Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400063401
CDS Infomation

pacid=37459136 polypeptide=PGSC0003DMP400042692 locus=PGSC0003DMG400024662 ID=PGSC0003DMT400063401.v4.03 annot-version=v4.03
Sequence

ATGGGAGAGATCGATACGAAATCAATTGAATCAGTCCACGCTGCACTTTCATTGTTCGGA
GAGAAATCATGTGATCACAAGAAGAAATATAGATCCACTTCATGTATCAATGAGATGGAG
AAAGAAAATGATACAGAAAGTTTGTTGAAATACTTGGCAAACCTCAAAGTTCAACTTGAG
GCGAAGGATTCTGCACACAAGCAAGCACTTCTTAAGCTAGACCATCACGAAAATACAGTT
GATGAGCTATGCACTTTGCTAATGAGCTCTGAACTAGAGAAGGAGATTTACATGATCGAA
TGTAGAGGATTAAGGGTTCATGTACATGAGCTTGAGTCGAGAATTCAGGAGATGGATGAC
CGATTTTTGGAGTCTGTAATGATACGAGAGCAACTCTCACATGCCACCAATGAGTTGAGG
GACACACAAAGAGAACTAGTGGCAGCAAGAGATGCTAAGCTTGAAGCCTTGTCACAAGTA
GAAGTGATGGAAAATTCTTTGAGCACCGAAAAGTTAAAGACTGATGAGCTATCGCGGGAT
GTGTCAAAGCTGAATGAGACTGTTGCGCACTTGAGAATGACTGCTACTAAGGCAGAAGAA
AGCGCTGCGCTTTTGGAATTAGAAGCAGCAAATGCTAAAGAAGAAGTTGTGTTTATGAGA
CATCAATTGGAAATGATGCAGGATTTAGAGAATGAGCTATTGGACAAGTTTGCACTTATT
GATTCAATGAAAGCAGAACTCCAAGAATTGAAAGAACTTCGCGCTTCTTCTGAGGAAGTA
CCTTCAGATGCCGGTGCTAGTGAGATGAAAAAGTTAAATGAAGCTCTCGAATTACAAGAG
AGAAAAAATTGGGATCAGTCCGGTTATATCAGTCTATTGGAATCAGAACTCAGGCAATTA
AAAGGGGAACTGAACAAAGCCAACGAAGAGTCTATTCGTGCCAATGCAGACTTCGGAACA
ATTAACATTGAGCTGGAGCAGATTAAAAAGGAAATGATTGAGACTAGAGAAAAGGAATCA
GAAGCACAAGTTGAGATCACATTCCTAAAATCCGAGCTTCACAAAGGGAAGTCGAAAATT
TCAGCATCAGAGGTTACTGATTCAGTAGCCAAGAGTGAGAAATCAGCTTTACATCTCGCA
TTACAGCAGCTGGCCTTAGAGGCTGAAGAGGCTAAAAATGAAAACAGGAGGTTGAAAGAA
ACCGGTAAGGCATCAGAAGAGGGAAAAGTAGAGGCTAAGGCCTATATGACAATACCAAAG
GAGGAGTATGATCAGTTACATGATGAACCAAATGAAATTCAAGTACTGAAGAAAGAACTA
AAAACAGCAACAGTGAAAATTAACGAGTTGAGGACGAGAGCTGAGCAGGCGATAAGCAGA
GCTGAGGCAGCTGAAAAGGGTAAATCAGCACTTGAAAATCAGATAAAGAGATGGAAGGAA
CATAAAGAGAGAAAAAAGGCTGCATTAGCAGCACTTAGAGAGGAGTCCATTTCCAGAGAA
ATCACTGAATACAAATATGATACTTCTCCGAAAACACTACAACCTCTTGGTAAGGTTCTC
AAGATGAAGTTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400042692
PEP Infomation

pacid=37459136 transcript=PGSC0003DMT400063401 locus=PGSC0003DMG400024662 ID=PGSC0003DMT400063401.v4.03 annot-version=v4.03
Sequence

MGEIDTKSIESVHAALSLFGEKSCDHKKKYRSTSCINEMEKENDTESLLKYLANLKVQLE
AKDSAHKQALLKLDHHENTVDELCTLLMSSELEKEIYMIECRGLRVHVHELESRIQEMDD
RFLESVMIREQLSHATNELRDTQRELVAARDAKLEALSQVEVMENSLSTEKLKTDELSRD
VSKLNETVAHLRMTATKAEESAALLELEAANAKEEVVFMRHQLEMMQDLENELLDKFALI
DSMKAELQELKELRASSEEVPSDAGASEMKKLNEALELQERKNWDQSGYISLLESELRQL
KGELNKANEESIRANADFGTINIELEQIKKEMIETREKESEAQVEITFLKSELHKGKSKI
SASEVTDSVAKSEKSALHLALQQLALEAEEAKNENRRLKETGKASEEGKVEAKAYMTIPK
EEYDQLHDEPNEIQVLKKELKTATVKINELRTRAEQAISRAEAAEKGKSALENQIKRWKE
HKERKKAALAALREESISREITEYKYDTSPKTLQPLGKVLKMKF*

Transcript Sequence

Transcript ID

PGSC0003DMT400063401
Transcript Infomation

pacid=37459136 locus=PGSC0003DMG400024662 ID=PGSC0003DMT400063401.v4.03 annot-version=v4.03
Sequence

ATGGGAGAGATCGATACGAAATCAATTGAATCAGTCCACGCTGCACTTTCATTGTTCGGA
GAGAAATCATGTGATCACAAGAAGAAATATAGATCCACTTCATGTATCAATGAGATGGAG
AAAGAAAATGATACAGAAAGTTTGTTGAAATACTTGGCAAACCTCAAAGTTCAACTTGAG
GCGAAGGATTCTGCACACAAGCAAGCACTTCTTAAGCTAGACCATCACGAAAATACAGTT
GATGAGCTATGCACTTTGCTAATGAGCTCTGAACTAGAGAAGGAGATTTACATGATCGAA
TGTAGAGGATTAAGGGTTCATGTACATGAGCTTGAGTCGAGAATTCAGGAGATGGATGAC
CGATTTTTGGAGTCTGTAATGATACGAGAGCAACTCTCACATGCCACCAATGAGTTGAGG
GACACACAAAGAGAACTAGTGGCAGCAAGAGATGCTAAGCTTGAAGCCTTGTCACAAGTA
GAAGTGATGGAAAATTCTTTGAGCACCGAAAAGTTAAAGACTGATGAGCTATCGCGGGAT
GTGTCAAAGCTGAATGAGACTGTTGCGCACTTGAGAATGACTGCTACTAAGGCAGAAGAA
AGCGCTGCGCTTTTGGAATTAGAAGCAGCAAATGCTAAAGAAGAAGTTGTGTTTATGAGA
CATCAATTGGAAATGATGCAGGATTTAGAGAATGAGCTATTGGACAAGTTTGCACTTATT
GATTCAATGAAAGCAGAACTCCAAGAATTGAAAGAACTTCGCGCTTCTTCTGAGGAAGTA
CCTTCAGATGCCGGTGCTAGTGAGATGAAAAAGTTAAATGAAGCTCTCGAATTACAAGAG
AGAAAAAATTGGGATCAGTCCGGTTATATCAGTCTATTGGAATCAGAACTCAGGCAATTA
AAAGGGGAACTGAACAAAGCCAACGAAGAGTCTATTCGTGCCAATGCAGACTTCGGAACA
ATTAACATTGAGCTGGAGCAGATTAAAAAGGAAATGATTGAGACTAGAGAAAAGGAATCA
GAAGCACAAGTTGAGATCACATTCCTAAAATCCGAGCTTCACAAAGGGAAGTCGAAAATT
TCAGCATCAGAGGTTACTGATTCAGTAGCCAAGAGTGAGAAATCAGCTTTACATCTCGCA
TTACAGCAGCTGGCCTTAGAGGCTGAAGAGGCTAAAAATGAAAACAGGAGGTTGAAAGAA
ACCGGTAAGGCATCAGAAGAGGGAAAAGTAGAGGCTAAGGCCTATATGACAATACCAAAG
GAGGAGTATGATCAGTTACATGATGAACCAAATGAAATTCAAGTACTGAAGAAAGAACTA
AAAACAGCAACAGTGAAAATTAACGAGTTGAGGACGAGAGCTGAGCAGGCGATAAGCAGA
GCTGAGGCAGCTGAAAAGGGTAAATCAGCACTTGAAAATCAGATAAAGAGATGGAAGGAA
CATAAAGAGAGAAAAAAGGCTGCATTAGCAGCACTTAGAGAGGAGTCCATTTCCAGAGAA
ATCACTGAATACAAATATGATACTTCTCCGAAAACACTACAACCTCTTGGTAAGGTTCTC
AAGATGAAGTTCTAG