Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063943
CDS Infomation

pacid=37474615 polypeptide=PGSC0003DMP400043078 locus=PGSC0003DMG400024852 ID=PGSC0003DMT400063943.v4.03 annot-version=v4.03
Sequence

ATGTCGAAGACGCTAGTTCAGCCTGTAGGCCAAAAGAGACTTACCAATGTTGCTGTTGTG
CGTCTCAAGAAGCATGGTAACCGTTTCGAAATCGCTTGTTATAAGAATAAGGTCCTTTCA
TGGCGTTCTGGCGTAGAGAAAGATGTGGATGAAGTGTTGCAGTCACATACTGTTTACACG
AATGTGTCAAAGGGTGTACTTGCAAAGTCTAAAGATTTGATTAGGGCTTTTGGTACTGAT
GATCAGACCAAAATCTGTCTGGAGATTTTGGACAAAGGAGAGCTGCAAGTTGCAGGGAAG
GAGAGGGAATCACAGTTGTCAAGTCAGTTCAGGGATATTGCTACCATAGTTATGCAGAAG
ACAATCAATCCTGAAACTCAGCATCCATACACAATTAGCATGATTGAACGTCTGATGCAT
GAAATCCATTTTGCTGTTGATCCAAATAGCAGCTCAAAGAAACAGGCATTGGAGGTCATT
CGGGAGCTTCAAAAGCATTACCCCATAAAACGTGCCCCCATGAGGTTGAGGATACATGTA
CCAGAACAAAGTAATCCTTCTGTCCTGGACAAGCTTAAGGAGTGGAATGCCTCCGTTGTG
TCGAGAGAAGAATCTGGAAGTCAGCACTCCATTATTTGTGAAATTGAGCCTAGTCTTTTC
CGGGACTGTGATGCCTTAATAAGGAATCTACAGGGCAGAGTGGAAATTCTTGCAGTCAAT
GTACATGTTGAGGGGGATACTTTCGTCGATCAGTTCGATGATCACGAGGATGATTCATCA
AGTTTAAGGAAGGATTCTACAGGTTCAGTTCTCCAGCTGAGTGAGAAAATGCAAAAGCAG
ACTATTTCTTCAGAAATCGGGAATTCTAGGGAAGAAGAAAAACTGAGCAAACCTGCAAAA
AGTGGGAGTTCTGAGGGCGAAGTAAAACTGAACAGGTGCACTACTTGTAATGCTGTTGTG
GGAGATTCAAAAGAATACAGAGAGCATTTTAAGAGTGACTGGCATAAGCATAACCTAAGG
CGTAAAACTAGGCAACTCCCTCCACTTACAGCTGAAGAATGTATGGCTGACCTGGAACTT
GGAGACTCGAAGGCTGATCTAAAAGAATATTCATTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400043078
PEP Infomation

pacid=37474615 transcript=PGSC0003DMT400063943 locus=PGSC0003DMG400024852 ID=PGSC0003DMT400063943.v4.03 annot-version=v4.03
Sequence

MSKTLVQPVGQKRLTNVAVVRLKKHGNRFEIACYKNKVLSWRSGVEKDVDEVLQSHTVYT
NVSKGVLAKSKDLIRAFGTDDQTKICLEILDKGELQVAGKERESQLSSQFRDIATIVMQK
TINPETQHPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHYPIKRAPMRLRIHV
PEQSNPSVLDKLKEWNASVVSREESGSQHSIICEIEPSLFRDCDALIRNLQGRVEILAVN
VHVEGDTFVDQFDDHEDDSSSLRKDSTGSVLQLSEKMQKQTISSEIGNSREEEKLSKPAK
SGSSEGEVKLNRCTTCNAVVGDSKEYREHFKSDWHKHNLRRKTRQLPPLTAEECMADLEL
GDSKADLKEYSF*

Transcript Sequence

Transcript ID

PGSC0003DMT400063943
Transcript Infomation

pacid=37474615 locus=PGSC0003DMG400024852 ID=PGSC0003DMT400063943.v4.03 annot-version=v4.03
Sequence

ATGTCGAAGACGCTAGTTCAGCCTGTAGGCCAAAAGAGACTTACCAATGTTGCTGTTGTG
CGTCTCAAGAAGCATGGTAACCGTTTCGAAATCGCTTGTTATAAGAATAAGGTCCTTTCA
TGGCGTTCTGGCGTAGAGAAAGATGTGGATGAAGTGTTGCAGTCACATACTGTTTACACG
AATGTGTCAAAGGGTGTACTTGCAAAGTCTAAAGATTTGATTAGGGCTTTTGGTACTGAT
GATCAGACCAAAATCTGTCTGGAGATTTTGGACAAAGGAGAGCTGCAAGTTGCAGGGAAG
GAGAGGGAATCACAGTTGTCAAGTCAGTTCAGGGATATTGCTACCATAGTTATGCAGAAG
ACAATCAATCCTGAAACTCAGCATCCATACACAATTAGCATGATTGAACGTCTGATGCAT
GAAATCCATTTTGCTGTTGATCCAAATAGCAGCTCAAAGAAACAGGCATTGGAGGTCATT
CGGGAGCTTCAAAAGCATTACCCCATAAAACGTGCCCCCATGAGGTTGAGGATACATGTA
CCAGAACAAAGTAATCCTTCTGTCCTGGACAAGCTTAAGGAGTGGAATGCCTCCGTTGTG
TCGAGAGAAGAATCTGGAAGTCAGCACTCCATTATTTGTGAAATTGAGCCTAGTCTTTTC
CGGGACTGTGATGCCTTAATAAGGAATCTACAGGGCAGAGTGGAAATTCTTGCAGTCAAT
GTACATGTTGAGGGGGATACTTTCGTCGATCAGTTCGATGATCACGAGGATGATTCATCA
AGTTTAAGGAAGGATTCTACAGGTTCAGTTCTCCAGCTGAGTGAGAAAATGCAAAAGCAG
ACTATTTCTTCAGAAATCGGGAATTCTAGGGAAGAAGAAAAACTGAGCAAACCTGCAAAA
AGTGGGAGTTCTGAGGGCGAAGTAAAACTGAACAGGTGCACTACTTGTAATGCTGTTGTG
GGAGATTCAAAAGAATACAGAGAGCATTTTAAGAGTGACTGGCATAAGCATAACCTAAGG
CGTAAAACTAGGCAACTCCCTCCACTTACAGCTGAAGAATGTATGGCTGACCTGGAACTT
GGAGACTCGAAGGCTGATCTAAAAGAATATTCATTTTGA