Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063648
CDS Infomation

pacid=37439757 polypeptide=PGSC0003DMP400042852 locus=PGSC0003DMG400024739 ID=PGSC0003DMT400063648.v4.03 annot-version=v4.03
Sequence

ATGGATTCTTCATTATCAGCTTCCACCACCATGCTTACTTGCTCTTCCAAACTTCACCAT
TATCCACCTCGAAGTTTTCGTTTCCTCTCTTTCTCCCTCCCCATTTTCCGCAAACTCGGA
ATTTGCCCCAAATTTCTTTCAAAATCTCCAAATCTTACTGTCCGAAGTTCCAGTTCCATC
ACTGCTAAACCCTCCTGGGAATTTCAGAAAAAGGGTAGCGGAAAAGAACAGGATAACAAG
CTACGTGCTCTTCGTGAGATCTTTACTAGGCCTGGTGTTAATGTTGATGCTTATATTATT
CCTTCCCAAGACGCCCATCAGAGTGAGTTCATTGCCGAATGTTATATGCGAAGAACCTAT
ATATCAGGATTTACGGGAAGTGCAGGCACTGCGGTTGTTACCAAGGATAAAGCAGCCTTG
TGGACAGATGGGCGATATTTTTTGCAGGCTGAGAAGCAGTTGAACTCTAGTTGGGATCTG
ATGAGAGCTGGTAACATGGGGGTGCCTACTCCTAGTCAGTGGCTTAACACTGTCCTAGCA
CCTGGTTGCAGGATCGGTATAGATCCTTTTCTTTTTTCATCTGATGCTGCAAAAGAATTC
AAAGAAGACATTTCTAAAGGGAACCATGAGTTGGTCTTTTTGTATGATTTCAACCTTGTA
GATGAAATTTGGAAGGAGTCGAGGCCAAATCCTCCAAAGGAACCAATTAGATTGCATGAC
CTAAAATATGCTGGTGTAAATGTGTCGTCAAAGCTTTCATGCTTGAGATCTGAATTAAGA
AATGCTGGTGCATCGGCGATTGTTATCTCCATGCTTGACGAAATTGCATGGCTATTGAAC
TTGAGAGGTAATGATATCCGACATTCACCAGTCATGTACGCATATTTAGTTGTGGAGATA
GATGGGGTAAAATTGTTCGTAGATGATACTAAAGTAACACCTGAAGTTATGGAGCACTTG
ACAAATGCTGGCATAGAATTGAGAGCATATGAATCCATTCTTTCTGAAATTGAAAGTTTG
GCAGCAAAAGGAGCAAACCTTTGGTTGGACACTTCATCAGTCAATGCTGCTATTGTAAAT
GCATATGAATCAGCTTGTTACAAATATCCTTGGGATTCTGCAACTAAAAGCAGGAAGAAG
AGGACTGCCAACCTTGATTCCAATGGTCAATCTGGGGGACCATGTGCAGTATATAGGAGT
TCTCCTGTCTCTCTGAGTAAAGCTGTCAAAAATGATGCTGAGTTAGAAGGGATGCGTAAC
TGCCATCTAAGGGATGCGGCTGCATTAGCTCAATTTTGGGCTTGGCTGGAGGATGAAATC
CAAAGGGATGTTGTTCTGACAGAAGTAGAAGTTGCAGACAAACTTCTTGAATTTCGCTCA
CACCAAGATGGCTTTCTTGATACAAGCTTCGACACCATAAGTGGTTCGGGTGCCAATGGT
GCTATAATTCATTACAAGCCAGAGTCAGATAGTTGTAGCACTGTGGATGGGAAGAAACTC
TTCCTTTTAGACAGTGGAGGCCAATATATTGATGGAACGACTGATATTACGAGGACAGTG
CATTTTGGTGAACCATCTGCAAGAGAAAGAGAATGTTTCACCCGAGTACTACAGGGTCAC
ATAGCACTCGACCAAGCAGTTTTCCCTGAGAATACTCCTGGTTTCGTGTTGGATGCATTT
GCACGGTCCTCCTTATGGAAAGTTGGCCTTGATTACCGGCATGGAACTGGGCATGGTGTT
GGAGCTGCACTAAATGTTCATGAAGGCCCACATAGCATTAGTTTCCGCTTTGGAAATATC
ACTCCTTTGTTGACAGGCATGATTGTCAGCAATGAACCAGGTTACTATGAAGACCATCAT
TTTGGTATTCGAATTGAGAATCTTCTCTACGTTAAAGAAGAAGATACACCAAATCGTTTT
GGAGGAATAGGATATCTGGGATTTGAAAAGCTTACTTTTGTTCCCATACAGACTAAATTG
GTGGACATATCTTTGCTCTCTGTTGCGGAAGTAGAGTGGCTCAATAGTTACCACTTGCAA
GTTTGGGAGAAGGTTTCACCTCTGCTGGATGGTTCTGCACGCCAATGGCTTTGGAACAAC
ACACAGCCTATTATAAAGCTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400042852
PEP Infomation

pacid=37439757 transcript=PGSC0003DMT400063648 locus=PGSC0003DMG400024739 ID=PGSC0003DMT400063648.v4.03 annot-version=v4.03
Sequence

MDSSLSASTTMLTCSSKLHHYPPRSFRFLSFSLPIFRKLGICPKFLSKSPNLTVRSSSSI
TAKPSWEFQKKGSGKEQDNKLRALREIFTRPGVNVDAYIIPSQDAHQSEFIAECYMRRTY
ISGFTGSAGTAVVTKDKAALWTDGRYFLQAEKQLNSSWDLMRAGNMGVPTPSQWLNTVLA
PGCRIGIDPFLFSSDAAKEFKEDISKGNHELVFLYDFNLVDEIWKESRPNPPKEPIRLHD
LKYAGVNVSSKLSCLRSELRNAGASAIVISMLDEIAWLLNLRGNDIRHSPVMYAYLVVEI
DGVKLFVDDTKVTPEVMEHLTNAGIELRAYESILSEIESLAAKGANLWLDTSSVNAAIVN
AYESACYKYPWDSATKSRKKRTANLDSNGQSGGPCAVYRSSPVSLSKAVKNDAELEGMRN
CHLRDAAALAQFWAWLEDEIQRDVVLTEVEVADKLLEFRSHQDGFLDTSFDTISGSGANG
AIIHYKPESDSCSTVDGKKLFLLDSGGQYIDGTTDITRTVHFGEPSARERECFTRVLQGH
IALDQAVFPENTPGFVLDAFARSSLWKVGLDYRHGTGHGVGAALNVHEGPHSISFRFGNI
TPLLTGMIVSNEPGYYEDHHFGIRIENLLYVKEEDTPNRFGGIGYLGFEKLTFVPIQTKL
VDISLLSVAEVEWLNSYHLQVWEKVSPLLDGSARQWLWNNTQPIIKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400063648
Transcript Infomation

pacid=37439757 locus=PGSC0003DMG400024739 ID=PGSC0003DMT400063648.v4.03 annot-version=v4.03
Sequence

ATGGATTCTTCATTATCAGCTTCCACCACCATGCTTACTTGCTCTTCCAAACTTCACCAT
TATCCACCTCGAAGTTTTCGTTTCCTCTCTTTCTCCCTCCCCATTTTCCGCAAACTCGGA
ATTTGCCCCAAATTTCTTTCAAAATCTCCAAATCTTACTGTCCGAAGTTCCAGTTCCATC
ACTGCTAAACCCTCCTGGGAATTTCAGAAAAAGGGTAGCGGAAAAGAACAGGATAACAAG
CTACGTGCTCTTCGTGAGATCTTTACTAGGCCTGGTGTTAATGTTGATGCTTATATTATT
CCTTCCCAAGACGCCCATCAGAGTGAGTTCATTGCCGAATGTTATATGCGAAGAACCTAT
ATATCAGGATTTACGGGAAGTGCAGGCACTGCGGTTGTTACCAAGGATAAAGCAGCCTTG
TGGACAGATGGGCGATATTTTTTGCAGGCTGAGAAGCAGTTGAACTCTAGTTGGGATCTG
ATGAGAGCTGGTAACATGGGGGTGCCTACTCCTAGTCAGTGGCTTAACACTGTCCTAGCA
CCTGGTTGCAGGATCGGTATAGATCCTTTTCTTTTTTCATCTGATGCTGCAAAAGAATTC
AAAGAAGACATTTCTAAAGGGAACCATGAGTTGGTCTTTTTGTATGATTTCAACCTTGTA
GATGAAATTTGGAAGGAGTCGAGGCCAAATCCTCCAAAGGAACCAATTAGATTGCATGAC
CTAAAATATGCTGGTGTAAATGTGTCGTCAAAGCTTTCATGCTTGAGATCTGAATTAAGA
AATGCTGGTGCATCGGCGATTGTTATCTCCATGCTTGACGAAATTGCATGGCTATTGAAC
TTGAGAGGTAATGATATCCGACATTCACCAGTCATGTACGCATATTTAGTTGTGGAGATA
GATGGGGTAAAATTGTTCGTAGATGATACTAAAGTAACACCTGAAGTTATGGAGCACTTG
ACAAATGCTGGCATAGAATTGAGAGCATATGAATCCATTCTTTCTGAAATTGAAAGTTTG
GCAGCAAAAGGAGCAAACCTTTGGTTGGACACTTCATCAGTCAATGCTGCTATTGTAAAT
GCATATGAATCAGCTTGTTACAAATATCCTTGGGATTCTGCAACTAAAAGCAGGAAGAAG
AGGACTGCCAACCTTGATTCCAATGGTCAATCTGGGGGACCATGTGCAGTATATAGGAGT
TCTCCTGTCTCTCTGAGTAAAGCTGTCAAAAATGATGCTGAGTTAGAAGGGATGCGTAAC
TGCCATCTAAGGGATGCGGCTGCATTAGCTCAATTTTGGGCTTGGCTGGAGGATGAAATC
CAAAGGGATGTTGTTCTGACAGAAGTAGAAGTTGCAGACAAACTTCTTGAATTTCGCTCA
CACCAAGATGGCTTTCTTGATACAAGCTTCGACACCATAAGTGGTTCGGGTGCCAATGGT
GCTATAATTCATTACAAGCCAGAGTCAGATAGTTGTAGCACTGTGGATGGGAAGAAACTC
TTCCTTTTAGACAGTGGAGGCCAATATATTGATGGAACGACTGATATTACGAGGACAGTG
CATTTTGGTGAACCATCTGCAAGAGAAAGAGAATGTTTCACCCGAGTACTACAGGGTCAC
ATAGCACTCGACCAAGCAGTTTTCCCTGAGAATACTCCTGGTTTCGTGTTGGATGCATTT
GCACGGTCCTCCTTATGGAAAGTTGGCCTTGATTACCGGCATGGAACTGGGCATGGTGTT
GGAGCTGCACTAAATGTTCATGAAGGCCCACATAGCATTAGTTTCCGCTTTGGAAATATC
ACTCCTTTGTTGACAGGCATGATTGTCAGCAATGAACCAGGTTACTATGAAGACCATCAT
TTTGGTATTCGAATTGAGAATCTTCTCTACGTTAAAGAAGAAGATACACCAAATCGTTTT
GGAGGAATAGGATATCTGGGATTTGAAAAGCTTACTTTTGTTCCCATACAGACTAAATTG
GTGGACATATCTTTGCTCTCTGTTGCGGAAGTAGAGTGGCTCAATAGTTACCACTTGCAA
GTTTGGGAGAAGGTTTCACCTCTGCTGGATGGTTCTGCACGCCAATGGCTTTGGAACAAC
ACACAGCCTATTATAAAGCTGTAA