKEYIKQEGAPIVVKADGLAAGKGVIVAM
TLEQAYEAVDSMLVDNVFGSAGSRVVVEEYLEGEEASFFALVDGEHAIPLESAQDHKRVG
DGDTGPNTGGMGAYSPAPVLTKELQSMVMESIIFPTVKGMAEEGCKFVGVLYAGLMIEKK
SGLPKLIEYNVRFGDPECQVLMVRLESDLVEILLAACRGKLHGMSLDWSPGSAMVVVMAS
NGYPGNYQKGTIIHKLEEAEQVAPSVKVFHAGTAFDADGNFIATGGRVLGVTAKGKDLEE
ARDRAYQAVEQINWPGGFYRRDIGWRALPQKQYS*

Transcript Sequence

Transcript ID

PGSC0003DMT400064030
Transcript Infomation

pacid=37436554 locus=PGSC0003DMG400024886 ID=PGSC0003DMT400064030.v4.03 annot-version=v4.03
Sequence

ATGGCATGTATGTCACTCAATATAGGAGCTGCTTCTGCTTTGAAGTTTGTAAGCAATTGC
CAGAATCATTCAGTAAAGCTGTTCTCGGCTAAAGAACAACGCTGTTCCAACTACAGTTCC
AGCAATTGGGGTTGTTTCAATCTTCGAGTTCGTCGGAGTTCTTGCCGTCGTTTTGATACA
CACAAATCTTTCGCCGTTTTCAACAGCCTTCCAGTGGATAATAGCAACCCCAAGGAAAGG
GTGGTTGTCTTGGTAATTGGAGGAGGAGGGAGAGAGCATGCACTCTGTCATGCTTTGAGG
CGATCCCCTTCTTGTGACGCTATTTTCTGTGCACCGGGTAATGCTGGAATTTCCAGCTCA
GGTGATGCAACTTGCATATCAGACCTTGATGTTTTAGATAGTTCAGCTGTGATTGCTTTC
TGTCGTAAATGGGGAGTTGGGCTAGTTGTGGTTGGACCAGAGGCTCCGCTTGTTGCAGGC
CTTGCTAATGACCTTGTCAAGGAAAGAATTCCTACCTTTGGCCCCTCGTCAGAAGCAGCT
GCTTTAGAAGGTTCTAAGAACTTCATGAAGAGCTTATGTGATAAATATGGAATTCCAACT
GCAAAGTATCAAGCATTTACAGACCCATCCGCTGCAAAAGAGTACATCAAACAGGAAGGT
GCCCCAATTGTTGTTAAAGCGGATGGATTGGCTGCTGGTAAAGGAGTGATTGTTGCCATG
ACATTGGAGCAAGCATATGAGGCTGTTGATTCTATGCTTGTAGACAATGTTTTTGGTTCT
GCTGGCTCTCGAGTCGTTGTAGAGGAATATTTGGAAGGAGAGGAAGCATCATTTTTTGCT
CTAGTAGATGGTGAGCATGCCATACCTCTGGAATCTGCTCAAGACCACAAACGAGTTGGG
GATGGCGATACAGGACCAAATACTGGTGGGATGGGGGCATATTCTCCAGCTCCTGTCTTG
ACAAAGGAACTGCAATCAATGGTCATGGAGTCTATAATTTTCCCTACAGTGAAGGGAATG
GCCGAAGAAGGCTGCAAGTTTGTTGGGGTTCTGTATGCTGGGCTCATGATCGAGAAGAAA
TCTGGTTTGCCAAAGTTAATTGAGTACAATGTACGCTTTGGAGATCCAGAGTGTCAGGTA
TTGATGGTCCGGTTAGAGTCTGATTTGGTTGAAATTTTGCTGGCAGCTTGCCGTGGGAAG
CTACATGGGATGTCTTTGGACTGGTCCCCTGGATCAGCCATGGTGGTTGTAATGGCAAGT
AATGGCTATCCTGGCAACTACCAGAAAGGAACAATTATCCATAAGCTTGAGGAAGCAGAG
CAAGTTGCTCCATCTGTCAAAGTATTCCATGCTGGAACTGCTTTTGATGCAGATGGAAAT
TTCATTGCTACTGGAGGACGTGTTCTTGGAGTCACAGCAAAAGGAAAGGATCTTGAAGAG
GCTCGGGATAGAGCTTATCAAGCCGTTGAACAAATTAATTGGCCTGGAGGTTTTTATAGA
CGAGATATTGGTTGGAGAGCACTACCTCAAAAACAATATTCTTAA