Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063688
CDS Infomation

pacid=37436620 polypeptide=PGSC0003DMP400042887 locus=PGSC0003DMG400024754 ID=PGSC0003DMT400063688.v4.03 annot-version=v4.03
Sequence

ATGGAGATCGAAAACACGAGGGATTCAGATAGTATGAGAGGATCGAGAGTAGGATTCAGC
GGTTCATTAGTCAGTGGGAAGAAAAGTGCAAGGTTCAAAGATGATGAATCGTATGTAGAG
ATCACTCTTGATGTTCGCGATGATTCTGTTTCGGTTCAAAACATTAAGGGAGCTGATCAT
GAAGCTGCATTGTTAGCTAGCAGGCTCGAAAAGAGGCCTAACAATACGCTTGGATCACAA
CTTTCGTTTCATCTGAGGCAAGTTTCGAAGGAATTGAAAAGAATGACTTCTTCTAATAAG
TTTCAGAAAATTGATAGGAGTAAGTCTGGTGCTGCTCGTGCTCTACGTGGACTTCAGTTC
ATGAACAAGAATGTAGGAACTGAAGGATGGTCTGAGGTTGAATCGCGATTCGATCAACTT
GCTGTTAATGGAATGCTAACAAAATCATTGTTTGGTCAATGCATAGGTATGAAGGAATCA
AGTGAGTTTGCTGAGGAATTATTTGATGCTCTAGCTAGGAAGAGATGCATCACATCTCCC
GCGGTGACTAAAGATGAGCTACGCGAATTCTGGGAACAAATAACAGATACTAGCTTTGAT
GCCCGGCTGCAAACTTTCTTCGACATGGTGGACAAAGATGCAGATGGGAGAATTACTCAA
GAAGAGGTGAAAGAGATCATCACTCTTAGTGCTTCTGCAAATAAGTTGTCAAAAATCCAA
GACAATTCAGATGAATATGCAGCTCTCATCATGGAAGAACTAGATCCAGGCAATGTTGGA
TACATTGAGCTGTACAACTTGGAGACATTGCTTCTTCAGGCTCCGAGCCACTCGATGAAT
CTTTCAACAAACAGCAGAGTTCTGAGTCAGATGCTCAGTCAGAAACTTAAGCCAACGAAA
GAGCGAAATCCCTTTAAAAGATGCAAAAGAAGGCTGGACTATTTCATTGAGGACAATTGG
AAGAGGATTTGGGTGATGGCTTTGTGGCTATCAATCTGTGCAGGACTCTTTACATGGAAA
TTTATTCAATATAAACGTCGTGCTGTCTTTGATGTTATGGGCTATTGTGTCTCTGTAGCA
AAAGGAGGTGCTGAAACAACAAAATTCAACATGGCTTTAGTTCTATTGCCAGTATGCAGA
AATACCATAACTTGGCTAAGAAGTAGGACTAAGCTTGGGAAAATAATTCCCTTTGATGAT
AACATCAATTTCCACAAGGTTATTGCATTTGGAATAGCAGTTGGTGTAGGCTTACATGCA
ATTTCACACTTAACATGTGATTTTCCCCGGCTGTTACATGCCACGGATGAGGAATACGAG
CCAATGAAGCCATTTTTCGGAGATGAAAGGCCAAACAACTACTGGTGGTTTGTGAAAGGC
ACGGAAGGATGGACCGGTGTTGTGATGGTGGTCCTTATGATCATAGCCTATGTACTAGCC
CAACCATGGTTTCGTAGAAACCGACTCAATCTTCCATCAACAATCAAGAAACTCACTGGA
TTTAACGCTTTTTGGTACTCCCATCACTTATTTGTTATAGTCTATGTCCTCTTCATCATT
CACGGATACTTCCTCTACCTCTCAAAGAAATGGTACAAGAAAACAACGTGGATGTATATC
GCGGTGCCTATGATACTATATGCTTGTGAACGTCTGCTTCGTGCATTTAGGTCCGGGTAC
AAGGCAGTGAAGATTTTGAAGGTAGCTGTATATCCTGGAAATGTAATGGCAGTGCACATG
TCTAAGCCTCAGGGCTTTAAGTACACAAGTGGACAGTACATTTTAGTGAACTGTTCTGAT
GTTTCTTCATTTCAATGGCATCCGTTTACTATCTCCTCAGCTCCAGGAGATGATTACCTA
AGTATGCACATTCGAACATTGGGTGATTGGACATCTCAGCTTAAAACTCTCTTCTCTAAG
GTCTGTGAGCCTCCAACTGGTGATCAAAGTGGCCTTTTAAGAGCAGACATAGCGAAAGCC
GACTATAAGCCTAGATTGCCAAAGCTCTTGATTGATGGCCCTTATGGAGCACCAGCACAG
GATTACAAGAAATACGACGTAGTCCTCTTAGTAGGCCTTGGCATTGGGGCAACACCTTTG
ATAAGTATAGTAAAAGATGTGCTCAATAACATCAAGCAACAAAAGGACATCGAAGATGGC
ACTAAAGGTAGTAAAAGAAGTCCTTTTGCAACTAAACGAGCTTACTTCTATTGGGTAACA
CGCGAGCAAGGCTCGTTTGAGTGGTTTAAGGGTGTGATGGATGAGGTCTCGGAGAACGAT
CAAGAAGGCCTAATTGAGCTTCACAACTACTGCACCAGCGTTTATGAAGAAGGCGATGCC
CGGTCTGCACTAATCACAATGCTTCAGTCAATCCACCAAGCTAAGAGTGGCGTCGACATT
GTCTCTGGGACAAGAGTCAAGACTCATTTTGCTAGACCAAATTGGCGCCAAGTTTTCAAA
CGTGTTACAATTAATCATCCTGATCAAAGAATTGGTGTGTTTTATTGTGGTCCACAAGGT
CTAGTTGGAGAACTAAGACATCTATCTCAAGATTTCTCACACAAGACAGGCACAAAGTTT
GAATTTCATAAAGAAAATTTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400042887
PEP Infomation

pacid=37436620 transcript=PGSC0003DMT400063688 locus=PGSC0003DMG400024754 ID=PGSC0003DMT400063688.v4.03 annot-version=v4.03
Sequence

MEIENTRDSDSMRGSRVGFSGSLVSGKKSARFKDDESYVEITLDVRDDSVSVQNIKGADH
EAALLASRLEKRPNNTLGSQLSFHLRQVSKELKRMTSSNKFQKIDRSKSGAARALRGLQF
MNKNVGTEGWSEVESRFDQLAVNGMLTKSLFGQCIGMKESSEFAEELFDALARKRCITSP
AVTKDELREFWEQITDTSFDARLQTFFDMVDKDADGRITQEEVKEIITLSASANKLSKIQ
DNSDEYAALIMEELDPGNVGYIELYNLETLLLQAPSHSMNLSTNSRVLSQMLSQKLKPTK
ERNPFKRCKRRLDYFIEDNWKRIWVMALWLSICAGLFTWKFIQYKRRAVFDVMGYCVSVA
KGGAETTKFNMALVLLPVCRNTITWLRSRTKLGKIIPFDDNINFHKVIAFGIAVGVGLHA
ISHLTCDFPRLLHATDEEYEPMKPFFGDERPNNYWWFVKGTEGWTGVVMVVLMIIAYVLA
QPWFRRNRLNLPSTIKKLTGFNAFWYSHHLFVIVYVLFIIHGYFLYLSKKWYKKTTWMYI
AVPMILYACERLLRAFRSGYKAVKILKVAVYPGNVMAVHMSKPQGFKYTSGQYILVNCSD
VSSFQWHPFTISSAPGDDYLSMHIRTLGDWTSQLKTLFSKVCEPPTGDQSGLLRADIAKA
DYKPRLPKLLIDGPYGAPAQDYKKYDVVLLVGLGIGATPLISIVKDVLNNIKQQKDIEDG
TKGSKRSPFATKRAYFYWVTREQGSFEWFKGVMDEVSENDQEGLIELHNYCTSVYEEGDA
RSALITMLQSIHQAKSGVDIVSGTRVKTHFARPNWRQVFKRVTINHPDQRIGVFYCGPQG
LVGELRHLSQDFSHKTGTKFEFHKENF*

Transcript Sequence

Transcript ID

PGSC0003DMT400063688
Transcript Infomation

pacid=37436620 locus=PGSC0003DMG400024754 ID=PGSC0003DMT400063688.v4.03 annot-version=v4.03
Sequence

ATGGAGATCGAAAACACGAGGGATTCAGATAGTATGAGAGGATCGAGAGTAGGATTCAGC
GGTTCATTAGTCAGTGGGAAGAAAAGTGCAAGGTTCAAAGATGATGAATCGTATGTAGAG
ATCACTCTTGATGTTCGCGATGATTCTGTTTCGGTTCAAAACATTAAGGGAGCTGATCAT
GAAGCTGCATTGTTAGCTAGCAGGCTCGAAAAGAGGCCTAACAATACGCTTGGATCACAA
CTTTCGTTTCATCTGAGGCAAGTTTCGAAGGAATTGAAAAGAATGACTTCTTCTAATAAG
TTTCAGAAAATTGATAGGAGTAAGTCTGGTGCTGCTCGTGCTCTACGTGGACTTCAGTTC
ATGAACAAGAATGTAGGAACTGAAGGATGGTCTGAGGTTGAATCGCGATTCGATCAACTT
GCTGTTAATGGAATGCTAACAAAATCATTGTTTGGTCAATGCATAGGTATGAAGGAATCA
AGTGAGTTTGCTGAGGAATTATTTGATGCTCTAGCTAGGAAGAGATGCATCACATCTCCC
GCGGTGACTAAAGATGAGCTACGCGAATTCTGGGAACAAATAACAGATACTAGCTTTGAT
GCCCGGCTGCAAACTTTCTTCGACATGGTGGACAAAGATGCAGATGGGAGAATTACTCAA
GAAGAGGTGAAAGAGATCATCACTCTTAGTGCTTCTGCAAATAAGTTGTCAAAAATCCAA
GACAATTCAGATGAATATGCAGCTCTCATCATGGAAGAACTAGATCCAGGCAATGTTGGA
TACATTGAGCTGTACAACTTGGAGACATTGCTTCTTCAGGCTCCGAGCCACTCGATGAAT
CTTTCAACAAACAGCAGAGTTCTGAGTCAGATGCTCAGTCAGAAACTTAAGCCAACGAAA
GAGCGAAATCCCTTTAAAAGATGCAAAAGAAGGCTGGACTATTTCATTGAGGACAATTGG
AAGAGGATTTGGGTGATGGCTTTGTGGCTATCAATCTGTGCAGGACTCTTTACATGGAAA
TTTATTCAATATAAACGTCGTGCTGTCTTTGATGTTATGGGCTATTGTGTCTCTGTAGCA
AAAGGAGGTGCTGAAACAACAAAATTCAACATGGCTTTAGTTCTATTGCCAGTATGCAGA
AATACCATAACTTGGCTAAGAAGTAGGACTAAGCTTGGGAAAATAATTCCCTTTGATGAT
AACATCAATTTCCACAAGGTTATTGCATTTGGAATAGCAGTTGGTGTAGGCTTACATGCA
ATTTCACACTTAACATGTGATTTTCCCCGGCTGTTACATGCCACGGATGAGGAATACGAG
CCAATGAAGCCATTTTTCGGAGATGAAAGGCCAAACAACTACTGGTGGTTTGTGAAAGGC
ACGGAAGGATGGACCGGTGTTGTGATGGTGGTCCTTATGATCATAGCCTATGTACTAGCC
CAACCATGGTTTCGTAGAAACCGACTCAATCTTCCATCAACAATCAAGAAACTCACTGGA
TTTAACGCTTTTTGGTACTCCCATCACTTATTTGTTATAGTCTATGTCCTCTTCATCATT
CACGGATACTTCCTCTACCTCTCAAAGAAATGGTACAAGAAAACAACGTGGATGTATATC
GCGGTGCCTATGATACTATATGCTTGTGAACGTCTGCTTCGTGCATTTAGGTCCGGGTAC
AAGGCAGTGAAGATTTTGAAGGTAGCTGTATATCCTGGAAATGTAATGGCAGTGCACATG
TCTAAGCCTCAGGGCTTTAAGTACACAAGTGGACAGTACATTTTAGTGAACTGTTCTGAT
GTTTCTTCATTTCAATGGCATCCGTTTACTATCTCCTCAGCTCCAGGAGATGATTACCTA
AGTATGCACATTCGAACATTGGGTGATTGGACATCTCAGCTTAAAACTCTCTTCTCTAAG
GTCTGTGAGCCTCCAACTGGTGATCAAAGTGGCCTTTTAAGAGCAGACATAGCGAAAGCC
GACTATAAGCCTAGATTGCCAAAGCTCTTGATTGATGGCCCTTATGGAGCACCAGCACAG
GATTACAAGAAATACGACGTAGTCCTCTTAGTAGGCCTTGGCATTGGGGCAACACCTTTG
ATAAGTATAGTAAAAGATGTGCTCAATAACATCAAGCAACAAAAGGACATCGAAGATGGC
ACTAAAGGTAGTAAAAGAAGTCCTTTTGCAACTAAACGAGCTTACTTCTATTGGGTAACA
CGCGAGCAAGGCTCGTTTGAGTGGTTTAAGGGTGTGATGGATGAGGTCTCGGAGAACGAT
CAAGAAGGCCTAATTGAGCTTCACAACTACTGCACCAGCGTTTATGAAGAAGGCGATGCC
CGGTCTGCACTAATCACAATGCTTCAGTCAATCCACCAAGCTAAGAGTGGCGTCGACATT
GTCTCTGGGACAAGAGTCAAGACTCATTTTGCTAGACCAAATTGGCGCCAAGTTTTCAAA
CGTGTTACAATTAATCATCCTGATCAAAGAATTGGTGTGTTTTATTGTGGTCCACAAGGT
CTAGTTGGAGAACTAAGACATCTATCTCAAGATTTCTCACACAAGACAGGCACAAAGTTT
GAATTTCATAAAGAAAATTTCTAG