Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063630
CDS Infomation

pacid=37438010 polypeptide=PGSC0003DMP400042843 locus=PGSC0003DMG400024735 ID=PGSC0003DMT400063630.v4.03 annot-version=v4.03
Sequence

ATGTCGGCAAATCTCCCAATTCTTCCCAACGCAATCTCAATTCCCGCCAGGAATGCCACT
AGTGAGAACCTCTTCGCCGCCGTAGACATCGGTACTAACTCCTTCAAGCTCCTCGTAGTT
CGCGCCGACCCTTCCACCGGCCGTTTCCTCACCGTCGATCGGTTCAAGGAAAGAGTCCTC
CTCGGCCTTGATACTAATACCACCACTACCTCCGCCACTATCTCCAACGCCTCTCTGCTA
CGTGCCACCGCAGCACTTCGAAAGTTTCAGAAGCTTCTCCAGTCACATCGCGTTCCTTCC
TCCCATTCTCGCTTCGTAGCTACTTCTGCTGTTCGAGAAGCTTCCAATCGATCACAATTC
CTTCAAACGATTGATGAAACCCTAGGCCTGAAAGTTGATGTACTCTCCGGTCTCGAAGAG
GCCCGCCTTATATACAAAGGTATACTTCAATTCCATCCTGTTCATGACTATACAGTTCTC
ACAATTGACATTGGAGGTGGCTCTACAGAGTTTGTAATTGGCAAAGAGGGGCAGATTTTG
TTCTCTATTTCACTAGCATTGGGACATGTCACTTTAACTCAAAAATTTCCAAAAGTTACA
GAAATGCGGGAACATATTAAGGTTATAATCCGTGCCTCGGGCTTAAATGAGAAGGTTAAG
CATTATAATATTGATAAAGTGATTGGTTCATCAGGGACAATTAGGAATATTGAAAAGGCT
ATTTTCCGTGGCTATGCAAGCAATATGGAGGGAAATGTGGGCATATCTGAGGAAAGTAGG
AGGGATTGGAGTTTTACAACGGACGAATTGAAGGGCTTAGTGGAGAGGTTGAGTGAGGAA
GAGAGAAGAGTTGGAGGGAAGGTTCGAACGCAAGGCTTTTTCAAGAAGAGGTCAGAATTT
ATTGTGGCAGGGGCAGTTTTATTGGAGGAAATATTTGAGGAGCTTAAGATTGAGGAGATG
GAGGTTTCTGGGTATGCATTAGGTGAGGGTGTGATTGCAGAGAAGTTAGGGGAGGTTTTT
GATAATTATGATCCAAGGGCGAATGCGAGGTGGAGGTCTGTAACGAGGCTCGCGACAAGG
TTTAATAACAAGCAACACATGAAATCTGCTGCATTATGCTTTAGTGTTGCCAAGGAGATG
TTTGATGGTTTGAGAAAAGGGTATGAATCAGGCAATGGTTCTGATGGATTCTTTGTATCC
TTGGAGGATAAAGATCTCGAGTATCTCGAGGCAGCTTGTTTGCTTCAAAAAATTGGTCTT
TATGCTGGTAAAAAGGGCTATCATAAGCAATCTTACCATATAATAGCGAAAGGCGATCAT
CTACATGGTTATAATGCCGAAGAGGTTAAGTTAATAGCTCTACTTGTGAGACACCATAGA
AAGAAACTTCCTGAATGTGATCATGTGGTGCCTGAGGAATTAACAGAAGAGATGAGAGGG
AAATTCAGAATTCTTTGTGCAATTCTACGTGTATCTGCTGCACTGGAGAAACTTCAGCTG
GTCAACATCCACAATGTGGATTTCTCACATACCTGTGAAGGATATAAATTGGTACTTGAA
GCAGGAAATTTGCCCTTCCCTGGTTATGTGCTGCCATCAGTGAAAGACCTCGAGACTGAG
CATGTTAAAGAGTTGGAGCACTTCAGAATGGTGTTCCAGGAAAGATTGTCAATTGCTGTC
ACTTCATCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400042843
PEP Infomation

pacid=37438010 transcript=PGSC0003DMT400063630 locus=PGSC0003DMG400024735 ID=PGSC0003DMT400063630.v4.03 annot-version=v4.03
Sequence

MSANLPILPNAISIPARNATSENLFAAVDIGTNSFKLLVVRADPSTGRFLTVDRFKERVL
LGLDTNTTTTSATISNASLLRATAALRKFQKLLQSHRVPSSHSRFVATSAVREASNRSQF
LQTIDETLGLKVDVLSGLEEARLIYKGILQFHPVHDYTVLTIDIGGGSTEFVIGKEGQIL
FSISLALGHVTLTQKFPKVTEMREHIKVIIRASGLNEKVKHYNIDKVIGSSGTIRNIEKA
IFRGYASNMEGNVGISEESRRDWSFTTDELKGLVERLSEEERRVGGKVRTQGFFKKRSEF
IVAGAVLLEEIFEELKIEEMEVSGYALGEGVIAEKLGEVFDNYDPRANARWRSVTRLATR
FNNKQHMKSAALCFSVAKEMFDGLRKGYESGNGSDGFFVSLEDKDLEYLEAACLLQKIGL
YAGKKGYHKQSYHIIAKGDHLHGYNAEEVKLIALLVRHHRKKLPECDHVVPEELTEEMRG
KFRILCAILRVSAALEKLQLVNIHNVDFSHTCEGYKLVLEAGNLPFPGYVLPSVKDLETE
HVKELEHFRMVFQERLSIAVTSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400063630
Transcript Infomation

pacid=37438010 locus=PGSC0003DMG400024735 ID=PGSC0003DMT400063630.v4.03 annot-version=v4.03
Sequence

ATGTCGGCAAATCTCCCAATTCTTCCCAACGCAATCTCAATTCCCGCCAGGAATGCCACT
AGTGAGAACCTCTTCGCCGCCGTAGACATCGGTACTAACTCCTTCAAGCTCCTCGTAGTT
CGCGCCGACCCTTCCACCGGCCGTTTCCTCACCGTCGATCGGTTCAAGGAAAGAGTCCTC
CTCGGCCTTGATACTAATACCACCACTACCTCCGCCACTATCTCCAACGCCTCTCTGCTA
CGTGCCACCGCAGCACTTCGAAAGTTTCAGAAGCTTCTCCAGTCACATCGCGTTCCTTCC
TCCCATTCTCGCTTCGTAGCTACTTCTGCTGTTCGAGAAGCTTCCAATCGATCACAATTC
CTTCAAACGATTGATGAAACCCTAGGCCTGAAAGTTGATGTACTCTCCGGTCTCGAAGAG
GCCCGCCTTATATACAAAGGTATACTTCAATTCCATCCTGTTCATGACTATACAGTTCTC
ACAATTGACATTGGAGGTGGCTCTACAGAGTTTGTAATTGGCAAAGAGGGGCAGATTTTG
TTCTCTATTTCACTAGCATTGGGACATGTCACTTTAACTCAAAAATTTCCAAAAGTTACA
GAAATGCGGGAACATATTAAGGTTATAATCCGTGCCTCGGGCTTAAATGAGAAGGTTAAG
CATTATAATATTGATAAAGTGATTGGTTCATCAGGGACAATTAGGAATATTGAAAAGGCT
ATTTTCCGTGGCTATGCAAGCAATATGGAGGGAAATGTGGGCATATCTGAGGAAAGTAGG
AGGGATTGGAGTTTTACAACGGACGAATTGAAGGGCTTAGTGGAGAGGTTGAGTGAGGAA
GAGAGAAGAGTTGGAGGGAAGGTTCGAACGCAAGGCTTTTTCAAGAAGAGGTCAGAATTT
ATTGTGGCAGGGGCAGTTTTATTGGAGGAAATATTTGAGGAGCTTAAGATTGAGGAGATG
GAGGTTTCTGGGTATGCATTAGGTGAGGGTGTGATTGCAGAGAAGTTAGGGGAGGTTTTT
GATAATTATGATCCAAGGGCGAATGCGAGGTGGAGGTCTGTAACGAGGCTCGCGACAAGG
TTTAATAACAAGCAACACATGAAATCTGCTGCATTATGCTTTAGTGTTGCCAAGGAGATG
TTTGATGGTTTGAGAAAAGGGTATGAATCAGGCAATGGTTCTGATGGATTCTTTGTATCC
TTGGAGGATAAAGATCTCGAGTATCTCGAGGCAGCTTGTTTGCTTCAAAAAATTGGTCTT
TATGCTGGTAAAAAGGGCTATCATAAGCAATCTTACCATATAATAGCGAAAGGCGATCAT
CTACATGGTTATAATGCCGAAGAGGTTAAGTTAATAGCTCTACTTGTGAGACACCATAGA
AAGAAACTTCCTGAATGTGATCATGTGGTGCCTGAGGAATTAACAGAAGAGATGAGAGGG
AAATTCAGAATTCTTTGTGCAATTCTACGTGTATCTGCTGCACTGGAGAAACTTCAGCTG
GTCAACATCCACAATGTGGATTTCTCACATACCTGTGAAGGATATAAATTGGTACTTGAA
GCAGGAAATTTGCCCTTCCCTGGTTATGTGCTGCCATCAGTGAAAGACCTCGAGACTGAG
CATGTTAAAGAGTTGGAGCACTTCAGAATGGTGTTCCAGGAAAGATTGTCAATTGCTGTC
ACTTCATCATAA