Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063728
CDS Infomation

pacid=37435363 polypeptide=PGSC0003DMP400042918 locus=PGSC0003DMG403024767 ID=PGSC0003DMT400063728.v4.03 annot-version=v4.03
Sequence

ATGGGGATCACCAAATTTCTCTTTATTCTCATTCTCTTACCTTTCTACCAAGTTCTCTCT
CAATATGAATATGAAACTTTCCATCCATATCAAAGATCCCCTACTCTTGATCCTCATGCT
ATGATCATTCAAGCTTGCAACAACATCCAAAACCAAGCTTTATGCCTCTCACACATACAA
TCCAATCTTGATGATCCTGTCCACAGGGACCCCAATTCAATCCTCAAAGCAGCCATTCAA
AACTCCCTCAATCAAGCAAAGCTAACCATTCAATCCATCACAAAATTCAGCACATTATCA
GCTTCATCCAGGGATCAAATGGCCATCGAGGATTGCCAAGAACTTCTCGATTTCTCAGTC
ACTGAACTAGCATGGTCCTTAGGTGAAATGAGAAAAATCCGAGCTGGTTCAAAGAATGTT
CATTATGAGGGAAATCTCAAGGCGTGGCTGAGTGCTGCATTGAGCAATCAAGACACATGC
TTAGAAGGATTCGAAGGCACAGACCGACACCTCGAACATTTCATCAAGGGCAGTTTAACA
CAAGTAACACAACTCATTAGCAATGTTCTAACTTTATATGTTCAATTACATAGCTTACCA
TTTAAACCACCAAGAAATGAGAACATAACATATGAAAATCAAAAGTATCCAGAGTGGATG
ACAAATGGTGACAAAGATTTGCTAGTTTCTAATCCAAATGGAATGCATGTAGATGCTGTT
GTATCCTTAGATGGAAGCGGCCGTTATCGGTCAATTGCACAGGCTATAAATGAGGCTCCA
AGCTATAGTAACAGGAGATATGTGATCTATGTGAAGAGGGGAACTTACCATGAAAATATT
GATTTGAAGAAGAAAAAAACCAATATCATGCTTCTGGGAGATGGCATTGGAGCCACTGTC
ATTACTGGTAACAGAAATTTCATGCAAGGATGGACTACTTTTAGAACTGCAACTGTTGCT
GTTTCGGGCAAGGGATTTATTGCAAGAGACATAACATTTCGCAACACTGCTGGGCCTAAA
AACTTCCAAGGTGTGGCCCTTCGTGTGGATTCGGACCAATCGGCCTTTTTCAGGTGCAGC
ATGGAAGGATATCAAGACACGCTTTACGCCCATTCACTCCGTCAATTCTATCGAGAATGC
AACATCTATGGCACCATAGATTTCATTTTTGGCAATGGTGCTGCAGTTCTTCAAAACTGC
AAGATTTATACTAGACCTCCACTTCCATTACAGAAGGTAACAATCACGGCCCAAGGTCGA
AAAAGCCCAGATCAAAGCACTGGATTTTCGATCCAAGATAGCTACATTTACGCCACTAGG
CCCACTTATTTGGGCCGGCCCTGGAAAATGTATTCAAGGACTGTTTACATGAATACCTAC
ATGAGTGGAATGGTCCAGCCCAGAGGATGGTTGGAGTGGTATGGGAATTTTGCTTTGAAT
AGCTTGTGGTATGGTGAGTATAAGAATTATGGGCCTGGATCATCACTTACGGGTCGGGTT
ACGTGGCCCGGTTACCATATTATCAAAGATCCTTCATCGGCTAATTTCTTCACTGTTCAA
CATTTCATCGACGGCATGTCGTGGTTGCCGGCCACCGGCGTCCAGTTCTCAGCTGGTCTT
ACTAATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400042918
PEP Infomation

pacid=37435363 transcript=PGSC0003DMT400063728 locus=PGSC0003DMG403024767 ID=PGSC0003DMT400063728.v4.03 annot-version=v4.03
Sequence

MGITKFLFILILLPFYQVLSQYEYETFHPYQRSPTLDPHAMIIQACNNIQNQALCLSHIQ
SNLDDPVHRDPNSILKAAIQNSLNQAKLTIQSITKFSTLSASSRDQMAIEDCQELLDFSV
TELAWSLGEMRKIRAGSKNVHYEGNLKAWLSAALSNQDTCLEGFEGTDRHLEHFIKGSLT
QVTQLISNVLTLYVQLHSLPFKPPRNENITYENQKYPEWMTNGDKDLLVSNPNGMHVDAV
VSLDGSGRYRSIAQAINEAPSYSNRRYVIYVKRGTYHENIDLKKKKTNIMLLGDGIGATV
ITGNRNFMQGWTTFRTATVAVSGKGFIARDITFRNTAGPKNFQGVALRVDSDQSAFFRCS
MEGYQDTLYAHSLRQFYRECNIYGTIDFIFGNGAAVLQNCKIYTRPPLPLQKVTITAQGR
KSPDQSTGFSIQDSYIYATRPTYLGRPWKMYSRTVYMNTYMSGMVQPRGWLEWYGNFALN
SLWYGEYKNYGPGSSLTGRVTWPGYHIIKDPSSANFFTVQHFIDGMSWLPATGVQFSAGL
TN*

Transcript Sequence

Transcript ID

PGSC0003DMT400063728
Transcript Infomation

pacid=37435363 locus=PGSC0003DMG403024767 ID=PGSC0003DMT400063728.v4.03 annot-version=v4.03
Sequence

ATGGGGATCACCAAATTTCTCTTTATTCTCATTCTCTTACCTTTCTACCAAGTTCTCTCT
CAATATGAATATGAAACTTTCCATCCATATCAAAGATCCCCTACTCTTGATCCTCATGCT
ATGATCATTCAAGCTTGCAACAACATCCAAAACCAAGCTTTATGCCTCTCACACATACAA
TCCAATCTTGATGATCCTGTCCACAGGGACCCCAATTCAATCCTCAAAGCAGCCATTCAA
AACTCCCTCAATCAAGCAAAGCTAACCATTCAATCCATCACAAAATTCAGCACATTATCA
GCTTCATCCAGGGATCAAATGGCCATCGAGGATTGCCAAGAACTTCTCGATTTCTCAGTC
ACTGAACTAGCATGGTCCTTAGGTGAAATGAGAAAAATCCGAGCTGGTTCAAAGAATGTT
CATTATGAGGGAAATCTCAAGGCGTGGCTGAGTGCTGCATTGAGCAATCAAGACACATGC
TTAGAAGGATTCGAAGGCACAGACCGACACCTCGAACATTTCATCAAGGGCAGTTTAACA
CAAGTAACACAACTCATTAGCAATGTTCTAACTTTATATGTTCAATTACATAGCTTACCA
TTTAAACCACCAAGAAATGAGAACATAACATATGAAAATCAAAAGTATCCAGAGTGGATG
ACAAATGGTGACAAAGATTTGCTAGTTTCTAATCCAAATGGAATGCATGTAGATGCTGTT
GTATCCTTAGATGGAAGCGGCCGTTATCGGTCAATTGCACAGGCTATAAATGAGGCTCCA
AGCTATAGTAACAGGAGATATGTGATCTATGTGAAGAGGGGAACTTACCATGAAAATATT
GATTTGAAGAAGAAAAAAACCAATATCATGCTTCTGGGAGATGGCATTGGAGCCACTGTC
ATTACTGGTAACAGAAATTTCATGCAAGGATGGACTACTTTTAGAACTGCAACTGTTGCT
GTTTCGGGCAAGGGATTTATTGCAAGAGACATAACATTTCGCAACACTGCTGGGCCTAAA
AACTTCCAAGGTGTGGCCCTTCGTGTGGATTCGGACCAATCGGCCTTTTTCAGGTGCAGC
ATGGAAGGATATCAAGACACGCTTTACGCCCATTCACTCCGTCAATTCTATCGAGAATGC
AACATCTATGGCACCATAGATTTCATTTTTGGCAATGGTGCTGCAGTTCTTCAAAACTGC
AAGATTTATACTAGACCTCCACTTCCATTACAGAAGGTAACAATCACGGCCCAAGGTCGA
AAAAGCCCAGATCAAAGCACTGGATTTTCGATCCAAGATAGCTACATTTACGCCACTAGG
CCCACTTATTTGGGCCGGCCCTGGAAAATGTATTCAAGGACTGTTTACATGAATACCTAC
ATGAGTGGAATGGTCCAGCCCAGAGGATGGTTGGAGTGGTATGGGAATTTTGCTTTGAAT
AGCTTGTGGTATGGTGAGTATAAGAATTATGGGCCTGGATCATCACTTACGGGTCGGGTT
ACGTGGCCCGGTTACCATATTATCAAAGATCCTTCATCGGCTAATTTCTTCACTGTTCAA
CATTTCATCGACGGCATGTCGTGGTTGCCGGCCACCGGCGTCCAGTTCTCAGCTGGTCTT
ACTAATTAG