Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063439
CDS Infomation

pacid=37440154 polypeptide=PGSC0003DMP400042715 locus=PGSC0003DMG400024686 ID=PGSC0003DMT400063439.v4.03 annot-version=v4.03
Sequence

ATGGCAATCATAACTGAAGAACCAGACTCCCGAAGTCCACTGAAACAACGAAAACCCCTT
AAACCCACGTCAAAACCTTCTCAATCAACCTCCCCAAAACCCATTAAATCCACCAAAACT
ACAAATGCGACAAACCCATTTCATTTCTGGTTCTATTTCACCATTTCAGTCTCTCTTGTA
ACCCTCATATTCATGATTTTCACTTCTCTTTACCCGCAAGACCCTAAAACATGGTTTCTT
AGCCTGCCCCTAAATCTACGACAACACTACGCTAAAGGGCGAAATATCAAAGTTCAAACA
GCTCCTAACCAGCAACAAATTGAAGTTTTTGCTATCCAAGAAGGACCATCAAAGTCTTCT
GATCAGGTACTTATTGTACATGGACTAGGATGTAGCTCTTTTGCGTTTCAAAAAGTTGTG
AATTTTTTGGGTGTTAGAGGTGTTCATGCTGTTGCTATCGATCTGCCTGGTTCTGGGTTT
TCGGATAAGACGATGGTTGTGGAGGAAGAGCATGTGGATGATGGGGTTCTAGGGAGGCTT
AAGGATATGTATAATGAAATTCAAGAAAAGGGTATATTTTGGGGGTTTGATCAACTTGTT
GAGCAGGGGTATGTGAACTATGAGGAAAATAAAATCCGGGTTTCGAAAAGAAATGTTGTT
AAGGCTGTTGATTTGGGTCCTGAAGAGATTGGAAAAGTGTTGGGGCAAGTGATTGATACA
ATGGGATTGTCACCTGTGGATTTGGTTTTGCATGATTCAGCATTGGGTTTGACTGCTAAT
TGGGTTTCGGAGAACCGTGGATTGCTTAGAAGTGTGGTGGTTCTAGATAGTGCGCCGACT
GGAACAGCATTGCCATTATGGGTGTTGGAAATGCCAGTGTTAAGGGATGCTGTTTTGGGA
TTGGGATTTGCTTTTAGGAGATTACTTGGAACGTGCTGTTCTAGATCGGTTGGTAACTTG
GAGGCTGAGGGTCATAGGATTCTTTTGAAGGGAAAGGATGGAAGAAGAGCTGTTGTAGGG
ATGGGGAAGAGCCTGAATTGTAGTTTTGATTTGAATGAATGGGCTGCTTTGGATGGAGTG
AAAGGGCTACCAATGCAAGTAATTTGGTCTGATGCCTTGTCCAAGGAGTGGACCGAGGAG
GGACGTCAAGTTGCTGATGCAATCCCTCAGGCAAAATTTGTCAGTCATTCTGGTGGGAGA
TGGCCCCAGGAGCATAATTCTGAGGAGATAGCTGAAAGTATCTATCAATTTGTTTCCTCC
TTGCCGAAGAATGTGAAACAAACTGAAGAACCTGTACCTGAACATGTCCAGAAGATGTTT
GATGAAGTGAAGAGTGGCGATCACCACCACCACCACGGTCATGATAGCCATGGCCACGAG
CATGATCATGGTCATGGACATGCTCATGCCGGATATATGGATGCATATGGGCTTGGTCAA
GAGTGGGCCATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400042715
PEP Infomation

pacid=37440154 transcript=PGSC0003DMT400063439 locus=PGSC0003DMG400024686 ID=PGSC0003DMT400063439.v4.03 annot-version=v4.03
Sequence

MAIITEEPDSRSPLKQRKPLKPTSKPSQSTSPKPIKSTKTTNATNPFHFWFYFTISVSLV
TLIFMIFTSLYPQDPKTWFLSLPLNLRQHYAKGRNIKVQTAPNQQQIEVFAIQEGPSKSS
DQVLIVHGLGCSSFAFQKVVNFLGVRGVHAVAIDLPGSGFSDKTMVVEEEHVDDGVLGRL
KDMYNEIQEKGIFWGFDQLVEQGYVNYEENKIRVSKRNVVKAVDLGPEEIGKVLGQVIDT
MGLSPVDLVLHDSALGLTANWVSENRGLLRSVVVLDSAPTGTALPLWVLEMPVLRDAVLG
LGFAFRRLLGTCCSRSVGNLEAEGHRILLKGKDGRRAVVGMGKSLNCSFDLNEWAALDGV
KGLPMQVIWSDALSKEWTEEGRQVADAIPQAKFVSHSGGRWPQEHNSEEIAESIYQFVSS
LPKNVKQTEEPVPEHVQKMFDEVKSGDHHHHHGHDSHGHEHDHGHGHAHAGYMDAYGLGQ
EWAM*

Transcript Sequence

Transcript ID

PGSC0003DMT400063439
Transcript Infomation

pacid=37440154 locus=PGSC0003DMG400024686 ID=PGSC0003DMT400063439.v4.03 annot-version=v4.03
Sequence

ATGGCAATCATAACTGAAGAACCAGACTCCCGAAGTCCACTGAAACAACGAAAACCCCTT
AAACCCACGTCAAAACCTTCTCAATCAACCTCCCCAAAACCCATTAAATCCACCAAAACT
ACAAATGCGACAAACCCATTTCATTTCTGGTTCTATTTCACCATTTCAGTCTCTCTTGTA
ACCCTCATATTCATGATTTTCACTTCTCTTTACCCGCAAGACCCTAAAACATGGTTTCTT
AGCCTGCCCCTAAATCTACGACAACACTACGCTAAAGGGCGAAATATCAAAGTTCAAACA
GCTCCTAACCAGCAACAAATTGAAGTTTTTGCTATCCAAGAAGGACCATCAAAGTCTTCT
GATCAGGTACTTATTGTACATGGACTAGGATGTAGCTCTTTTGCGTTTCAAAAAGTTGTG
AATTTTTTGGGTGTTAGAGGTGTTCATGCTGTTGCTATCGATCTGCCTGGTTCTGGGTTT
TCGGATAAGACGATGGTTGTGGAGGAAGAGCATGTGGATGATGGGGTTCTAGGGAGGCTT
AAGGATATGTATAATGAAATTCAAGAAAAGGGTATATTTTGGGGGTTTGATCAACTTGTT
GAGCAGGGGTATGTGAACTATGAGGAAAATAAAATCCGGGTTTCGAAAAGAAATGTTGTT
AAGGCTGTTGATTTGGGTCCTGAAGAGATTGGAAAAGTGTTGGGGCAAGTGATTGATACA
ATGGGATTGTCACCTGTGGATTTGGTTTTGCATGATTCAGCATTGGGTTTGACTGCTAAT
TGGGTTTCGGAGAACCGTGGATTGCTTAGAAGTGTGGTGGTTCTAGATAGTGCGCCGACT
GGAACAGCATTGCCATTATGGGTGTTGGAAATGCCAGTGTTAAGGGATGCTGTTTTGGGA
TTGGGATTTGCTTTTAGGAGATTACTTGGAACGTGCTGTTCTAGATCGGTTGGTAACTTG
GAGGCTGAGGGTCATAGGATTCTTTTGAAGGGAAAGGATGGAAGAAGAGCTGTTGTAGGG
ATGGGGAAGAGCCTGAATTGTAGTTTTGATTTGAATGAATGGGCTGCTTTGGATGGAGTG
AAAGGGCTACCAATGCAAGTAATTTGGTCTGATGCCTTGTCCAAGGAGTGGACCGAGGAG
GGACGTCAAGTTGCTGATGCAATCCCTCAGGCAAAATTTGTCAGTCATTCTGGTGGGAGA
TGGCCCCAGGAGCATAATTCTGAGGAGATAGCTGAAAGTATCTATCAATTTGTTTCCTCC
TTGCCGAAGAATGTGAAACAAACTGAAGAACCTGTACCTGAACATGTCCAGAAGATGTTT
GATGAAGTGAAGAGTGGCGATCACCACCACCACCACGGTCATGATAGCCATGGCCACGAG
CATGATCATGGTCATGGACATGCTCATGCCGGATATATGGATGCATATGGGCTTGGTCAA
GAGTGGGCCATGTGA