Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063510
CDS Infomation

pacid=37435902 polypeptide=PGSC0003DMP400042753 locus=PGSC0003DMG400024704 ID=PGSC0003DMT400063510.v4.03 annot-version=v4.03
Sequence

ATGACCTCTACCCTCTCTGCCTCCTCCGCTTGGCCCGAAAGCCCTTTCGTTCCCCCTCCT
ATGTCGGAAAATCCTCCTGATTCCGATGATCGTTCCTCTCTCTCTGACCTCTCCGATATC
TCAGCTGCCGTAACTGATGCCGTTGATGATGATGAACGTCGCTCTCAAACCTCGGTTACC
TCTCCCACTAATACAGCCGCCACTAGCGTACAGAACGTGAACCCTAGCCCTAATTCTATT
TCTCTTCCCGTTGATTCCTCTACTCCGAATGTCCTCTACCTATCCTTCAACCAGGATTAC
GGATGCTTCGCGGCAGGCACCGATCGAGGGTTCCGGATCTACAACTGTGATCCGCTCCGT
GAGATTTTCCGCCGCGATTTTACCGGCAATTCTAATGGTGGAGGTGGAATTGGTGTTGTT
CAGATGCTTTTTCGGTGCAATATTTTGGCGTTGGTTGGTGGAGGTCCGGAACCTCAATAT
CCCTTGAATAAGGTGATGATATGGGATGATCATCAATCTAGGTGCATCGGCGAGCTATCG
TTTCGATCTGAGGTGAAATCTGTGAGGCTGAGAAGGGATAGAATTGTGGTTGTTTTGGCC
CAGAAGATATTTGTTTACAACTTTTCGGATTTGAAACTGTTACATCAGATTGAGACAGTG
GCGAACCCCAAGGGTTTGTGTGAAGTGTCACAGGTATCGGGATCAATGGTTCTGGTTTGT
CCGGGTCTTCAGAAGGGTCAGGTGAGAGTGGAACATTATGCTTCTAAGAGGACCAAGTTT
ATAATGGCACATGACTCGAGGATTGTGTGTTTTGCGCTTACAAATGATGGGAGGTTGTTG
GCTACTTCTAGCAGTAAAGGGACTCTTGTCAGAATATATAATACTTTAGATGGATCTTTG
GTCCAAGAGGTCAGAAGAGGCGCAGATAGAGCAGAAATTTATAGCCTTGCTTTTTCTCCA
ACTGCACAATGGCTAGCTGTTTCCAGTGATAAAGGAACTGTCCATGTGTTCAATCTAAAG
GTTGATTCAGCAGCTTTAGGAGTTGATAGACCAAGAGGGGCATCTGAGTCAAATGCTACA
TCTCCATCAGCTGGGTCTCATCTCTCCTTCATAAGAGGTGTGCTACCGAAGTATTTCAGC
TCTGAGTGGTCTGTGGCTCAGTTCCGCTTGCAAGAAGGTCTGCAGCACATTGTGGCCTTC
GGTCACCAAAAGAATACGGTTGTGATTCTTGGCATGGATGGCAGTTTCTACCGATGCCAG
TATGATGCAGCAACTGGTGGGGAGATGACCCTGTTGGAACATCATAGTTTCTTGAAGTCC
GAGGAGAACTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400042753
PEP Infomation

pacid=37435902 transcript=PGSC0003DMT400063510 locus=PGSC0003DMG400024704 ID=PGSC0003DMT400063510.v4.03 annot-version=v4.03
Sequence

MTSTLSASSAWPESPFVPPPMSENPPDSDDRSSLSDLSDISAAVTDAVDDDERRSQTSVT
SPTNTAATSVQNVNPSPNSISLPVDSSTPNVLYLSFNQDYGCFAAGTDRGFRIYNCDPLR
EIFRRDFTGNSNGGGGIGVVQMLFRCNILALVGGGPEPQYPLNKVMIWDDHQSRCIGELS
FRSEVKSVRLRRDRIVVVLAQKIFVYNFSDLKLLHQIETVANPKGLCEVSQVSGSMVLVC
PGLQKGQVRVEHYASKRTKFIMAHDSRIVCFALTNDGRLLATSSSKGTLVRIYNTLDGSL
VQEVRRGADRAEIYSLAFSPTAQWLAVSSDKGTVHVFNLKVDSAALGVDRPRGASESNAT
SPSAGSHLSFIRGVLPKYFSSEWSVAQFRLQEGLQHIVAFGHQKNTVVILGMDGSFYRCQ
YDAATGGEMTLLEHHSFLKSEENF*

Transcript Sequence

Transcript ID

PGSC0003DMT400063510
Transcript Infomation

pacid=37435902 locus=PGSC0003DMG400024704 ID=PGSC0003DMT400063510.v4.03 annot-version=v4.03
Sequence

ATGACCTCTACCCTCTCTGCCTCCTCCGCTTGGCCCGAAAGCCCTTTCGTTCCCCCTCCT
ATGTCGGAAAATCCTCCTGATTCCGATGATCGTTCCTCTCTCTCTGACCTCTCCGATATC
TCAGCTGCCGTAACTGATGCCGTTGATGATGATGAACGTCGCTCTCAAACCTCGGTTACC
TCTCCCACTAATACAGCCGCCACTAGCGTACAGAACGTGAACCCTAGCCCTAATTCTATT
TCTCTTCCCGTTGATTCCTCTACTCCGAATGTCCTCTACCTATCCTTCAACCAGGATTAC
GGATGCTTCGCGGCAGGCACCGATCGAGGGTTCCGGATCTACAACTGTGATCCGCTCCGT
GAGATTTTCCGCCGCGATTTTACCGGCAATTCTAATGGTGGAGGTGGAATTGGTGTTGTT
CAGATGCTTTTTCGGTGCAATATTTTGGCGTTGGTTGGTGGAGGTCCGGAACCTCAATAT
CCCTTGAATAAGGTGATGATATGGGATGATCATCAATCTAGGTGCATCGGCGAGCTATCG
TTTCGATCTGAGGTGAAATCTGTGAGGCTGAGAAGGGATAGAATTGTGGTTGTTTTGGCC
CAGAAGATATTTGTTTACAACTTTTCGGATTTGAAACTGTTACATCAGATTGAGACAGTG
GCGAACCCCAAGGGTTTGTGTGAAGTGTCACAGGTATCGGGATCAATGGTTCTGGTTTGT
CCGGGTCTTCAGAAGGGTCAGGTGAGAGTGGAACATTATGCTTCTAAGAGGACCAAGTTT
ATAATGGCACATGACTCGAGGATTGTGTGTTTTGCGCTTACAAATGATGGGAGGTTGTTG
GCTACTTCTAGCAGTAAAGGGACTCTTGTCAGAATATATAATACTTTAGATGGATCTTTG
GTCCAAGAGGTCAGAAGAGGCGCAGATAGAGCAGAAATTTATAGCCTTGCTTTTTCTCCA
ACTGCACAATGGCTAGCTGTTTCCAGTGATAAAGGAACTGTCCATGTGTTCAATCTAAAG
GTTGATTCAGCAGCTTTAGGAGTTGATAGACCAAGAGGGGCATCTGAGTCAAATGCTACA
TCTCCATCAGCTGGGTCTCATCTCTCCTTCATAAGAGGTGTGCTACCGAAGTATTTCAGC
TCTGAGTGGTCTGTGGCTCAGTTCCGCTTGCAAGAAGGTCTGCAGCACATTGTGGCCTTC
GGTCACCAAAAGAATACGGTTGTGATTCTTGGCATGGATGGCAGTTTCTACCGATGCCAG
TATGATGCAGCAACTGGTGGGGAGATGACCCTGTTGGAACATCATAGTTTCTTGAAGTCC
GAGGAGAACTTCTAA