Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063542
CDS Infomation

pacid=37437624 polypeptide=PGSC0003DMP400042779 locus=PGSC0003DMG400024706 ID=PGSC0003DMT400063542.v4.03 annot-version=v4.03
Sequence

ATGGGTCATCATGGTTTTAGGATTCTTTTACATTTTCTCTTTATCATCACCTTCATTCTT
GTATCTTTCTGTTGTACACATATTTTGGTTAGGGATGTCTCATTGAATGCTGCAAAGTAC
TTGAATAGTATTCATGGCTTTAAAGAGCTAAATTATATGGTTAGAAATGGGGATGGAAAC
GAAAGTCCAATTGGAAAGATCTATGGAGGGAAGCAAATCTTGATTGTGGAAAAGTTCAGA
ACTTTACTTGGACTGAGTAGGTTTAGTCCAAGAAATGGTGATTTTGCATATTTTGCAGTA
TCACCTTCACCTTCTCCATCACCATCAATTTCCCCTGAAGCACCAGCTCCTTCACCGGTG
CCACGAGTTCATCGGCATCCTCATCCACATTCTCATCACCATCCCTTTATCCCAGCTGCA
CACAGGGTAAGGGTGAAAAGAAGAGGGAGGAGTACTAGAGTTTTAACAGCTGTTCTTGTT
TCTGCTGGGATTTCAACTGTATTGTGTGCAATTGCCCTTTTTTGGGGCTGCAAAAAGTTC
AAGAAACAAAGAAAGAAATCAACTAGATCAGTGTCACTGTTCAGCAGTGAAGCAGGAAGT
GTATGTAGATCAAGGTATGGTAGCTCTCAGAATTCAGTGAAAAAGGTAACTTCTGATCCA
GGCCCTGACCTTTTTTACCTTGATTCACTAGAAGTTGCTCTCGAATCATCGGAATCGATT
TGTCTAAATAAAAGTTCTGTAATTGAAAAAATTGACTCAAATGAAAACATAGCAAACAAT
ACATTGAGTGAGAAAGATGAACAAGAAGAGGAAATCAGTGTGTCAATGCCTGATGATGAT
AATTGTTCAGGTGTTGGAGAAATTGTCTGTGTTTATGAAAGTGCAGATTCAATGAAGTGT
GATATCAATGATTGTAACTCTTCCAGTGGTGACAAAATAGTTCCTGAGGAAGTTCATTCA
TCAGATGATGAAGAAATATTCCATTCTTTATGTAATTCGCGTTCGTCTAGTAATAGATTA
TCCAATGTTTCAGCTGGTAGTCTTATAGATACCTCAGAAATTATGCCTCAAGAAGAATTA
AAAACCTTAACTTGTTCTGTATCCTCCTCAACACACTTGTCTACTCCACCCCCACCGCCT
CCACCTCCACCGCCTCCTTCGCCTACATTTCCAACTCAATCTCCTTGTAGGCCTACAGTT
TCTTCAGTGAAAATGAAGTCGAAAGTTTTGAGTCATGCTTCATTGCAAATTGAATCATCC
ACTAGAAATTCAGATAGTTCTTTGGAAAATGATTTGTTACAATCACCTCCAAATCAGGCT
AAGCCTGCTGGAGGAATTCCACCCCCACCTTGTCCTCCACCATTTGCAAGTGGAAGTACT
AGTCTTTCAAAAGGCCCGCCCCCTCCACTGTCTTTGCCTTTCCAACAATTGGCATTAGGC
AAAGATGGAAGTCCACTCCCAAAATTGAAACCACTTCACTGGGACAAAGTAAGAGCTGCA
CCAGACCGATCAACTGTTTGGGACAAGCTCAGACCAAGCTCGTTCGAATTTGATGAGGAA
ATGATTGAGTCACTTTTCGGCTACAATCTACACAATTCTATGAAGATTGATGAAGGGAAA
AGCAAAACTCCATCTCCAAGCAAGCATGTTCTTGAGCCTAAAAGACTACAAAACATAAGC
ATACTGTCCAAAGCTTTGGGTGTGACTGTAGAACAAGTTTCTGAAGCACTAATAAAAGGA
AACGGATTGTTTTTGCCACAACTGGAGGCTCTGGCTAAGATGGTACCTACTAAAGAAGAA
GAGGACAAACTGTCAAGTTATAAAGGAGACATCAATGAACTAGGGTCAGCAGAGAAGTTT
GTAATGGCAATGCTTAAGGTGCCATTTGCATTCTTGAGAATAGAAGCCATGCTTTATCGC
GAGACATTTGATGATGAAGTTAATCTTCTCAAAAAATCTTTCTCAATGCTAGAGGAGGCC
TGCAAGGAACTCAGATCAAGTCGACTGTTCTTAAAATTGCTAGAAGCAGTGTTGAAAACT
GGAAACAGGATGAACATTGGGACAATAAGAGGAGGAGCCAGAGCATTCAAACTTGATGCC
TTACTTAAGCTATCCGACGTAAAAGGCACTGATGGAAAAACCACACTGCTTCATTTCGTC
GTTCAAGAAATCATTCGATCAGAAGGCTTGAAGGTCTCACAAAGCATCATGGGAAAAATA
GACGGGAGACGCAAGATTAAAACTATTGCAGACAGAGAGGAAGATTACAAAAGGATGGGT
CTTGATCTTGTTTCTGGTCTAGGCACTGAGCTATTCAATGTCAAGAAAACAGCCACAATG
GACTTGGATGTCATCGCAACCTCAGTCTCAGATCTATCAGAAGAAATGAACAAGATAAAA
GCATTAGTAACAAATGACTTGTCTCCATTTGAAAATAATGGTAACTTTGTGCACTCAATG
ACAACATTCTTGAATTATGCAGAAAGGAACCTAAAGGAATTACAGGAAGACGAGAATCGA
GTTCTTTTACGTGTTAAAGAAGTCACAGAATACTTCCACGGAAATGTAAGCAAAGATGAA
TCCAACCCTCTCAGGATTTTTGTCATTGTGAGAGATTTCTTGAACATGTTAGATCATGTA
TGCAAAGAGCTTAGAAGCTCAAAAACACCTAATAGTCTTAACCCTCTAGCCCCATTCAGA
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400042779
PEP Infomation

pacid=37437624 transcript=PGSC0003DMT400063542 locus=PGSC0003DMG400024706 ID=PGSC0003DMT400063542.v4.03 annot-version=v4.03
Sequence

MGHHGFRILLHFLFIITFILVSFCCTHILVRDVSLNAAKYLNSIHGFKELNYMVRNGDGN
ESPIGKIYGGKQILIVEKFRTLLGLSRFSPRNGDFAYFAVSPSPSPSPSISPEAPAPSPV
PRVHRHPHPHSHHHPFIPAAHRVRVKRRGRSTRVLTAVLVSAGISTVLCAIALFWGCKKF
KKQRKKSTRSVSLFSSEAGSVCRSRYGSSQNSVKKVTSDPGPDLFYLDSLEVALESSESI
CLNKSSVIEKIDSNENIANNTLSEKDEQEEEISVSMPDDDNCSGVGEIVCVYESADSMKC
DINDCNSSSGDKIVPEEVHSSDDEEIFHSLCNSRSSSNRLSNVSAGSLIDTSEIMPQEEL
KTLTCSVSSSTHLSTPPPPPPPPPPPSPTFPTQSPCRPTVSSVKMKSKVLSHASLQIESS
TRNSDSSLENDLLQSPPNQAKPAGGIPPPPCPPPFASGSTSLSKGPPPPLSLPFQQLALG
KDGSPLPKLKPLHWDKVRAAPDRSTVWDKLRPSSFEFDEEMIESLFGYNLHNSMKIDEGK
SKTPSPSKHVLEPKRLQNISILSKALGVTVEQVSEALIKGNGLFLPQLEALAKMVPTKEE
EDKLSSYKGDINELGSAEKFVMAMLKVPFAFLRIEAMLYRETFDDEVNLLKKSFSMLEEA
CKELRSSRLFLKLLEAVLKTGNRMNIGTIRGGARAFKLDALLKLSDVKGTDGKTTLLHFV
VQEIIRSEGLKVSQSIMGKIDGRRKIKTIADREEDYKRMGLDLVSGLGTELFNVKKTATM
DLDVIATSVSDLSEEMNKIKALVTNDLSPFENNGNFVHSMTTFLNYAERNLKELQEDENR
VLLRVKEVTEYFHGNVSKDESNPLRIFVIVRDFLNMLDHVCKELRSSKTPNSLNPLAPFR
*

Transcript Sequence

Transcript ID

PGSC0003DMT400063542
Transcript Infomation

pacid=37437624 locus=PGSC0003DMG400024706 ID=PGSC0003DMT400063542.v4.03 annot-version=v4.03
Sequence

ATGGGTCATCATGGTTTTAGGATTCTTTTACATTTTCTCTTTATCATCACCTTCATTCTT
GTATCTTTCTGTTGTACACATATTTTGGTTAGGGATGTCTCATTGAATGCTGCAAAGTAC
TTGAATAGTATTCATGGCTTTAAAGAGCTAAATTATATGGTTAGAAATGGGGATGGAAAC
GAAAGTCCAATTGGAAAGATCTATGGAGGGAAGCAAATCTTGATTGTGGAAAAGTTCAGA
ACTTTACTTGGACTGAGTAGGTTTAGTCCAAGAAATGGTGATTTTGCATATTTTGCAGTA
TCACCTTCACCTTCTCCATCACCATCAATTTCCCCTGAAGCACCAGCTCCTTCACCGGTG
CCACGAGTTCATCGGCATCCTCATCCACATTCTCATCACCATCCCTTTATCCCAGCTGCA
CACAGGGTAAGGGTGAAAAGAAGAGGGAGGAGTACTAGAGTTTTAACAGCTGTTCTTGTT
TCTGCTGGGATTTCAACTGTATTGTGTGCAATTGCCCTTTTTTGGGGCTGCAAAAAGTTC
AAGAAACAAAGAAAGAAATCAACTAGATCAGTGTCACTGTTCAGCAGTGAAGCAGGAAGT
GTATGTAGATCAAGGTATGGTAGCTCTCAGAATTCAGTGAAAAAGGTAACTTCTGATCCA
GGCCCTGACCTTTTTTACCTTGATTCACTAGAAGTTGCTCTCGAATCATCGGAATCGATT
TGTCTAAATAAAAGTTCTGTAATTGAAAAAATTGACTCAAATGAAAACATAGCAAACAAT
ACATTGAGTGAGAAAGATGAACAAGAAGAGGAAATCAGTGTGTCAATGCCTGATGATGAT
AATTGTTCAGGTGTTGGAGAAATTGTCTGTGTTTATGAAAGTGCAGATTCAATGAAGTGT
GATATCAATGATTGTAACTCTTCCAGTGGTGACAAAATAGTTCCTGAGGAAGTTCATTCA
TCAGATGATGAAGAAATATTCCATTCTTTATGTAATTCGCGTTCGTCTAGTAATAGATTA
TCCAATGTTTCAGCTGGTAGTCTTATAGATACCTCAGAAATTATGCCTCAAGAAGAATTA
AAAACCTTAACTTGTTCTGTATCCTCCTCAACACACTTGTCTACTCCACCCCCACCGCCT
CCACCTCCACCGCCTCCTTCGCCTACATTTCCAACTCAATCTCCTTGTAGGCCTACAGTT
TCTTCAGTGAAAATGAAGTCGAAAGTTTTGAGTCATGCTTCATTGCAAATTGAATCATCC
ACTAGAAATTCAGATAGTTCTTTGGAAAATGATTTGTTACAATCACCTCCAAATCAGGCT
AAGCCTGCTGGAGGAATTCCACCCCCACCTTGTCCTCCACCATTTGCAAGTGGAAGTACT
AGTCTTTCAAAAGGCCCGCCCCCTCCACTGTCTTTGCCTTTCCAACAATTGGCATTAGGC
AAAGATGGAAGTCCACTCCCAAAATTGAAACCACTTCACTGGGACAAAGTAAGAGCTGCA
CCAGACCGATCAACTGTTTGGGACAAGCTCAGACCAAGCTCGTTCGAATTTGATGAGGAA
ATGATTGAGTCACTTTTCGGCTACAATCTACACAATTCTATGAAGATTGATGAAGGGAAA
AGCAAAACTCCATCTCCAAGCAAGCATGTTCTTGAGCCTAAAAGACTACAAAACATAAGC
ATACTGTCCAAAGCTTTGGGTGTGACTGTAGAACAAGTTTCTGAAGCACTAATAAAAGGA
AACGGATTGTTTTTGCCACAACTGGAGGCTCTGGCTAAGATGGTACCTACTAAAGAAGAA
GAGGACAAACTGTCAAGTTATAAAGGAGACATCAATGAACTAGGGTCAGCAGAGAAGTTT
GTAATGGCAATGCTTAAGGTGCCATTTGCATTCTTGAGAATAGAAGCCATGCTTTATCGC
GAGACATTTGATGATGAAGTTAATCTTCTCAAAAAATCTTTCTCAATGCTAGAGGAGGCC
TGCAAGGAACTCAGATCAAGTCGACTGTTCTTAAAATTGCTAGAAGCAGTGTTGAAAACT
GGAAACAGGATGAACATTGGGACAATAAGAGGAGGAGCCAGAGCATTCAAACTTGATGCC
TTACTTAAGCTATCCGACGTAAAAGGCACTGATGGAAAAACCACACTGCTTCATTTCGTC
GTTCAAGAAATCATTCGATCAGAAGGCTTGAAGGTCTCACAAAGCATCATGGGAAAAATA
GACGGGAGACGCAAGATTAAAACTATTGCAGACAGAGAGGAAGATTACAAAAGGATGGGT
CTTGATCTTGTTTCTGGTCTAGGCACTGAGCTATTCAATGTCAAGAAAACAGCCACAATG
GACTTGGATGTCATCGCAACCTCAGTCTCAGATCTATCAGAAGAAATGAACAAGATAAAA
GCATTAGTAACAAATGACTTGTCTCCATTTGAAAATAATGGTAACTTTGTGCACTCAATG
ACAACATTCTTGAATTATGCAGAAAGGAACCTAAAGGAATTACAGGAAGACGAGAATCGA
GTTCTTTTACGTGTTAAAGAAGTCACAGAATACTTCCACGGAAATGTAAGCAAAGATGAA
TCCAACCCTCTCAGGATTTTTGTCATTGTGAGAGATTTCTTGAACATGTTAGATCATGTA
TGCAAAGAGCTTAGAAGCTCAAAAACACCTAATAGTCTTAACCCTCTAGCCCCATTCAGA
TAG