Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063726
CDS Infomation

pacid=37437520 polypeptide=PGSC0003DMP400042916 locus=PGSC0003DMG402024767 ID=PGSC0003DMT400063726.v4.03 annot-version=v4.03
Sequence

ATGGCGGGAAATAATCGTAAGAGGAATTTCACCATTATTGGTGTATGTTCATTAATCTTG
GTGGCTATGGTAGTTGCAGTAGTCGTAACGATGAATTGGAATGATAAAGAGGCTGAGGCT
AAAGATGTTACGAGTACGAAAAAAGCTATTGAATCCATATGCCAGACTACACAGTATCAA
ACTACATGTGTTGAGAGCCTTGAGGCAACGGGTGAATGCTCCTCAGATCCCAAAGACCTT
ATCCAAATGTCATTTCAGGTGACAATTAAGAAAATTAAGGAAGCAATTGACAATTCAACA
TTCATGCAAAAGCTTGAGAAGGATCCAAGAGCAAAAATGGCCCTGGAGAACTGTGAGATG
CTAGCGTTGCAAGCCGTTAATGATCTCAATAGAACACACATCAAATTCGAAAGTTTTGAG
TTCAATGACCTGAGTCATTGGATTGCTGATTTGAAGATTTGGTTGAGTGGTGCAATTACA
TATCAAGAAACTTGCTTGGATGGCTTTGAGGACACTACCGGAGAGGCGGGGGAGAAAATG
AAAAAGGCACTGAATGTTTCTATGCAGCTAACTAGCAATGCCCTTTCAATGATCACCGAG
ATTTCCGATGTCTTCACAAGCCTCAACGCAGGCTCCAATCGTCGTCGTCTCCTTTTCGAT
GATACCCCTGTTTTGGGTCATGGAATTGAGTTGTTACCTGATTGGATTGATGTGGGAAGG
CGCAGACTTCTTGCTGTTAACATGTCTAACGAAATCAAACCCGATGTGGTTGTTGCCAAG
GATGGATCAGGCAAATACAAGTTTATAAATGACGCTCTCAAACACATCCCAGAGCATAGA
AACCAGACTTATGTTCTGTACATCAAAGAGGGTGTTTATAATGAGAAAGTGGAGATTCTT
AGCACCATGTCGAATTTGGTGATCATTGGGGATGGTCCGACCAAGACCAGAATCACCGGA
AACCAAAGCTTCAAAGATGGCATTCCAACCTATCAAACTTCAACTGTTGCTATAATGGGA
GATTATTTCGTTGCTAAGGACATTGGTTTCGAGAACACTGCTGGTCCAGATAAACACCAG
GCCTTAGCTTTGAGAGTGGCAGCAGATAAATCAATCTTCTACAATTGCCATGTGGACGGT
TACCAAGACACTCTCTGTGCCCACACCTATAGACAATTTTATCGGGATTGTACGATCAGA
GGCACCATCGATTTTGTTTTTGGGGATGCTGCTGCTGTGTTCCAGAACTGCACTCTCGCG
GTACGAAAGCCTATGAAAGAACAACACTGCATTGTGACAGCACAAGGCAGGACAGATGCC
CGCCAGCCAACGGGACTTGTCTTTCAAAACTGCAGCATTGTGGCTGATGAATCTTATAAT
GAGGTCAAGGGGGAAGTCAAGACATATCTTGGTCGTCCATGGAAACAGTATTCAAGAACT
ATCATAATGGAATCTAATATAGATGATCTGATTCAGCCAGAAGGATGGTTGGAATGGAAC
AAAACATTCGCTTTTGAGACACTATTCTATACTGAATTCAACAATAAAGGGTCAGGATCA
TCCAAAACAGATCGTGTAAGATGGTCAGGTGTTAAGGAACTTCCTATCGAACGTGTTCAA
CGATTCACAACATCAAGTTTCATAGATGCCGATTTGTGGATACCATCTACTGGTGTCCCT
TATACCTCAGGATTTTTCTTATCGCCACCACAATCTGATTCTTCCATCGTATACTCCCCA
GTGGATGACCAAGAATACAAAGACATCGCCAGTGAGGATGGAGTTGCAGCTCCCGCAGAA
TCCCCGACCGAATCTTCCGCAGATGCTCCATCGACAGAATCTGTAGCAGACGCCCCGGAG
TCAAAATCGTCAGAGGAATCTCCGTCAGAATCCCCAGCGGAATCTCAGTCACAGTCCCCG
GCAGAATCTCCATCAACATCTCCACCAGAATCTCCGGCAGCAGATACAGATGAATATAAG
GCGACAGCACAAGCACCAAGTTCAGCGGAATCTCCGAGCGGACAAATTTGGCTGCAGGGT
AGTGGGAGTGACGGCAGCTCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400042916
PEP Infomation

pacid=37437520 transcript=PGSC0003DMT400063726 locus=PGSC0003DMG402024767 ID=PGSC0003DMT400063726.v4.03 annot-version=v4.03
Sequence

MAGNNRKRNFTIIGVCSLILVAMVVAVVVTMNWNDKEAEAKDVTSTKKAIESICQTTQYQ
TTCVESLEATGECSSDPKDLIQMSFQVTIKKIKEAIDNSTFMQKLEKDPRAKMALENCEM
LALQAVNDLNRTHIKFESFEFNDLSHWIADLKIWLSGAITYQETCLDGFEDTTGEAGEKM
KKALNVSMQLTSNALSMITEISDVFTSLNAGSNRRRLLFDDTPVLGHGIELLPDWIDVGR
RRLLAVNMSNEIKPDVVVAKDGSGKYKFINDALKHIPEHRNQTYVLYIKEGVYNEKVEIL
STMSNLVIIGDGPTKTRITGNQSFKDGIPTYQTSTVAIMGDYFVAKDIGFENTAGPDKHQ
ALALRVAADKSIFYNCHVDGYQDTLCAHTYRQFYRDCTIRGTIDFVFGDAAAVFQNCTLA
VRKPMKEQHCIVTAQGRTDARQPTGLVFQNCSIVADESYNEVKGEVKTYLGRPWKQYSRT
IIMESNIDDLIQPEGWLEWNKTFAFETLFYTEFNNKGSGSSKTDRVRWSGVKELPIERVQ
RFTTSSFIDADLWIPSTGVPYTSGFFLSPPQSDSSIVYSPVDDQEYKDIASEDGVAAPAE
SPTESSADAPSTESVADAPESKSSEESPSESPAESQSQSPAESPSTSPPESPAADTDEYK
ATAQAPSSAESPSGQIWLQGSGSDGSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400063726
Transcript Infomation

pacid=37437520 locus=PGSC0003DMG402024767 ID=PGSC0003DMT400063726.v4.03 annot-version=v4.03
Sequence

ATGGCGGGAAATAATCGTAAGAGGAATTTCACCATTATTGGTGTATGTTCATTAATCTTG
GTGGCTATGGTAGTTGCAGTAGTCGTAACGATGAATTGGAATGATAAAGAGGCTGAGGCT
AAAGATGTTACGAGTACGAAAAAAGCTATTGAATCCATATGCCAGACTACACAGTATCAA
ACTACATGTGTTGAGAGCCTTGAGGCAACGGGTGAATGCTCCTCAGATCCCAAAGACCTT
ATCCAAATGTCATTTCAGGTGACAATTAAGAAAATTAAGGAAGCAATTGACAATTCAACA
TTCATGCAAAAGCTTGAGAAGGATCCAAGAGCAAAAATGGCCCTGGAGAACTGTGAGATG
CTAGCGTTGCAAGCCGTTAATGATCTCAATAGAACACACATCAAATTCGAAAGTTTTGAG
TTCAATGACCTGAGTCATTGGATTGCTGATTTGAAGATTTGGTTGAGTGGTGCAATTACA
TATCAAGAAACTTGCTTGGATGGCTTTGAGGACACTACCGGAGAGGCGGGGGAGAAAATG
AAAAAGGCACTGAATGTTTCTATGCAGCTAACTAGCAATGCCCTTTCAATGATCACCGAG
ATTTCCGATGTCTTCACAAGCCTCAACGCAGGCTCCAATCGTCGTCGTCTCCTTTTCGAT
GATACCCCTGTTTTGGGTCATGGAATTGAGTTGTTACCTGATTGGATTGATGTGGGAAGG
CGCAGACTTCTTGCTGTTAACATGTCTAACGAAATCAAACCCGATGTGGTTGTTGCCAAG
GATGGATCAGGCAAATACAAGTTTATAAATGACGCTCTCAAACACATCCCAGAGCATAGA
AACCAGACTTATGTTCTGTACATCAAAGAGGGTGTTTATAATGAGAAAGTGGAGATTCTT
AGCACCATGTCGAATTTGGTGATCATTGGGGATGGTCCGACCAAGACCAGAATCACCGGA
AACCAAAGCTTCAAAGATGGCATTCCAACCTATCAAACTTCAACTGTTGCTATAATGGGA
GATTATTTCGTTGCTAAGGACATTGGTTTCGAGAACACTGCTGGTCCAGATAAACACCAG
GCCTTAGCTTTGAGAGTGGCAGCAGATAAATCAATCTTCTACAATTGCCATGTGGACGGT
TACCAAGACACTCTCTGTGCCCACACCTATAGACAATTTTATCGGGATTGTACGATCAGA
GGCACCATCGATTTTGTTTTTGGGGATGCTGCTGCTGTGTTCCAGAACTGCACTCTCGCG
GTACGAAAGCCTATGAAAGAACAACACTGCATTGTGACAGCACAAGGCAGGACAGATGCC
CGCCAGCCAACGGGACTTGTCTTTCAAAACTGCAGCATTGTGGCTGATGAATCTTATAAT
GAGGTCAAGGGGGAAGTCAAGACATATCTTGGTCGTCCATGGAAACAGTATTCAAGAACT
ATCATAATGGAATCTAATATAGATGATCTGATTCAGCCAGAAGGATGGTTGGAATGGAAC
AAAACATTCGCTTTTGAGACACTATTCTATACTGAATTCAACAATAAAGGGTCAGGATCA
TCCAAAACAGATCGTGTAAGATGGTCAGGTGTTAAGGAACTTCCTATCGAACGTGTTCAA
CGATTCACAACATCAAGTTTCATAGATGCCGATTTGTGGATACCATCTACTGGTGTCCCT
TATACCTCAGGATTTTTCTTATCGCCACCACAATCTGATTCTTCCATCGTATACTCCCCA
GTGGATGACCAAGAATACAAAGACATCGCCAGTGAGGATGGAGTTGCAGCTCCCGCAGAA
TCCCCGACCGAATCTTCCGCAGATGCTCCATCGACAGAATCTGTAGCAGACGCCCCGGAG
TCAAAATCGTCAGAGGAATCTCCGTCAGAATCCCCAGCGGAATCTCAGTCACAGTCCCCG
GCAGAATCTCCATCAACATCTCCACCAGAATCTCCGGCAGCAGATACAGATGAATATAAG
GCGACAGCACAAGCACCAAGTTCAGCGGAATCTCCGAGCGGACAAATTTGGCTGCAGGGT
AGTGGGAGTGACGGCAGCTCCTAA