Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063603
CDS Infomation

pacid=37440337 polypeptide=PGSC0003DMP400042819 locus=PGSC0003DMG400024727 ID=PGSC0003DMT400063603.v4.03 annot-version=v4.03
Sequence

ATGTCTTCTCTTAGCAGAGAATTGGTGTTCCTCATACTCCAGTTTCTAGAAGAGGAGAAA
TTTAAGGAGTCCGTTCACAAGCTAGAGCAAGAATCAGGATTTTTCTTCAATATGAAGTAC
TTTGAGGAGAAAGTACATGCAGGTGAATGGGACGAAGTTGAGAAGTACTTGTCCGGATTT
ACCAAAGTTGATGACAACAGATATTCAATGAAAATCTTTTTTGAGATAAGAAAGCAGAAA
TATCTTGAAGCTCTTGATAAGCAAGACAAGGCAAAGGCAGTTGAGATTCTTGTGAGTGAT
TTGAAAGTGTTCTCTACATTCAATGAGGACCTTTACAAAGAGATCACTCAGCTCTTGACA
CTTACCAATTTCAGAGAGAACGAGCAGCTTTCGAAGTATGGTGACACCAAGACAGCGCGT
AGCATAATGTTGATAGAGCTGAAGAAGTTGATTGAAGCAAATCCTCTTTTCCGTGAAAAG
CTCGTCTTCCCGACTCTGAGATCTTCAAGATTGCGTACATTAATCAATCAAAGTCTCAAC
TGGCAGCACCAGCTTTGCAAGAACCCAAGGCCAAACCCTGACATTAAGACTCTGTTCACA
GATCATACATGCACTCCTCCAAATGGGGCTGTTGCACCTACACCCGTTAATCTTCCTCCT
GCAGCGATTGCAAAACCTGCCGCTTTTACAGCACTTGGTGCACATGGGCCCTTTCCACCC
GCAGCAGCAGCAGCTGCAAATGCTAATGCTTTAGCAGGTTGGATGGCAAACGCCGCTGCT
TCTTCATCTGTCCAAGCTGCTGTTGTGACAGCATCATCCCTGCCTGTTCCACCAAATCAA
GTTTCAATTTTGAAGCGCCCCCTCACCCCTCCAGCTACATTAGGTATGCTTGACTATCAG
AGTGCTGATCATGAGCAATTAATGAAACGTTTACGACCTGCACAGTCTGTTGAGGAGGTT
ACGTATCCTACAGTTCGTCAGCAGTCTTCTTGGTCCCTTGATGACTTACCAAGGACTGTA
GCTTTTACTTTACCTCAAGGATCCTCAGTCACTAGCATGGACTTTCATCCTTCTCATCAT
ACATATCTGCTTGTTGGATCCACCAATGGTGAAATAACACTCTGGGAAGTAGCAACACGA
GAGAAGTTGGTTGCGAAGGCATTTAAAATATGGGATGTTCAAGCGTGTACTCATACATTT
CAGGCTTCTGCTTCCAAAGATGCACCATTTTCTGTAAGCCGTGTTGCATGGAGTCCAGAT
GGGACCTTCGTTGGAGTTGCATTCTCTAAGCATTTGGTCCATCTGTATGCCACTGTTGGA
ACAAATGATTTGCGCCAGCATTTGGAGATGGATGCCCATGCTGGGAGTGTTAATGACTTA
GCATTTGCTTATCCAAACAAGCAGTTATGTATAGTAACATGTGGAGATGATAAGTTGATA
AAGGTGTGGGATATAACAGGAAGAAAGCTGTTTAATTTTGAAGGACATGAAGCTCCTGTA
TATTCCATATGCCCTCATCAGAAGGAGAGCATTCAGTTCATTTTTTCTACTGCTATAGAT
GGGAAAATAAAAGCTTGGCTGTATGACAATATGGGATCTCGAGTTGACTATGATGCTCCT
GGTCATTGGTGTACCACCATGCTTTATAGTGCTGACGGAACTAGATTGTTCTCTTGTGGA
ACTGGTAAAGAAGGTGATTCTTTTCTTGTGGAATGGAATGAAAGTGAAGGAGCCATAAAG
AGGACTTATTCTGGGTTTAGAAAGAAATCAGCTGGTGTTGTGCAGTTTGACACTACTCAA
AATCACTTCTTGGCTGTGGGTGAAGATAGCCAGATAAAATTTTGGGACATGGACAATATA
AACATTCTTACAACTATAGATGCTGATGGTGGTCTCCCGAGTCTTCCACGCTTGAGATTC
AACAAGGAGGGGAATCTTCTTGCTGTTACTACAGCTGACAATGGGATTAAGATACTGGGA
AACGCTGCTGGTATGAGATCCTTGAGAACAGTTGAGGCCCCGCCTTTTGAAGCACTAAGA
TCACCCATTGAAGCAGCTGCTATTAAGCAGGGTTCTGGCTCTTCTGTTCCAAATGCTACT
CCTGTCAATTGTAAAGTTGAAAGGAGCTCTCCTATCAGGCCGTCTCCTATCCTTAATGGA
GTTGATTCTGTGCCCAGAAGCATGGAGAAACCAAGAATATTGGAGGAAGTTTCAGATAAG
GCCAAACCCTGGCAGTTAACTGAAATTTTAGACCAAGCTCAATGCAGGCTGGTTACCATG
CCTGAGAGTTCAGATTCGAATAATAAGGTTGCAAGGCTTCTTTATACAAATTCTGGTGTT
GGTATCCTGGCACTTGGTTCGAATGGTACTCAAAAGCTGTGGAAGTGGACGCGCAATGAA
CAAAATCCAAGTGGCAAGGCCACTGCTAATGTTGTTCCACAATATTGGCAACCGAACAGT
GGTCTTCTTATGACCAACGATATCGTAGGTATTAATTTGGAAGAGGCTGTTCCTTGCATT
GCTCTCTCAAAGAATGACTCTTATGTAATGTCAGCTGCTGGTGGAAAAGTGTCACTATTC
AATATGATGACGTTTAAGGTAATGACAACATTTATGCCACCTCCGCCGGCTTCAACTTTC
TTAGCATTCCATCCTCAAGATAACAATATTATCGCCATTGGCATGGAGGACTCAACAATC
CACATTTACAATGTTAGGGTTGATGAGGTAAAATCCAAGTTAAAAGGCCATCAGAAGCGC
ATTACTGGTCTTGCTTTCTCCACCAACCTCAACATATTGGTTTCATCAGGTGCTGATGCT
CAGGTCTGTTTATGGAGCATTGATTCATGGGACAAGAGGAAATCAGTTCCCATTCAACTG
CCTGCTGGTAAAGCACCTAGTGGTGACACTCGAGTACAATTTCATGCGGACCAAGTCCGC
CTGCTAGTATCCCATGAAACACAGTTGGCAATTTATGATGCATCAAAGATGGAAAGAATT
CGCCAGTGGGTCCCTCAAGATGCACTTTCTGCACCAATAACCTATGCGGCTTACTCTTGC
AACAGTCAACTAGTTTATGCTTCCTTTTCTGATGGCAACATTGGGGTATTTGATGCCGAT
ACCCTAAGACTCAGATGTCGTGTTGCTCCCTCGGCTTATTTGTCCCAGGCAGTGTTGACT
GGGAGTCAATCTGTGTATCCGCTAGTAGTTGCAGCACATCCACAGGAACCCAGCCAATTT
GCAGTTGGGTTGACAGATGGAACTGTTAAAGTGATTGAACCACTGGAATCCGATGGGAAG
TGGGGCGTAAGTCCACCTATTGATAACGGGATGTTAAATGGCAGGGTGGCCTCCTCTTCG
AACGCTAACAACCATGTTGCCGACCAAGTTCAAAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400042819
PEP Infomation

pacid=37440337 transcript=PGSC0003DMT400063603 locus=PGSC0003DMG400024727 ID=PGSC0003DMT400063603.v4.03 annot-version=v4.03
Sequence

MSSLSRELVFLILQFLEEEKFKESVHKLEQESGFFFNMKYFEEKVHAGEWDEVEKYLSGF
TKVDDNRYSMKIFFEIRKQKYLEALDKQDKAKAVEILVSDLKVFSTFNEDLYKEITQLLT
LTNFRENEQLSKYGDTKTARSIMLIELKKLIEANPLFREKLVFPTLRSSRLRTLINQSLN
WQHQLCKNPRPNPDIKTLFTDHTCTPPNGAVAPTPVNLPPAAIAKPAAFTALGAHGPFPP
AAAAAANANALAGWMANAAASSSVQAAVVTASSLPVPPNQVSILKRPLTPPATLGMLDYQ
SADHEQLMKRLRPAQSVEEVTYPTVRQQSSWSLDDLPRTVAFTLPQGSSVTSMDFHPSHH
TYLLVGSTNGEITLWEVATREKLVAKAFKIWDVQACTHTFQASASKDAPFSVSRVAWSPD
GTFVGVAFSKHLVHLYATVGTNDLRQHLEMDAHAGSVNDLAFAYPNKQLCIVTCGDDKLI
KVWDITGRKLFNFEGHEAPVYSICPHQKESIQFIFSTAIDGKIKAWLYDNMGSRVDYDAP
GHWCTTMLYSADGTRLFSCGTGKEGDSFLVEWNESEGAIKRTYSGFRKKSAGVVQFDTTQ
NHFLAVGEDSQIKFWDMDNINILTTIDADGGLPSLPRLRFNKEGNLLAVTTADNGIKILG
NAAGMRSLRTVEAPPFEALRSPIEAAAIKQGSGSSVPNATPVNCKVERSSPIRPSPILNG
VDSVPRSMEKPRILEEVSDKAKPWQLTEILDQAQCRLVTMPESSDSNNKVARLLYTNSGV
GILALGSNGTQKLWKWTRNEQNPSGKATANVVPQYWQPNSGLLMTNDIVGINLEEAVPCI
ALSKNDSYVMSAAGGKVSLFNMMTFKVMTTFMPPPPASTFLAFHPQDNNIIAIGMEDSTI
HIYNVRVDEVKSKLKGHQKRITGLAFSTNLNILVSSGADAQVCLWSIDSWDKRKSVPIQL
PAGKAPSGDTRVQFHADQVRLLVSHETQLAIYDASKMERIRQWVPQDALSAPITYAAYSC
NSQLVYASFSDGNIGVFDADTLRLRCRVAPSAYLSQAVLTGSQSVYPLVVAAHPQEPSQF
AVGLTDGTVKVIEPLESDGKWGVSPPIDNGMLNGRVASSSNANNHVADQVQR*

Transcript Sequence

Transcript ID

PGSC0003DMT400063603
Transcript Infomation

pacid=37440337 locus=PGSC0003DMG400024727 ID=PGSC0003DMT400063603.v4.03 annot-version=v4.03
Sequence

ATGTCTTCTCTTAGCAGAGAATTGGTGTTCCTCATACTCCAGTTTCTAGAAGAGGAGAAA
TTTAAGGAGTCCGTTCACAAGCTAGAGCAAGAATCAGGATTTTTCTTCAATATGAAGTAC
TTTGAGGAGAAAGTACATGCAGGTGAATGGGACGAAGTTGAGAAGTACTTGTCCGGATTT
ACCAAAGTTGATGACAACAGATATTCAATGAAAATCTTTTTTGAGATAAGAAAGCAGAAA
TATCTTGAAGCTCTTGATAAGCAAGACAAGGCAAAGGCAGTTGAGATTCTTGTGAGTGAT
TTGAAAGTGTTCTCTACATTCAATGAGGACCTTTACAAAGAGATCACTCAGCTCTTGACA
CTTACCAATTTCAGAGAGAACGAGCAGCTTTCGAAGTATGGTGACACCAAGACAGCGCGT
AGCATAATGTTGATAGAGCTGAAGAAGTTGATTGAAGCAAATCCTCTTTTCCGTGAAAAG
CTCGTCTTCCCGACTCTGAGATCTTCAAGATTGCGTACATTAATCAATCAAAGTCTCAAC
TGGCAGCACCAGCTTTGCAAGAACCCAAGGCCAAACCCTGACATTAAGACTCTGTTCACA
GATCATACATGCACTCCTCCAAATGGGGCTGTTGCACCTACACCCGTTAATCTTCCTCCT
GCAGCGATTGCAAAACCTGCCGCTTTTACAGCACTTGGTGCACATGGGCCCTTTCCACCC
GCAGCAGCAGCAGCTGCAAATGCTAATGCTTTAGCAGGTTGGATGGCAAACGCCGCTGCT
TCTTCATCTGTCCAAGCTGCTGTTGTGACAGCATCATCCCTGCCTGTTCCACCAAATCAA
GTTTCAATTTTGAAGCGCCCCCTCACCCCTCCAGCTACATTAGGTATGCTTGACTATCAG
AGTGCTGATCATGAGCAATTAATGAAACGTTTACGACCTGCACAGTCTGTTGAGGAGGTT
ACGTATCCTACAGTTCGTCAGCAGTCTTCTTGGTCCCTTGATGACTTACCAAGGACTGTA
GCTTTTACTTTACCTCAAGGATCCTCAGTCACTAGCATGGACTTTCATCCTTCTCATCAT
ACATATCTGCTTGTTGGATCCACCAATGGTGAAATAACACTCTGGGAAGTAGCAACACGA
GAGAAGTTGGTTGCGAAGGCATTTAAAATATGGGATGTTCAAGCGTGTACTCATACATTT
CAGGCTTCTGCTTCCAAAGATGCACCATTTTCTGTAAGCCGTGTTGCATGGAGTCCAGAT
GGGACCTTCGTTGGAGTTGCATTCTCTAAGCATTTGGTCCATCTGTATGCCACTGTTGGA
ACAAATGATTTGCGCCAGCATTTGGAGATGGATGCCCATGCTGGGAGTGTTAATGACTTA
GCATTTGCTTATCCAAACAAGCAGTTATGTATAGTAACATGTGGAGATGATAAGTTGATA
AAGGTGTGGGATATAACAGGAAGAAAGCTGTTTAATTTTGAAGGACATGAAGCTCCTGTA
TATTCCATATGCCCTCATCAGAAGGAGAGCATTCAGTTCATTTTTTCTACTGCTATAGAT
GGGAAAATAAAAGCTTGGCTGTATGACAATATGGGATCTCGAGTTGACTATGATGCTCCT
GGTCATTGGTGTACCACCATGCTTTATAGTGCTGACGGAACTAGATTGTTCTCTTGTGGA
ACTGGTAAAGAAGGTGATTCTTTTCTTGTGGAATGGAATGAAAGTGAAGGAGCCATAAAG
AGGACTTATTCTGGGTTTAGAAAGAAATCAGCTGGTGTTGTGCAGTTTGACACTACTCAA
AATCACTTCTTGGCTGTGGGTGAAGATAGCCAGATAAAATTTTGGGACATGGACAATATA
AACATTCTTACAACTATAGATGCTGATGGTGGTCTCCCGAGTCTTCCACGCTTGAGATTC
AACAAGGAGGGGAATCTTCTTGCTGTTACTACAGCTGACAATGGGATTAAGATACTGGGA
AACGCTGCTGGTATGAGATCCTTGAGAACAGTTGAGGCCCCGCCTTTTGAAGCACTAAGA
TCACCCATTGAAGCAGCTGCTATTAAGCAGGGTTCTGGCTCTTCTGTTCCAAATGCTACT
CCTGTCAATTGTAAAGTTGAAAGGAGCTCTCCTATCAGGCCGTCTCCTATCCTTAATGGA
GTTGATTCTGTGCCCAGAAGCATGGAGAAACCAAGAATATTGGAGGAAGTTTCAGATAAG
GCCAAACCCTGGCAGTTAACTGAAATTTTAGACCAAGCTCAATGCAGGCTGGTTACCATG
CCTGAGAGTTCAGATTCGAATAATAAGGTTGCAAGGCTTCTTTATACAAATTCTGGTGTT
GGTATCCTGGCACTTGGTTCGAATGGTACTCAAAAGCTGTGGAAGTGGACGCGCAATGAA
CAAAATCCAAGTGGCAAGGCCACTGCTAATGTTGTTCCACAATATTGGCAACCGAACAGT
GGTCTTCTTATGACCAACGATATCGTAGGTATTAATTTGGAAGAGGCTGTTCCTTGCATT
GCTCTCTCAAAGAATGACTCTTATGTAATGTCAGCTGCTGGTGGAAAAGTGTCACTATTC
AATATGATGACGTTTAAGGTAATGACAACATTTATGCCACCTCCGCCGGCTTCAACTTTC
TTAGCATTCCATCCTCAAGATAACAATATTATCGCCATTGGCATGGAGGACTCAACAATC
CACATTTACAATGTTAGGGTTGATGAGGTAAAATCCAAGTTAAAAGGCCATCAGAAGCGC
ATTACTGGTCTTGCTTTCTCCACCAACCTCAACATATTGGTTTCATCAGGTGCTGATGCT
CAGGTCTGTTTATGGAGCATTGATTCATGGGACAAGAGGAAATCAGTTCCCATTCAACTG
CCTGCTGGTAAAGCACCTAGTGGTGACACTCGAGTACAATTTCATGCGGACCAAGTCCGC
CTGCTAGTATCCCATGAAACACAGTTGGCAATTTATGATGCATCAAAGATGGAAAGAATT
CGCCAGTGGGTCCCTCAAGATGCACTTTCTGCACCAATAACCTATGCGGCTTACTCTTGC
AACAGTCAACTAGTTTATGCTTCCTTTTCTGATGGCAACATTGGGGTATTTGATGCCGAT
ACCCTAAGACTCAGATGTCGTGTTGCTCCCTCGGCTTATTTGTCCCAGGCAGTGTTGACT
GGGAGTCAATCTGTGTATCCGCTAGTAGTTGCAGCACATCCACAGGAACCCAGCCAATTT
GCAGTTGGGTTGACAGATGGAACTGTTAAAGTGATTGAACCACTGGAATCCGATGGGAAG
TGGGGCGTAAGTCCACCTATTGATAACGGGATGTTAAATGGCAGGGTGGCCTCCTCTTCG
AACGCTAACAACCATGTTGCCGACCAAGTTCAAAGATGA