Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063945
CDS Infomation

pacid=37475894 polypeptide=PGSC0003DMP400043080 locus=PGSC0003DMG400024853 ID=PGSC0003DMT400063945.v4.03 annot-version=v4.03
Sequence

ATGTCTTTAGTTAGATCTCTAAGATCAATTGGAAATGGGAAGCTGTATTTTCAAAATGGT
CACGACGATAACTCTAGCTTGTCAACATCCATGTACTCCAAAAATGCACGTGGGATTATG
TATGCAACCGAGTCTAGCAGCACAGACAGTTATGATCCAAAGTATTTGCTAGAATCACCT
TCACCTTCGGAAGAACTTTTAACCACATCACCTACAGATGTCTTGGGGAATCCATTCCAC
CAGAGACATTCATCTTCTTTCCATCCATCAAGAGATTACAATCAGGCTAGTTATGATTCA
GGAGACTTTGTCAATCAAAGTCCAGATTCATCAGAATATAATGATGGAAGGGTGACAATG
AAGCTTCAAGAACTTGAAAGGGTACTTTTCGATGATAACGAAATTGAAGGAGATGATGTA
TTTACTCGTGGGGAGACTATGGACATAGATGATGAATGGTTTAACCAGATCCGAACTGAG
TTACTTCAGGAGTCTACATCTGCAGATTCTAATATCAGTAGCAGTAGTAGCTACAAGGAA
ATATCTGTATCTGCTCCTCAAACTCCAAAGCAGATGCTTTTTAGTTGTGCTGCTGCTATT
CAAGATGGACATATTGAACAAGCCTCATCTATGATTAATGAACTGAGGCAGATGGTCTCC
ATCCAGGGAGATCCTCTTGAAAGGACTGCAGCTTACATGGTAGAAGCTCTTGCAGCTCGA
ATGGCTACATCTGGCAGAGGTCTTTATAAAGCTCTAAAATGCAAAGAAGCTACCTCTTCG
GAGAGACTCTCTGCTATGCAAGTCCTCTTTGAAGTATGTCCGTACTTTAGGTTTGGTTTT
ATGGCAGCTAATGGTGCGATCCTAGAGGCTTTTAAAGATGAGAAAAGAGTTCACATCATA
GATTTTGACCTTAACCAAGGAAGTCAATATTACACTTTATTGCAGACATTGGCTAGTATG
CCTGGTAAGCCACCCCATGTGAGGCTAACTGGGGTAGACGACCCTGAATCTGTCCAACGT
GCTATTGGAGGCCTTAATGTCATTGGTCTCAGGCTTGCAGAGCTGGCCAAAGATCTTAAG
ATCTCTTTTGAGTTCCAAGCAGTGTCTTCCAACACTGGATTAGTCACCCCAGCAATGTTG
AACTGCCGTCCTGGTGAAGCTGTTTTAGTAAACTTCGCGTTCCAGCTTCATCACATGCCT
GATGAAAGTGTATCAACGGTAAACCAAAGAGACCAGCTTCTGCGGATGGTGAAGAGCTTA
AATCCAAAGCTGGTAACAGTTGTTGAGCAAGACATGAACACTAACACTGCCCCATTTCTA
CAAAGGTTTGCAGAAGTCTACAACTACTATTGTGTCGTATTCGAGTCTCTCGATGCAACT
CTTTCAAGGGATAGCCAAGAGAGGGTTAATGTAGAACGGCAATGTCTTGCACGTGATATC
ATCAACATTGTTGCCTGTGAAGGATTGGAGCGAATAGAGCGCTATGAGGTTGCAGGGAAG
TGGAGAGCTAGGATGATGATGGCTGGTTTCACTCCATCCCCAATTAGCCGAAATGTCTAT
GACTCAATCCGGAATCTTATCAAGCAATATAGCGAAAGGTACAAAGCAGAGGAGGAGGCA
GGTGCACTCTATTTCGGGTGGGAGGACAAGACCCTGACTGTTGCTTCAGCTTGGAGGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400043080
PEP Infomation

pacid=37475894 transcript=PGSC0003DMT400063945 locus=PGSC0003DMG400024853 ID=PGSC0003DMT400063945.v4.03 annot-version=v4.03
Sequence

MSLVRSLRSIGNGKLYFQNGHDDNSSLSTSMYSKNARGIMYATESSSTDSYDPKYLLESP
SPSEELLTTSPTDVLGNPFHQRHSSSFHPSRDYNQASYDSGDFVNQSPDSSEYNDGRVTM
KLQELERVLFDDNEIEGDDVFTRGETMDIDDEWFNQIRTELLQESTSADSNISSSSSYKE
ISVSAPQTPKQMLFSCAAAIQDGHIEQASSMINELRQMVSIQGDPLERTAAYMVEALAAR
MATSGRGLYKALKCKEATSSERLSAMQVLFEVCPYFRFGFMAANGAILEAFKDEKRVHII
DFDLNQGSQYYTLLQTLASMPGKPPHVRLTGVDDPESVQRAIGGLNVIGLRLAELAKDLK
ISFEFQAVSSNTGLVTPAMLNCRPGEAVLVNFAFQLHHMPDESVSTVNQRDQLLRMVKSL
NPKLVTVVEQDMNTNTAPFLQRFAEVYNYYCVVFESLDATLSRDSQERVNVERQCLARDI
INIVACEGLERIERYEVAGKWRARMMMAGFTPSPISRNVYDSIRNLIKQYSERYKAEEEA
GALYFGWEDKTLTVASAWR*

Transcript Sequence

Transcript ID

PGSC0003DMT400063945
Transcript Infomation

pacid=37475894 locus=PGSC0003DMG400024853 ID=PGSC0003DMT400063945.v4.03 annot-version=v4.03
Sequence

ATGTCTTTAGTTAGATCTCTAAGATCAATTGGAAATGGGAAGCTGTATTTTCAAAATGGT
CACGACGATAACTCTAGCTTGTCAACATCCATGTACTCCAAAAATGCACGTGGGATTATG
TATGCAACCGAGTCTAGCAGCACAGACAGTTATGATCCAAAGTATTTGCTAGAATCACCT
TCACCTTCGGAAGAACTTTTAACCACATCACCTACAGATGTCTTGGGGAATCCATTCCAC
CAGAGACATTCATCTTCTTTCCATCCATCAAGAGATTACAATCAGGCTAGTTATGATTCA
GGAGACTTTGTCAATCAAAGTCCAGATTCATCAGAATATAATGATGGAAGGGTGACAATG
AAGCTTCAAGAACTTGAAAGGGTACTTTTCGATGATAACGAAATTGAAGGAGATGATGTA
TTTACTCGTGGGGAGACTATGGACATAGATGATGAATGGTTTAACCAGATCCGAACTGAG
TTACTTCAGGAGTCTACATCTGCAGATTCTAATATCAGTAGCAGTAGTAGCTACAAGGAA
ATATCTGTATCTGCTCCTCAAACTCCAAAGCAGATGCTTTTTAGTTGTGCTGCTGCTATT
CAAGATGGACATATTGAACAAGCCTCATCTATGATTAATGAACTGAGGCAGATGGTCTCC
ATCCAGGGAGATCCTCTTGAAAGGACTGCAGCTTACATGGTAGAAGCTCTTGCAGCTCGA
ATGGCTACATCTGGCAGAGGTCTTTATAAAGCTCTAAAATGCAAAGAAGCTACCTCTTCG
GAGAGACTCTCTGCTATGCAAGTCCTCTTTGAAGTATGTCCGTACTTTAGGTTTGGTTTT
ATGGCAGCTAATGGTGCGATCCTAGAGGCTTTTAAAGATGAGAAAAGAGTTCACATCATA
GATTTTGACCTTAACCAAGGAAGTCAATATTACACTTTATTGCAGACATTGGCTAGTATG
CCTGGTAAGCCACCCCATGTGAGGCTAACTGGGGTAGACGACCCTGAATCTGTCCAACGT
GCTATTGGAGGCCTTAATGTCATTGGTCTCAGGCTTGCAGAGCTGGCCAAAGATCTTAAG
ATCTCTTTTGAGTTCCAAGCAGTGTCTTCCAACACTGGATTAGTCACCCCAGCAATGTTG
AACTGCCGTCCTGGTGAAGCTGTTTTAGTAAACTTCGCGTTCCAGCTTCATCACATGCCT
GATGAAAGTGTATCAACGGTAAACCAAAGAGACCAGCTTCTGCGGATGGTGAAGAGCTTA
AATCCAAAGCTGGTAACAGTTGTTGAGCAAGACATGAACACTAACACTGCCCCATTTCTA
CAAAGGTTTGCAGAAGTCTACAACTACTATTGTGTCGTATTCGAGTCTCTCGATGCAACT
CTTTCAAGGGATAGCCAAGAGAGGGTTAATGTAGAACGGCAATGTCTTGCACGTGATATC
ATCAACATTGTTGCCTGTGAAGGATTGGAGCGAATAGAGCGCTATGAGGTTGCAGGGAAG
TGGAGAGCTAGGATGATGATGGCTGGTTTCACTCCATCCCCAATTAGCCGAAATGTCTAT
GACTCAATCCGGAATCTTATCAAGCAATATAGCGAAAGGTACAAAGCAGAGGAGGAGGCA
GGTGCACTCTATTTCGGGTGGGAGGACAAGACCCTGACTGTTGCTTCAGCTTGGAGGTAG