Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063833
CDS Infomation

pacid=37471885 polypeptide=PGSC0003DMP400043002 locus=PGSC0003DMG400024814 ID=PGSC0003DMT400063833.v4.03 annot-version=v4.03
Sequence

ATGGCAAGCATACACAGCAGCAAGACCAGACCTTTCGCTTCACACCAGACTGTAACCCCA
TGCACTCGCACCCACCAGATCGGCGCTCTAGCTCTCGTCATCATCACTTTCTTCGTCACC
AGAATCTTCGACCAGTCACTCAATTCCTCTTCCTTCTCAACCCCTACTTCTGGACAATAC
AGATCCAAGAACGACGTCGTACGGTTCTCCGATTCCGGTGGGTCCATCTTTTGGCCACAA
CGTGGGTATGGGACCCATCTTTCCCTGAAGATTTATGTGTATGATGAGAATGAAATTGAT
GGGTTAAAACACTTGTTGTATGGCCGTGATGGGAAGATTTCGCCTGATTCTTGCGTTAAA
GGACAATGGGGTACTCAGGTTAAGATACATAGGATGCTTTTGCAGTCAAGGTTCCGGACC
AGAAAGAAAGAAGAGGCGGACCTTTTCTTTGTGCCTGCTTATCCTAAGTGTGTTCGAGTG
ATGGGCGGACTGAATGACAAAGAGATTAATCAGACCTATGTGAAGGTCCTAAGTCAAATG
CCATATTTCAGGTTATCCGGTGGCCGCAACCACATATTTGTCTTCCCAAGTGGTGCTGGA
GCTCATTTATTTAAATCGTGGGTGACATACTTGAATCGGTCTATAATACTTACCCCTGAG
GGGGATCGCACAGATAAAAGAGATACTAGCGCCTTTAATACATGGAAAGATATTATCATA
CCTGGAAACATTGATGATGGGATGACTACTCATGGCTCTAGGATAGTTGAGCCTTTGCCT
TTGTCAAAGAGGAAACATTTAGCGAACTATTTAGGTCGAGCACAAGGAAAGGTGGGTCGC
CTTCGGTTGATAGAACTCTCGAAGCAGTACCCAGACAAGTTGGAATGTCCAGAATTGAAA
TTCAGTGGTCCTGACAAGCTAGGAAGGAAGGAATATTTTGAACATCTCCGCAATGCCAAG
TTCTGCCTGGCTCCACGTGGTGAATCATCATGGACGCTTCGCTTTTATGAGTCCTTCTTT
GTGGAATGTGTTCCAGTAATCCTATCGGACCAAGCAGAATTACCATTTCAGAATGTGATA
GACTATTCTCAGATATCAATCAAATGGCCATCCACTCATATAGGAACTGAACTATTGGAC
TACCTAGAATCAATACCAGATAAAGACATCGATGAAATGATAGCTAGGGGTCAAAAGATC
AGGTGCTTGTTCGCTTATACACCCGAGTCTGATTCCTGCTCTGCATTTAATGCAATTATG
TGGGAACTGCAGAGAAAAGTAAGGCAATTCCACCAGTCATCAGAAACTTTCTGGCTCCAT
AATAGAACTATAGTCAACAGAAATTTGGTGGAATTCAGCAAGTGGAAACCACCCATGCCT
CTGCCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400043002
PEP Infomation

pacid=37471885 transcript=PGSC0003DMT400063833 locus=PGSC0003DMG400024814 ID=PGSC0003DMT400063833.v4.03 annot-version=v4.03
Sequence

MASIHSSKTRPFASHQTVTPCTRTHQIGALALVIITFFVTRIFDQSLNSSSFSTPTSGQY
RSKNDVVRFSDSGGSIFWPQRGYGTHLSLKIYVYDENEIDGLKHLLYGRDGKISPDSCVK
GQWGTQVKIHRMLLQSRFRTRKKEEADLFFVPAYPKCVRVMGGLNDKEINQTYVKVLSQM
PYFRLSGGRNHIFVFPSGAGAHLFKSWVTYLNRSIILTPEGDRTDKRDTSAFNTWKDIII
PGNIDDGMTTHGSRIVEPLPLSKRKHLANYLGRAQGKVGRLRLIELSKQYPDKLECPELK
FSGPDKLGRKEYFEHLRNAKFCLAPRGESSWTLRFYESFFVECVPVILSDQAELPFQNVI
DYSQISIKWPSTHIGTELLDYLESIPDKDIDEMIARGQKIRCLFAYTPESDSCSAFNAIM
WELQRKVRQFHQSSETFWLHNRTIVNRNLVEFSKWKPPMPLP*

Transcript Sequence

Transcript ID

PGSC0003DMT400063833
Transcript Infomation

pacid=37471885 locus=PGSC0003DMG400024814 ID=PGSC0003DMT400063833.v4.03 annot-version=v4.03
Sequence

ATGGCAAGCATACACAGCAGCAAGACCAGACCTTTCGCTTCACACCAGACTGTAACCCCA
TGCACTCGCACCCACCAGATCGGCGCTCTAGCTCTCGTCATCATCACTTTCTTCGTCACC
AGAATCTTCGACCAGTCACTCAATTCCTCTTCCTTCTCAACCCCTACTTCTGGACAATAC
AGATCCAAGAACGACGTCGTACGGTTCTCCGATTCCGGTGGGTCCATCTTTTGGCCACAA
CGTGGGTATGGGACCCATCTTTCCCTGAAGATTTATGTGTATGATGAGAATGAAATTGAT
GGGTTAAAACACTTGTTGTATGGCCGTGATGGGAAGATTTCGCCTGATTCTTGCGTTAAA
GGACAATGGGGTACTCAGGTTAAGATACATAGGATGCTTTTGCAGTCAAGGTTCCGGACC
AGAAAGAAAGAAGAGGCGGACCTTTTCTTTGTGCCTGCTTATCCTAAGTGTGTTCGAGTG
ATGGGCGGACTGAATGACAAAGAGATTAATCAGACCTATGTGAAGGTCCTAAGTCAAATG
CCATATTTCAGGTTATCCGGTGGCCGCAACCACATATTTGTCTTCCCAAGTGGTGCTGGA
GCTCATTTATTTAAATCGTGGGTGACATACTTGAATCGGTCTATAATACTTACCCCTGAG
GGGGATCGCACAGATAAAAGAGATACTAGCGCCTTTAATACATGGAAAGATATTATCATA
CCTGGAAACATTGATGATGGGATGACTACTCATGGCTCTAGGATAGTTGAGCCTTTGCCT
TTGTCAAAGAGGAAACATTTAGCGAACTATTTAGGTCGAGCACAAGGAAAGGTGGGTCGC
CTTCGGTTGATAGAACTCTCGAAGCAGTACCCAGACAAGTTGGAATGTCCAGAATTGAAA
TTCAGTGGTCCTGACAAGCTAGGAAGGAAGGAATATTTTGAACATCTCCGCAATGCCAAG
TTCTGCCTGGCTCCACGTGGTGAATCATCATGGACGCTTCGCTTTTATGAGTCCTTCTTT
GTGGAATGTGTTCCAGTAATCCTATCGGACCAAGCAGAATTACCATTTCAGAATGTGATA
GACTATTCTCAGATATCAATCAAATGGCCATCCACTCATATAGGAACTGAACTATTGGAC
TACCTAGAATCAATACCAGATAAAGACATCGATGAAATGATAGCTAGGGGTCAAAAGATC
AGGTGCTTGTTCGCTTATACACCCGAGTCTGATTCCTGCTCTGCATTTAATGCAATTATG
TGGGAACTGCAGAGAAAAGTAAGGCAATTCCACCAGTCATCAGAAACTTTCTGGCTCCAT
AATAGAACTATAGTCAACAGAAATTTGGTGGAATTCAGCAAGTGGAAACCACCCATGCCT
CTGCCTTGA