Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063769
CDS Infomation

pacid=37437177 polypeptide=PGSC0003DMP400042954 locus=PGSC0003DMG400024781 ID=PGSC0003DMT400063769.v4.03 annot-version=v4.03
Sequence

ATGGATCCAAGAAAAGATGTTGTACAAAATGGTGTCAATAATCATCCTAGTTTTGTTCAA
GATTACCTTTCAAATCATGTTGTTGGAGAGGGAGATTCTTCTTCTCCTAAAGAGGAAGGG
GAAAGGGACTATTCTGATGCAATGTACAAATTCTTAAGTCAGATGCTTATGGAAGAAGAT
GATTTGGAGAATAAGCCATGTATGTTTCATGACTGCATGGCTCTCCAAGCTAAAGAGAAA
TACTTATCTGATGTACTTCATGGATCCGAAAACAACTATTCCCCACAATCTGTCATTATC
AATCCACACGAATCCTCTAGTTTTCTCAGCAACTATTCACCTGATTCTATTGAGTCGCCT
CAATGGGATCTTAATTTCGAATCCCCTGTTTCCGTGTCGACTTTATCTAATCATGACTCT
TTCTTCACTTCCTTCGGAAATGGCCATTTTGAAGGAGGAGCTGTTAATGTGTTCCGAAGT
GGCAGCAGCAGCAATTCACCCACTGGTTTGAGGGAAAAGAAAAATCGACATCGAGGAGAT
GTTGCTGCAGACCTTGCTGCAGACCAGCAGAGGAGTAACAAACAGATGGCTACATTTGTT
CATGATGAATCTGAACCATTGGAAATGTATGACAACGTGTTGCTTTGTTTAAACAATCCA
TATGTGGAACATCATAGTGCTACTAGTGTCACTTCCTACTCGCCGCCAAATGAAGCCAAA
AAAGCAAGCAAAGTTGGAAGGCCGAGAGGTGGTAGGAAGCATAGCAGCATTGTCAAGAAG
GAAATGGTGGATTTGAGGGCTCTGTTGACTCAATGTGCTCAGGCCATGGCAAGCTATGAT
AGCAGAACAGCTAATGAGCTGCTGATGCGGATAAGAGAACACTCTACACCTCATGGCGAT
GGGACGGAGAGGTTGGCTCATTATCTTGCCAATGCCCTTGAAGCACGCCTGTCCGGCACA
GGAACAGCTTTGTATACAGCGTACGCACCCAGTAGGATATCAGCTGCTAACATTTTGAAA
GCTTACAAGGCATTTATCACAGCATGTCCATTCAAGTTGCTGTCAAACATGTTCGCAAAC
AAGTATATCAGAAAGGTCATTGCTGGAGCACCAAAGATCCACATAATTGATTTTGGGATT
TTGTATGGTTTCCAATGGCCCTGTCTCATACAAGGTCTATCCATGAGGGCTGGGGGACCT
CCAGAGCTTCGCATTACTGGAATTGATCTTCCCCAGTCAGGTTTCAAGCCAGCAGGGAGG
GTTGAGGAGACAGGGCGTCGCCTGGAGAAGTACTGCAAGCGATTTAATGTCCCTTTCGTA
TTCAAAGCCATCGCGAAGAAGTGGGAAAGCATCACGCTTGAAGATCTTGAGATTCAAAGG
GATGAAGTGTTGGTAGTTAACAGTTTGTATAGGCTAGGAAACATACCTGATGAGACAGTA
GTACCAAACAGTCCAAGGGATGCTGTCCTGAATTTAATCAGGAGAATCCGTCCTGATTTG
TTCATCCATGGTGCGTTGAACGGTACTTTCAACACTCCATTTTTCGTCACACGATTCAGG
GAGGCGCTTTTTCACTTCTCCTCACTGTTCGATATGTTTGAGGCTACTATGCCCCACGAG
GATGAGGACAGAAAGCTATTCGAGGAAGAGGTTTATGCAAGAGATGCTATGAACGTGATA
GCTTGTGAAGGGACAGAGAGAGTCGAGAGACCTGAAACATACAAGCAATGGCAACTTAGA
TGCGTTAGAGCTGGATTCAAGCAGGTGCCACTTGACCAGGAGATTGTGAAGATAGTGAGG
AATAAAGTGAGGTCGGAGTACCATAGGGACTTCTCAGTTGATGAAGATGGACACTGGATG
CTGCAAGGATGGAAAGGACGCGTAATTTACGCTCTCTCTTGTTGGAAGCCTACTAAGCAG
TCTGTAAAATTAGGAGTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400042954
PEP Infomation

pacid=37437177 transcript=PGSC0003DMT400063769 locus=PGSC0003DMG400024781 ID=PGSC0003DMT400063769.v4.03 annot-version=v4.03
Sequence

MDPRKDVVQNGVNNHPSFVQDYLSNHVVGEGDSSSPKEEGERDYSDAMYKFLSQMLMEED
DLENKPCMFHDCMALQAKEKYLSDVLHGSENNYSPQSVIINPHESSSFLSNYSPDSIESP
QWDLNFESPVSVSTLSNHDSFFTSFGNGHFEGGAVNVFRSGSSSNSPTGLREKKNRHRGD
VAADLAADQQRSNKQMATFVHDESEPLEMYDNVLLCLNNPYVEHHSATSVTSYSPPNEAK
KASKVGRPRGGRKHSSIVKKEMVDLRALLTQCAQAMASYDSRTANELLMRIREHSTPHGD
GTERLAHYLANALEARLSGTGTALYTAYAPSRISAANILKAYKAFITACPFKLLSNMFAN
KYIRKVIAGAPKIHIIDFGILYGFQWPCLIQGLSMRAGGPPELRITGIDLPQSGFKPAGR
VEETGRRLEKYCKRFNVPFVFKAIAKKWESITLEDLEIQRDEVLVVNSLYRLGNIPDETV
VPNSPRDAVLNLIRRIRPDLFIHGALNGTFNTPFFVTRFREALFHFSSLFDMFEATMPHE
DEDRKLFEEEVYARDAMNVIACEGTERVERPETYKQWQLRCVRAGFKQVPLDQEIVKIVR
NKVRSEYHRDFSVDEDGHWMLQGWKGRVIYALSCWKPTKQSVKLGV*

Transcript Sequence

Transcript ID

PGSC0003DMT400063769
Transcript Infomation

pacid=37437177 locus=PGSC0003DMG400024781 ID=PGSC0003DMT400063769.v4.03 annot-version=v4.03
Sequence

ATGGATCCAAGAAAAGATGTTGTACAAAATGGTGTCAATAATCATCCTAGTTTTGTTCAA
GATTACCTTTCAAATCATGTTGTTGGAGAGGGAGATTCTTCTTCTCCTAAAGAGGAAGGG
GAAAGGGACTATTCTGATGCAATGTACAAATTCTTAAGTCAGATGCTTATGGAAGAAGAT
GATTTGGAGAATAAGCCATGTATGTTTCATGACTGCATGGCTCTCCAAGCTAAAGAGAAA
TACTTATCTGATGTACTTCATGGATCCGAAAACAACTATTCCCCACAATCTGTCATTATC
AATCCACACGAATCCTCTAGTTTTCTCAGCAACTATTCACCTGATTCTATTGAGTCGCCT
CAATGGGATCTTAATTTCGAATCCCCTGTTTCCGTGTCGACTTTATCTAATCATGACTCT
TTCTTCACTTCCTTCGGAAATGGCCATTTTGAAGGAGGAGCTGTTAATGTGTTCCGAAGT
GGCAGCAGCAGCAATTCACCCACTGGTTTGAGGGAAAAGAAAAATCGACATCGAGGAGAT
GTTGCTGCAGACCTTGCTGCAGACCAGCAGAGGAGTAACAAACAGATGGCTACATTTGTT
CATGATGAATCTGAACCATTGGAAATGTATGACAACGTGTTGCTTTGTTTAAACAATCCA
TATGTGGAACATCATAGTGCTACTAGTGTCACTTCCTACTCGCCGCCAAATGAAGCCAAA
AAAGCAAGCAAAGTTGGAAGGCCGAGAGGTGGTAGGAAGCATAGCAGCATTGTCAAGAAG
GAAATGGTGGATTTGAGGGCTCTGTTGACTCAATGTGCTCAGGCCATGGCAAGCTATGAT
AGCAGAACAGCTAATGAGCTGCTGATGCGGATAAGAGAACACTCTACACCTCATGGCGAT
GGGACGGAGAGGTTGGCTCATTATCTTGCCAATGCCCTTGAAGCACGCCTGTCCGGCACA
GGAACAGCTTTGTATACAGCGTACGCACCCAGTAGGATATCAGCTGCTAACATTTTGAAA
GCTTACAAGGCATTTATCACAGCATGTCCATTCAAGTTGCTGTCAAACATGTTCGCAAAC
AAGTATATCAGAAAGGTCATTGCTGGAGCACCAAAGATCCACATAATTGATTTTGGGATT
TTGTATGGTTTCCAATGGCCCTGTCTCATACAAGGTCTATCCATGAGGGCTGGGGGACCT
CCAGAGCTTCGCATTACTGGAATTGATCTTCCCCAGTCAGGTTTCAAGCCAGCAGGGAGG
GTTGAGGAGACAGGGCGTCGCCTGGAGAAGTACTGCAAGCGATTTAATGTCCCTTTCGTA
TTCAAAGCCATCGCGAAGAAGTGGGAAAGCATCACGCTTGAAGATCTTGAGATTCAAAGG
GATGAAGTGTTGGTAGTTAACAGTTTGTATAGGCTAGGAAACATACCTGATGAGACAGTA
GTACCAAACAGTCCAAGGGATGCTGTCCTGAATTTAATCAGGAGAATCCGTCCTGATTTG
TTCATCCATGGTGCGTTGAACGGTACTTTCAACACTCCATTTTTCGTCACACGATTCAGG
GAGGCGCTTTTTCACTTCTCCTCACTGTTCGATATGTTTGAGGCTACTATGCCCCACGAG
GATGAGGACAGAAAGCTATTCGAGGAAGAGGTTTATGCAAGAGATGCTATGAACGTGATA
GCTTGTGAAGGGACAGAGAGAGTCGAGAGACCTGAAACATACAAGCAATGGCAACTTAGA
TGCGTTAGAGCTGGATTCAAGCAGGTGCCACTTGACCAGGAGATTGTGAAGATAGTGAGG
AATAAAGTGAGGTCGGAGTACCATAGGGACTTCTCAGTTGATGAAGATGGACACTGGATG
CTGCAAGGATGGAAAGGACGCGTAATTTACGCTCTCTCTTGTTGGAAGCCTACTAAGCAG
TCTGTAAAATTAGGAGTCTAG