Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063767
CDS Infomation

pacid=37438128 polypeptide=PGSC0003DMP400042953 locus=PGSC0003DMG400024780 ID=PGSC0003DMT400063767.v4.03 annot-version=v4.03
Sequence

ATGAAACGTCGGCGCAAATTGTCTCACAAAGAAGGAGTGGTGGAGGTTTCTGATGATATC
GTAATCAACATACTGCATCGTTTGCCTTCAAAATCTCTAGCAAGGTTTAAATGTGTATCC
AAATGTTGGCGGAAGTACATTGCTGATTCATCTCTCAGTTATAGTTGTCGTTCTCGAAGA
TGGAGGCCACAACCCTATCTAATTGGTTTCTTTTATCAAGCTAGGGATACCTGTGAACGT
TCGAAAATTCAGTTCTTCTTCTCTTCCGAGGAATCATCACTAGATATTGATAGTAGTTTT
GATCAATCAGTCAGTTTTCTAGGCAGGAGCGCGTATATAGTTGCATCGTCTAATGGTTTT
CTCCTTTGCAATAGGCAGAGGGTTTATTATGTTTATAATCCTGCTACGAGGCAGAGAATG
GCTCTCCCTAAAACTCAAATCGGCATGAATGATCCAACTATTGGATTTATTTGTAAGGTA
GATGACCCTAATAGAGATGTTATCTCCTTTACTATAGTTCGCTATTGGATTGTACAATCC
AATGTGACAATTGAAAGTTTCTCTTCTGAGACCAATGCGTGGATTGTGGATAATTTAATT
CTCAATGTACCTCTTAGACTGTATTTTTTCGTTTATATGAAATCACCATCAGCTGGTGTA
GTCGACGGAGTATTCTTTTGGCTTGATCAAGGACCACAAATCACTGTTTATGATAGTGTC
CATAAGAGTTTCTGGGCTTTGGGATTTCCTGAAGATATGGTGGCTACAGGCAATTATTTT
CTCGGATTTTCAGGTGGGGATTTCTATTTTGCATTGTATATTAAGACAAATATTACTGTG
TGGCAACTCAAGAGCAATATTCGTAGTCGAGATGCACTGTGGGTTAGGAAGTATGTCACG
GATGTCGCGACTACAGTTCCTTTTGGACTTACTGGATTTCTACATACTGAGGTGCAGAAC
ATGGACATTCATCCTGCTATTCCTCACATCTTTTATTTGGATGTAAAAGGTAAGGTTATT
TCTTATGACATGGAAACAGATATTGCAGAACTTGTGCATGATTTCGGAGAATATGGGTGG
AGAACTAAACACTTCAAATTATTTTCTTATGAGTGGCATCAATGGCCGCGCGGCATTCTG
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400042953
PEP Infomation

pacid=37438128 transcript=PGSC0003DMT400063767 locus=PGSC0003DMG400024780 ID=PGSC0003DMT400063767.v4.03 annot-version=v4.03
Sequence

MKRRRKLSHKEGVVEVSDDIVINILHRLPSKSLARFKCVSKCWRKYIADSSLSYSCRSRR
WRPQPYLIGFFYQARDTCERSKIQFFFSSEESSLDIDSSFDQSVSFLGRSAYIVASSNGF
LLCNRQRVYYVYNPATRQRMALPKTQIGMNDPTIGFICKVDDPNRDVISFTIVRYWIVQS
NVTIESFSSETNAWIVDNLILNVPLRLYFFVYMKSPSAGVVDGVFFWLDQGPQITVYDSV
HKSFWALGFPEDMVATGNYFLGFSGGDFYFALYIKTNITVWQLKSNIRSRDALWVRKYVT
DVATTVPFGLTGFLHTEVQNMDIHPAIPHIFYLDVKGKVISYDMETDIAELVHDFGEYGW
RTKHFKLFSYEWHQWPRGIL*

Transcript Sequence

Transcript ID

PGSC0003DMT400063767
Transcript Infomation

pacid=37438128 locus=PGSC0003DMG400024780 ID=PGSC0003DMT400063767.v4.03 annot-version=v4.03
Sequence

ATGAAACGTCGGCGCAAATTGTCTCACAAAGAAGGAGTGGTGGAGGTTTCTGATGATATC
GTAATCAACATACTGCATCGTTTGCCTTCAAAATCTCTAGCAAGGTTTAAATGTGTATCC
AAATGTTGGCGGAAGTACATTGCTGATTCATCTCTCAGTTATAGTTGTCGTTCTCGAAGA
TGGAGGCCACAACCCTATCTAATTGGTTTCTTTTATCAAGCTAGGGATACCTGTGAACGT
TCGAAAATTCAGTTCTTCTTCTCTTCCGAGGAATCATCACTAGATATTGATAGTAGTTTT
GATCAATCAGTCAGTTTTCTAGGCAGGAGCGCGTATATAGTTGCATCGTCTAATGGTTTT
CTCCTTTGCAATAGGCAGAGGGTTTATTATGTTTATAATCCTGCTACGAGGCAGAGAATG
GCTCTCCCTAAAACTCAAATCGGCATGAATGATCCAACTATTGGATTTATTTGTAAGGTA
GATGACCCTAATAGAGATGTTATCTCCTTTACTATAGTTCGCTATTGGATTGTACAATCC
AATGTGACAATTGAAAGTTTCTCTTCTGAGACCAATGCGTGGATTGTGGATAATTTAATT
CTCAATGTACCTCTTAGACTGTATTTTTTCGTTTATATGAAATCACCATCAGCTGGTGTA
GTCGACGGAGTATTCTTTTGGCTTGATCAAGGACCACAAATCACTGTTTATGATAGTGTC
CATAAGAGTTTCTGGGCTTTGGGATTTCCTGAAGATATGGTGGCTACAGGCAATTATTTT
CTCGGATTTTCAGGTGGGGATTTCTATTTTGCATTGTATATTAAGACAAATATTACTGTG
TGGCAACTCAAGAGCAATATTCGTAGTCGAGATGCACTGTGGGTTAGGAAGTATGTCACG
GATGTCGCGACTACAGTTCCTTTTGGACTTACTGGATTTCTACATACTGAGGTGCAGAAC
ATGGACATTCATCCTGCTATTCCTCACATCTTTTATTTGGATGTAAAAGGTAAGGTTATT
TCTTATGACATGGAAACAGATATTGCAGAACTTGTGCATGATTTCGGAGAATATGGGTGG
AGAACTAAACACTTCAAATTATTTTCTTATGAGTGGCATCAATGGCCGCGCGGCATTCTG
TAG